PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_556
Name: INTRONUPPER
Description: 5' exon-intron splice junctions of plant introns; Plant intron upper sequence; Consensus sequence for plant introns

#Associated genes: 134
#Associated gene families: 99

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000001	7584	3	29	217	206	339	214	194	231	60	317	0	200	246	334	257	445	260	130	679	269	316	0	267	19	298	300	262	261	285	264	205	274	235
HOM03D000003	5194	1	29	164	155	111	274	119	132	138	132	0	149	141	208	140	378	236	93	304	303	236	0	162	95	132	257	154	183	171	134	150	135	208
HOM03D000006	4746	2	31	109	98	110	148	109	92	93	87	13	108	236	311	151	290	205	84	422	150	249	4	173	110	186	252	121	134	183	139	89	152	138
HOM03D000012	2924	1	31	78	71	94	113	66	55	27	55	3	79	108	175	92	198	139	60	199	108	137	5	78	51	94	124	96	116	161	87	65	111	79
HOM03D000014	2794	1	31	70	74	102	118	93	76	68	57	1	79	73	97	66	187	99	45	170	104	135	1	148	65	71	117	75	105	127	77	71	77	146
HOM03D000019	2243	1	30	77	83	51	112	53	50	51	51	1	84	62	82	74	159	74	43	121	68	119	0	60	48	77	124	79	80	90	65	75	70	60
HOM03D000021	2196	2	29	96	88	49	111	62	57	41	57	0	86	69	54	74	134	95	26	144	79	85	0	82	38	68	123	56	69	87	59	73	51	83
HOM03D000029	1996	1	31	58	57	30	120	37	51	55	45	1	56	46	69	44	160	106	39	132	94	90	1	63	33	52	92	54	73	84	49	58	53	94
HOM03D000042	1637	1	29	49	47	37	75	59	39	38	42	0	44	50	58	43	128	74	27	90	59	77	0	68	17	52	65	46	76	80	48	44	45	60
HOM03D000050	1497	1	31	46	54	43	59	41	31	33	27	7	48	41	105	35	92	53	21	71	49	71	2	59	20	42	62	46	60	72	51	44	59	53
HOM03D000057	1388	2	31	53	50	34	77	33	35	33	33	8	47	35	46	34	90	61	28	88	49	41	1	45	29	58	63	32	50	53	35	50	40	57
HOM03D000072	1211	1	29	30	33	37	36	57	20	22	31	0	25	26	105	44	67	57	16	37	47	62	0	42	22	43	77	32	29	58	44	20	42	50
HOM03D000085	1067	1	30	22	24	31	35	22	23	11	24	8	23	31	56	28	55	37	19	110	41	40	0	54	9	39	58	31	30	37	34	23	68	44
HOM03D000086	1066	2	29	30	32	29	49	25	28	30	38	0	31	27	38	26	74	53	13	93	43	43	0	29	27	27	45	26	36	42	30	32	28	42
HOM03D000093	1044	2	31	40	34	17	57	27	22	21	20	2	37	22	57	38	47	43	13	70	30	76	1	49	12	25	42	25	26	57	36	32	27	39
HOM03D000096	1015	4	31	34	26	23	53	18	26	26	25	1	30	26	29	26	71	49	16	57	41	36	1	37	44	29	53	30	41	33	31	29	32	42
HOM03D000101	976	2	31	29	33	22	63	23	25	27	25	29	31	24	25	20	65	43	21	74	33	37	5	33	28	23	38	25	29	29	20	32	23	42
HOM03D000114	828	2	29	29	28	14	45	20	26	26	20	0	28	20	26	17	67	44	15	47	35	33	0	29	18	19	39	23	27	29	21	29	25	29
