PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_344
Name: MSACRCYM
Description: MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58

#Associated genes: 96
#Associated gene families: 53

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000021	2196	1	29	96	88	49	111	62	57	41	57	0	86	69	54	74	134	95	26	144	79	85	0	82	38	68	123	56	69	87	59	73	51	83
HOM03D000024	2160	2	31	70	64	45	98	53	50	65	77	37	64	57	64	59	165	94	34	142	74	73	15	53	88	55	97	52	66	70	52	72	71	84
HOM03D000045	1603	1	29	37	34	46	50	28	37	37	43	0	35	44	84	50	116	73	32	113	72	71	0	60	44	47	95	47	52	57	42	32	40	85
HOM03D000096	1015	1	31	34	26	23	53	18	26	26	25	1	30	26	29	26	71	49	16	57	41	36	1	37	44	29	53	30	41	33	31	29	32	42
HOM03D000101	976	1	31	29	33	22	63	23	25	27	25	29	31	24	25	20	65	43	21	74	33	37	5	33	28	23	38	25	29	29	20	32	23	42
HOM03D000116	819	1	31	26	24	13	37	20	24	25	20	1	24	28	30	22	67	33	21	34	36	38	1	23	28	24	45	23	24	25	24	25	24	30
HOM03D000119	809	1	30	21	24	23	39	14	20	21	20	1	19	20	17	22	68	37	16	48	29	50	0	29	18	18	41	18	26	31	20	30	28	41
HOM03D000143	727	1	31	27	21	20	32	16	17	19	23	23	25	17	21	22	43	26	9	53	25	22	19	19	34	17	34	20	17	16	19	22	17	32
HOM03D000175	582	8	31	23	23	6	36	11	15	15	14	4	20	15	13	13	37	20	7	44	16	28	4	21	12	14	26	12	25	30	18	19	13	28
HOM03D000200	511	1	29	18	18	7	36	7	18	18	9	0	16	13	19	11	39	30	9	24	19	18	0	26	2	12	25	12	16	14	12	18	10	35
HOM03D000259	425	1	29	16	13	11	24	10	12	12	10	0	13	10	13	12	26	19	7	24	18	40	0	17	8	9	18	9	12	12	9	11	7	23
HOM03D000264	420	1	31	15	12	6	19	10	13	13	12	1	15	12	13	16	31	16	2	46	16	16	1	10	4	14	18	11	11	14	13	14	9	17
HOM03D000284	400	1	31	14	15	17	23	9	10	10	8	2	12	11	9	8	23	18	8	45	16	11	3	8	11	9	15	8	12	13	8	14	9	21
HOM03D000294	389	1	31	5	12	8	20	8	9	9	10	3	13	14	13	11	32	15	11	35	14	18	2	11	10	9	17	9	11	11	9	10	13	17
HOM03D000307	378	1	29	9	9	4	14	9	12	14	9	0	8	12	22	8	28	22	2	38	13	13	0	11	3	8	20	9	14	20	7	7	15	18
HOM03D000314	371	7	30	16	15	14	21	7	10	12	8	0	14	9	10	9	27	18	5	21	12	13	2	14	6	9	15	11	12	13	9	14	7	18
HOM03D000377	327	2	31	9	8	9	14	8	7	6	6	32	7	5	7	11	20	16	5	13	10	16	2	11	13	7	12	6	14	15	8	6	7	17
HOM03D000387	322	1	31	35	25	2	27	3	3	4	8	1	19	3	5	10	10	11	2	10	4	44	2	4	10	3	11	6	16	14	5	16	3	6
HOM03D000404	310	2	31	12	9	7	18	11	7	8	7	4	9	14	6	7	15	19	9	21	9	8	4	8	10	7	15	7	10	10	9	9	7	14
HOM03D000432	291	1	31	11	10	9	13	6	4	5	9	2	9	7	9	6	19	13	8	22	7	17	5	5	13	12	13	6	8	8	8	7	12	8
HOM03D000466	271	1	29	7	7	4	14	5	6	6	5	0	7	7	5	4	18	12	9	19	9	10	0	8	14	6	10	5	13	23	6	6	12	14
HOM03D000558	237	3	29	1	8	5	10	10	8	6	6	2	1	2	4	9	10	3	3	16	5	13	0	27	0	4	3	13	11	12	6	8	7	24
