| Matrix_113 | ABI5 | Not available | Upstream | -156 |
| Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -160 |
| Matrix_122 | ABF1;AREB2 | Not available | Upstream | -158 |
| Matrix_129 | ABF1 | Not available | Upstream | -157 |
| Matrix_145 | GBF4;AT5G44080 | Not available | Upstream | -156 |
| Matrix_156 | POC1 | Not available | Upstream | -156 |
| Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -156 |
| Matrix_264 | ATAREB1 | Not available | Upstream | -157 |
| Matrix_278 | AtbZIP44 | Not available | Upstream | -101 |
| Matrix_296 | GBF2 | Not available | Upstream | -100 |
| Matrix_332 | SPT;ALC | Not available | Upstream | -156 |
| Matrix_356 | PRR5 | Not available | Upstream | -164 |
| Matrix_403 | BZR1 | Not available | Upstream | -159 |
| Matrix_438 | AtbZIP63 | Not available | Upstream | -100 |
| Matrix_456 | bZIP60 | Not available | Upstream | -100 |
| Matrix_488 | ABF1 | Not available | Upstream | -108 |
| Matrix_53 | MYC3 | Not available | Upstream | -155 |
| Matrix_55 | PIF3 | Not available | Upstream | -158 |
| Matrix_56 | BZIP17;BZIP28;BZIP49 | Not available | Upstream | -99 |
| Matrix_7 | PIF4 | Not available | Upstream | -155 |
| Matrix_77 | PRR5 | Not available | Upstream | -159 |
| Motif_200 | GBOXLERBCS | G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF | Upstream | -156 |
| Motif_291 | ABFs binding site motif | Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element | Upstream | -155 |
| Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -155 |
| Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -101 |
| Motif_638 | ABRE binding site motif | Not available | Upstream | -155 |
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