HOM03D000116	819	1	31	26	24	13	37	20	24	25	20	1	24	28	30	22	67	33	21	34	36	38	1	23	28	24	45	23	24	25	24	25	24	30
HOM03D000122	802	1	29	33	28	14	51	13	28	28	21	0	28	23	26	19	62	43	18	44	36	25	0	31	2	22	33	19	22	24	20	27	23	39
HOM03D000133	749	2	29	22	23	17	34	17	23	22	16	0	21	19	46	27	49	31	17	36	32	26	0	26	27	21	37	21	21	21	15	24	29	29
HOM03D000137	735	1	31	17	16	21	21	24	16	24	23	12	16	20	40	28	54	29	5	44	17	53	1	17	15	23	34	19	28	33	20	15	36	14
HOM03D000141	729	1	31	23	22	24	34	21	18	19	22	13	23	21	18	20	48	37	16	35	29	27	13	23	20	17	30	19	23	24	18	24	20	28
HOM03D000145	721	1	30	22	21	33	33	18	15	16	15	5	22	21	25	18	36	27	11	60	29	31	0	31	16	21	38	19	23	25	19	22	20	29
HOM03D000156	657	2	30	6	12	60	5	10	2	3	7	3	9	6	9	31	116	27	5	54	5	9	0	14	2	40	48	10	68	45	11	19	8	13
HOM03D000158	654	1	31	20	24	15	46	11	21	19	16	5	24	18	18	16	48	33	7	32	28	31	4	21	9	14	29	16	23	22	17	24	14	29
HOM03D000165	617	1	31	15	17	13	29	16	16	17	15	26	16	15	16	17	46	30	10	40	22	24	1	19	17	17	31	16	16	15	18	15	20	32
HOM03D000184	556	1	31	23	21	9	30	11	10	10	22	3	20	13	12	11	40	25	10	20	15	30	1	20	7	13	23	12	28	34	13	21	22	27
HOM03D000219	474	1	27	22	25	1	14	3	18	14	5	0	31	28	26	13	23	19	16	12	17	75	0	0	6	50	17	19	2	4	5	5	4	0
HOM03D000261	424	1	31	10	11	7	23	8	11	10	10	4	11	11	14	10	32	28	9	10	22	24	1	16	14	8	21	11	22	13	15	10	13	15
HOM03D000275	413	1	31	13	11	7	18	8	9	9	8	3	10	17	15	9	22	17	9	20	29	15	1	15	10	16	27	13	16	19	9	12	12	14
HOM03D000332	354	1	28	10	12	5	18	8	12	12	8	0	12	10	10	6	25	21	4	23	19	11	0	15	0	9	19	11	11	11	9	12	10	21
HOM03D000335	353	1	29	12	10	8	14	9	9	8	10	0	10	10	9	9	31	21	6	23	16	17	0	16	2	10	18	10	11	11	10	10	7	16
HOM03D000341	348	1	31	14	13	6	20	9	11	9	8	2	10	8	8	7	24	18	4	26	12	11	1	17	13	6	13	9	9	11	9	9	6	25
HOM03D000354	343	3	29	14	14	5	25	11	12	12	6	0	13	7	12	11	28	12	3	18	13	11	0	12	3	8	12	7	13	14	6	14	8	19
HOM03D000374	331	1	29	8	9	7	16	7	8	8	11	0	9	11	7	10	26	18	2	17	17	10	0	13	2	11	20	14	12	13	10	8	10	17
HOM03D000381	324	1	29	10	9	6	16	6	11	13	6	0	9	9	8	11	27	18	6	16	18	11	0	10	10	9	19	11	11	10	9	8	6	11
HOM03D000397	313	1	30	14	13	5	30	6	8	8	7	1	12	7	9	9	13	20	2	21	12	7	0	14	2	8	11	7	9	11	8	14	6	19
HOM03D000402	311	1	31	10	6	5	10	4	7	6	5	9	5	6	13	5	18	12	6	14	10	13	3	7	54	5	11	22	7	7	5	9	8	9
HOM03D000417	300	1	29	10	10	5	17	5	8	8	8	0	10	6	9	10	18	17	9	22	13	13	0	8	4	8	12	8	11	13	8	10	8	12
HOM03D000427	295	1	30	6	8	6	15	11	7	8	7	6	10	7	9	7	25	15	5	9	9	13	0	11	10	8	8	6	13	16	11	10	8	11
