PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_521
Name: RBCSBOX3PS
Description: rbcS box III; 5' upstream region (-114) of pea rbcS gene; binding with trans factor GT-1; one of GT-1 boxes

#Associated genes: 9
#Associated gene families: 7

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000003	5194	1	29	164	155	111	274	119	132	138	132	0	149	141	208	140	378	236	93	304	303	236	0	162	95	132	257	154	183	171	134	150	135	208
HOM03D000006	4746	1	31	109	98	110	148	109	92	93	87	13	108	236	311	151	290	205	84	422	150	249	4	173	110	186	252	121	134	183	139	89	152	138
HOM03D000023	2177	2	29	76	55	104	68	42	45	53	63	0	52	69	73	59	127	68	35	188	71	135	0	64	21	65	88	77	97	126	61	52	88	55
HOM03D000031	1978	1	29	59	63	27	125	36	62	61	35	0	67	51	55	55	238	112	28	71	87	135	0	36	17	66	80	17	80	103	62	53	44	53
HOM03D000974	152	2	29	5	5	4	4	4	4	3	4	0	4	4	5	4	12	9	3	9	7	5	0	7	3	3	7	4	5	4	5	4	4	11
HOM03D005948	36	1	26	1	1	1	4	1	2	2	1	0	1	1	1	1	2	2	1	0	2	2	0	0	0	1	1	1	1	1	1	1	1	2
HOM03D007157	30	1	26	1	1	1	1	2	0	1	1	0	1	1	1	0	2	1	1	1	1	1	0	2	1	1	2	1	1	1	1	0	1	1