HOM03D000638	214	2	31	8	8	3	16	5	5	5	5	3	8	4	5	4	13	11	8	10	6	7	3	8	9	4	9	6	5	6	4	9	6	11
HOM03D000814	173	2	29	6	5	3	11	4	4	4	5	0	6	5	6	4	14	11	4	4	6	8	0	7	6	5	8	4	5	5	4	6	4	9
HOM03D000877	165	1	29	4	5	5	11	4	4	4	5	0	5	5	3	4	14	10	3	5	7	9	0	2	2	5	9	8	8	7	6	5	5	1
HOM03D000974	152	1	29	5	5	4	4	4	4	3	4	0	4	4	5	4	12	9	3	9	7	5	0	7	3	3	7	4	5	4	5	4	4	11
HOM03D001086	140	1	29	3	3	4	7	3	4	4	3	0	3	4	3	2	8	5	2	14	6	4	0	6	5	4	10	4	3	3	4	5	3	11
HOM03D001208	127	1	31	8	4	2	6	3	4	4	2	2	5	4	4	3	11	8	2	7	5	5	1	2	1	3	6	3	4	4	3	3	3	5
HOM03D001429	111	1	28	2	2	1	6	2	6	6	4	0	3	3	3	4	10	7	1	6	6	5	0	3	0	3	6	3	4	5	3	1	2	4
HOM03D001564	104	1	31	3	4	1	9	2	2	2	4	3	4	2	2	2	6	5	3	6	4	3	2	6	3	2	4	2	3	2	3	4	2	4
HOM03D001659	99	1	30	4	4	1	5	2	2	2	1	2	4	0	1	3	5	8	1	7	3	3	1	3	6	2	3	2	6	7	3	3	2	3
HOM03D001820	92	3	26	2	2	2	2	3	3	3	3	0	2	3	4	3	10	6	4	8	4	4	0	0	0	3	6	3	2	3	3	2	2	0
HOM03D001897	89	6	29	3	3	1	7	4	3	3	2	0	3	2	4	2	6	3	1	4	3	4	0	3	3	2	4	2	3	4	2	3	2	3
HOM03D002137	80	2	28	3	2	2	4	1	2	2	2	0	3	2	1	2	6	3	5	13	2	3	0	1	0	2	7	2	1	1	2	2	3	1
HOM03D002450	73	1	29	1	1	2	1	1	2	2	2	0	1	2	2	2	6	2	3	9	3	2	0	2	9	2	2	2	2	2	2	1	3	2
HOM03D002456	73	2	29	2	2	1	4	2	3	3	2	1	2	2	2	2	3	3	0	9	3	3	1	1	3	2	4	2	2	2	2	2	0	3
HOM03D002537	71	1	31	2	2	2	5	2	2	2	1	2	2	1	2	2	4	1	2	6	1	2	2	3	2	2	3	2	1	1	1	4	2	5
HOM03D002555	71	3	28	1	2	2	1	1	1	1	2	0	2	3	1	3	2	6	0	2	3	1	0	2	2	2	4	2	10	2	3	2	5	3
HOM03D002899	63	1	24	3	3	1	6	1	2	2	2	0	2	2	1	1	5	5	0	7	2	3	0	0	0	1	3	1	3	2	2	3	0	0
HOM03D002986	61	1	25	2	1	1	0	2	0	0	1	0	4	3	2	2	4	4	1	6	2	2	0	2	0	2	2	1	4	4	2	2	2	3
HOM03D003056	59	1	20	0	0	2	0	0	0	1	2	0	0	2	9	3	5	2	0	2	3	3	0	2	0	2	3	4	2	4	2	0	1	5
HOM03D003154	57	1	29	2	2	1	2	1	1	1	1	1	1	1	1	6	3	2	0	2	1	5	0	2	5	1	2	1	3	3	1	2	1	2
HOM03D003296	55	1	28	1	1	1	2	1	4	4	3	0	1	1	2	2	4	1	0	2	1	1	0	1	2	2	1	1	4	5	1	1	2	3
HOM03D003502	52	1	31	3	2	2	2	1	1	1	1	3	2	1	1	1	7	1	1	3	1	1	3	1	2	1	2	1	1	1	1	2	1	1
HOM03D003777	49	2	30	1	1	1	3	1	1	1	1	1	1	1	1	1	4	2	1	7	2	3	0	1	2	1	3	1	1	1	1	1	1	2
HOM03D003969	48	7	24	3	2	1	3	1	1	1	1	0	2	1	1	1	4	4	0	9	2	2	0	0	0	1	2	1	1	1	1	2	0	0
HOM03D004130	46	1	31	1	1	2	1	1	1	2	2	2	1	1	1	1	2	2	1	3	2	1	2	1	2	1	1	1	2	2	1	1	3	1
HOM03D004818	42	2	30	1	1	1	1	2	1	2	1	3	1	0	2	1	2	2	1	3	2	1	1	1	1	1	2	1	2	1	1	1	1	1
HOM03D005346	39	1	30	1	1	1	2	1	1	1	1	1	1	1	1	1	2	1	0	4	1	1	1	3	2	1	2	1	1	1	1	1	1	1
HOM03D005406	39	5	26	2	1	1	2	1	1	1	1	0	1	1	1	1	4	3	0	3	2	2	0	1	0	0	2	1	1	1	1	1	1	2
HOM03D005989	36	1	23	1	1	1	1	1	0	0	0	1	0	0	0	1	2	2	3	2	2	1	1	2	3	1	2	0	1	1	1	0	2	3
HOM03D006096	36	1	27	1	1	1	2	1	2	2	1	0	1	1	1	1	3	2	0	2	2	1	0	1	0	1	2	1	1	1	1	1	1	1
HOM03D008076	18	1	14	0	0	0	0	0	1	1	1	0	0	0	2	1	2	2	0	1	1	1	0	0	0	1	2	1	0	0	1	0	0	0