HOM03D000436	287	1	31	6	8	12	8	8	5	5	5	7	8	7	11	4	21	8	6	13	7	19	3	9	9	5	14	6	14	25	7	6	13	8
HOM03D000451	280	1	30	8	6	8	12	10	4	6	8	1	8	7	5	10	26	10	9	14	11	24	0	7	5	7	12	5	10	17	9	7	9	5
HOM03D000462	275	1	30	8	9	7	19	11	6	7	9	1	9	7	7	7	25	10	4	9	9	11	0	11	6	6	15	6	8	8	7	9	9	15
HOM03D000486	264	1	30	6	8	4	18	14	6	8	5	4	8	11	25	7	8	10	3	22	9	7	0	3	6	5	12	8	4	12	9	8	7	7
HOM03D000489	263	1	29	9	10	6	15	10	6	6	8	0	10	6	12	8	20	14	4	14	10	8	0	9	1	7	11	7	9	10	6	10	5	12
HOM03D000520	250	1	30	9	11	5	14	4	7	7	8	1	9	7	9	4	19	11	5	14	19	6	0	10	5	6	10	7	7	6	6	8	4	12
HOM03D000528	248	1	29	4	8	5	17	5	8	8	9	0	9	6	5	5	26	9	3	14	9	12	0	7	4	6	12	7	8	7	6	9	7	13
HOM03D000533	246	1	31	13	9	5	14	6	5	5	6	1	9	5	6	5	16	13	2	11	10	8	1	11	5	5	10	7	11	9	6	9	7	16
HOM03D000546	241	1	13	0	1	0	0	2	0	11	0	0	0	0	0	7	0	0	1	1	0	7	0	186	0	0	0	1	4	1	17	0	2	0
HOM03D000563	236	2	31	8	8	4	14	4	8	5	7	2	8	8	7	6	14	14	6	15	5	7	1	8	3	5	9	7	8	9	7	7	5	17
HOM03D000582	230	1	29	9	10	4	15	4	8	8	5	0	9	6	6	5	20	13	5	9	10	11	0	5	2	5	10	5	8	10	5	9	5	9
HOM03D000589	229	2	29	4	4	5	8	1	12	14	5	0	3	4	9	2	8	8	10	10	6	7	0	10	23	2	5	7	16	8	3	3	17	15
HOM03D000596	228	1	29	6	6	5	11	6	8	5	8	0	6	7	6	6	17	12	4	12	13	7	1	8	0	6	12	6	9	8	7	6	7	13
HOM03D000645	212	1	29	7	7	8	12	4	5	5	6	0	9	5	4	5	14	8	5	8	8	8	0	10	6	6	9	8	9	9	5	7	5	10
HOM03D000803	175	2	28	3	3	3	6	5	6	5	6	0	3	6	7	4	19	14	3	2	8	11	0	6	0	9	6	6	7	7	7	3	4	6
HOM03D000965	154	2	28	6	6	3	11	2	6	5	4	0	6	4	5	4	9	10	2	12	6	5	0	4	0	2	7	4	6	5	4	6	4	6
HOM03D001101	138	1	29	4	4	2	7	5	6	4	3	0	4	3	3	3	10	7	1	8	6	2	0	3	5	3	10	6	4	6	4	4	4	7
HOM03D001104	138	1	30	2	5	1	7	6	6	5	3	1	2	11	6	5	2	6	0	1	11	2	1	4	2	1	6	9	6	11	7	4	2	3
HOM03D001141	134	1	31	4	4	2	6	4	3	2	3	2	4	3	4	3	6	7	6	14	4	6	1	5	3	3	7	4	4	4	4	3	4	5
HOM03D001144	134	1	28	4	4	1	10	2	5	4	2	0	4	3	5	1	24	9	1	4	4	7	0	5	0	2	5	2	3	5	3	4	1	10
HOM03D001290	120	1	29	1	1	4	3	1	3	6	1	0	2	2	1	2	30	3	4	7	1	22	0	1	3	1	6	2	2	7	1	1	1	1
HOM03D001351	115	1	31	4	5	2	6	2	2	2	3	3	7	3	5	1	8	5	3	3	4	5	2	3	3	2	6	3	3	2	3	4	5	6
HOM03D001614	101	1	30	3	2	3	3	3	2	2	3	1	2	4	3	4	7	4	1	6	5	3	0	3	4	4	5	3	4	4	2	3	3	5
HOM03D001657	99	1	31	3	3	2	6	2	2	2	2	1	4	2	3	5	5	3	2	11	2	2	1	3	2	3	5	4	3	3	2	4	3	4
HOM03D001739	95	5	31	4	3	2	4	2	2	3	3	1	2	2	4	3	4	4	1	7	4	4	1	3	6	2	4	2	3	5	3	2	2	3
HOM03D001885	90	1	29	4	3	2	4	3	2	3	2	1	2	2	3	3	8	5	0	5	4	4	0	1	3	3	4	2	4	3	2	2	3	3
HOM03D001886	90	1	29	3	3	1	3	3	2	2	2	0	3	3	3	2	10	3	5	4	2	10	0	2	3	2	4	2	2	2	2	2	2	3
HOM03D002022	84	1	31	3	2	2	5	2	1	2	2	1	2	2	2	3	8	3	3	7	3	2	1	3	3	2	4	2	2	2	3	2	2	3
HOM03D002068	83	2	30	3	4	2	5	2	2	2	2	1	3	2	1	1	5	4	0	9	4	1	1	2	7	2	2	3	2	2	2	3	2	2
HOM03D002188	79	1	29	3	3	2	2	2	2	2	2	0	3	3	3	3	4	5	2	3	4	2	0	4	1	2	3	2	3	5	2	2	2	3
HOM03D002198	79	1	30	2	2	2	3	2	2	2	2	1	2	2	2	2	6	2	1	4	2	3	0	4	6	2	5	2	2	4	2	2	2	4
HOM03D002281	77	1	31	2	2	2	3	2	2	2	2	2	2	2	7	2	4	3	2	2	2	3	2	2	4	2	3	2	2	2	2	2	2	4
HOM03D002329	76	1	27	2	2	5	5	2	3	3	4	0	2	2	2	2	4	6	0	6	3	2	0	1	0	2	4	1	2	2	2	2	3	2
HOM03D002370	75	2	31	1	2	4	3	1	1	3	3	1	2	1	2	1	7	4	2	2	3	2	1	2	4	1	2	1	2	2	1	2	1	11
HOM03D002569	70	1	30	2	2	2	4	1	1	1	3	2	2	1	1	2	4	3	0	7	3	2	1	3	3	2	2	1	2	2	2	3	2	4
HOM03D002583	70	1	28	1	2	2	2	2	2	2	2	0	2	2	2	2	7	3	0	4	2	5	0	2	5	3	3	1	2	2	2	2	2	2
HOM03D002600	70	1	27	1	1	1	3	3	3	3	1	0	1	2	3	2	8	5	0	4	3	4	0	1	0	2	4	2	3	3	2	1	2	2
HOM03D002751	66	1	29	2	2	1	3	1	2	2	2	0	2	1	2	1	5	3	1	6	3	2	0	2	3	1	1	3	4	4	1	2	1	3
HOM03D002874	63	1	28	1	1	1	2	2	3	2	2	0	1	2	4	2	6	4	1	5	4	4	0	1	0	2	3	2	1	1	2	1	2	1
HOM03D002957	61	1	28	4	4	1	4	1	3	1	1	0	3	1	2	2	3	2	1	2	3	1	0	1	2	2	2	2	2	4	3	3	1	0
HOM03D003146	57	1	31	2	2	1	2	1	1	1	1	1	2	1	2	1	5	2	1	8	1	2	1	2	4	1	2	1	1	1	1	2	3	1
HOM03D003185	57	1	27	2	2	0	4	2	2	2	1	0	2	1	1	1	4	4	2	2	3	2	0	3	0	1	2	2	2	1	1	2	1	5
HOM03D003469	53	1	27	1	1	2	3	1	1	1	1	0	1	1	1	1	4	3	0	2	5	3	0	2	0	1	5	3	1	1	2	1	2	3
HOM03D003520	52	1	30	1	1	1	2	4	1	1	2	2	1	1	1	1	4	1	1	3	2	2	0	1	4	2	2	1	1	1	1	1	4	2
HOM03D003619	51	2	29	1	1	1	1	1	1	1	1	2	1	1	1	1	5	1	0	8	1	0	2	2	3	2	1	1	2	3	1	2	1	2
HOM03D003694	50	1	31	1	1	1	2	1	2	2	2	2	1	1	1	1	2	2	1	4	3	2	2	2	1	1	2	1	1	1	1	1	1	4
HOM03D003824	49	1	26	2	1	2	1	1	0	2	1	1	0	1	3	1	1	6	1	1	2	1	0	4	1	0	2	2	3	2	1	0	3	3
HOM03D004071	47	1	28	1	1	1	2	1	2	2	1	0	1	2	1	1	4	3	3	1	3	3	0	1	0	1	2	1	1	1	1	1	1	4
HOM03D004118	46	3	21	0	0	2	0	2	2	2	2	0	0	2	2	2	5	2	1	3	3	2	0	0	0	2	3	2	2	1	2	0	2	0
HOM03D004380	45	1	29	1	1	1	1	2	1	1	1	0	1	4	1	1	3	3	1	1	1	2	0	4	1	1	2	1	2	2	2	1	1	1
HOM03D004411	45	1	29	1	1	1	1	1	1	1	1	0	1	1	1	1	2	1	0	2	2	1	3	1	2	1	3	2	4	4	1	1	1	2
HOM03D004483	44	1	28	1	1	2	1	1	0	2	1	0	1	1	1	1	3	2	1	5	1	1	0	2	2	1	1	1	2	1	1	1	1	5
HOM03D005408	39	1	27	1	1	1	2	1	1	0	2	0	1	1	1	2	2	3	0	1	1	1	0	2	2	1	2	1	1	1	1	1	1	4
HOM03D005409	39	6	18	0	2	1	1	1	1	1	0	1	0	0	0	0	3	1	0	2	0	0	0	1	1	0	0	2	4	6	0	1	4	6
HOM03D005845	37	1	16	0	2	7	1	2	1	5	0	0	0	0	0	1	2	0	0	1	0	0	0	2	2	0	0	1	4	4	0	0	1	1
HOM03D006488	34	2	28	2	1	1	2	1	1	1	1	0	1	1	1	1	2	1	1	2	1	0	0	1	2	1	2	1	1	1	1	1	1	1
HOM03D006503	34	1	31	1	1	1	2	1	1	1	1	1	1	1	1	1	2	1	1	1	1	1	1	1	1	2	1	1	1	1	1	1	1	1
HOM03D007319	29	1	25	1	1	1	1	1	1	1	1	0	1	1	1	1	2	1	0	0	2	1	0	1	0	1	2	1	0	1	1	1	1	2