PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_18
Name: 5659BOXLELAT5659
Description: 56/59 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)56 and LAT59 promoters; Found in -103 to -94 in LAT56 and in -114 to -105 in LAT59; Involved in modulating the activity of the LAT gene promoters in pollen

#Associated genes: 107
#Associated gene families: 84

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000006	4746	4	31	109	98	110	148	109	92	93	87	13	108	236	311	151	290	205	84	422	150	249	4	173	110	186	252	121	134	183	139	89	152	138
HOM03D000007	4579	1	29	124	134	36	177	83	55	74	55	0	148	181	480	134	258	137	43	457	140	281	0	161	2	188	346	97	119	166	144	79	172	108
HOM03D000014	2794	1	31	70	74	102	118	93	76	68	57	1	79	73	97	66	187	99	45	170	104	135	1	148	65	71	117	75	105	127	77	71	77	146
HOM03D000015	2743	1	29	87	92	43	172	45	67	74	68	0	95	95	149	84	163	140	57	184	110	87	0	105	32	86	139	78	69	79	88	79	67	109
HOM03D000021	2196	2	29	96	88	49	111	62	57	41	57	0	86	69	54	74	134	95	26	144	79	85	0	82	38	68	123	56	69	87	59	73	51	83
HOM03D000029	1996	1	31	58	57	30	120	37	51	55	45	1	56	46	69	44	160	106	39	132	94	90	1	63	33	52	92	54	73	84	49	58	53	94
HOM03D000045	1603	9	29	37	34	46	50	28	37	37	43	0	35	44	84	50	116	73	32	113	72	71	0	60	44	47	95	47	52	57	42	32	40	85
HOM03D000057	1388	1	31	53	50	34	77	33	35	33	33	8	47	35	46	34	90	61	28	88	49	41	1	45	29	58	63	32	50	53	35	50	40	57
HOM03D000061	1331	1	31	50	45	30	66	32	33	39	31	14	47	32	44	34	103	65	24	96	49	51	3	47	27	32	56	32	40	45	35	39	33	57
HOM03D000093	1044	2	31	40	34	17	57	27	22	21	20	2	37	22	57	38	47	43	13	70	30	76	1	49	12	25	42	25	26	57	36	32	27	39
HOM03D000094	1037	1	22	2	3	0	1	0	0	0	0	0	56	3	0	25	282	3	27	47	1	322	0	8	3	11	27	3	88	68	16	37	0	4
HOM03D000096	1015	1	31	34	26	23	53	18	26	26	25	1	30	26	29	26	71	49	16	57	41	36	1	37	44	29	53	30	41	33	31	29	32	42
HOM03D000101	976	1	31	29	33	22	63	23	25	27	25	29	31	24	25	20	65	43	21	74	33	37	5	33	28	23	38	25	29	29	20	32	23	42
HOM03D000104	938	3	29	30	32	14	61	19	31	28	24	0	31	20	25	22	78	48	21	54	45	61	0	28	13	22	39	22	34	30	21	31	16	38
HOM03D000108	887	1	29	32	29	18	51	28	19	18	23	0	30	29	27	21	67	40	19	59	30	33	0	27	21	22	39	20	31	40	21	31	24	38
HOM03D000119	809	1	30	21	24	23	39	14	20	21	20	1	19	20	17	22	68	37	16	48	29	50	0	29	18	18	41	18	26	31	20	30	28	41
HOM03D000138	734	1	29	25	20	13	34	16	35	42	28	0	19	22	27	21	53	30	16	49	33	28	0	16	7	18	24	24	21	20	22	22	30	19
HOM03D000168	607	1	31	21	21	9	36	10	18	18	17	6	24	15	11	13	42	26	12	27	21	39	4	19	11	13	24	19	24	26	18	25	15	23
HOM03D000188	547	1	30	22	16	12	33	12	16	16	13	0	15	11	11	11	41	26	8	42	21	23	1	23	10	13	24	12	19	20	12	16	16	32
HOM03D000193	538	1	29	17	19	10	33	13	21	17	15	0	19	12	19	15	38	30	10	36	21	27	0	11	2	14	21	12	21	22	14	18	15	16
HOM03D000202	506	1	29	17	16	12	20	12	14	17	18	0	16	16	14	15	32	20	12	37	25	20	0	24	4	16	24	15	8	11	16	16	16	23
HOM03D000207	498	1	31	33	20	7	30	10	12	9	9	3	48	15	9	10	16	17	3	24	15	27	1	28	7	13	20	12	26	14	10	14	19	17
HOM03D000220	473	1	29	13	15	19	18	15	15	16	14	0	14	16	16	19	30	16	3	19	17	28	0	21	6	14	22	16	15	15	19	13	13	16
HOM03D000245	438	1	30	12	12	10	23	10	11	10	9	0	13	10	16	14	26	18	4	47	17	13	1	14	17	16	19	12	17	19	8	11	10	19
HOM03D000268	419	1	31	13	13	6	24	9	11	12	11	2	13	11	9	11	35	25	10	29	15	14	2	14	4	11	22	10	14	14	11	12	14	18
HOM03D000282	402	1	31	13	11	9	20	7	11	11	10	3	12	10	11	9	41	22	7	1	16	19	1	17	9	12	21	11	14	14	10	12	11	27
HOM03D000301	383	1	27	17	10	0	10	4	3	2	0	0	5	22	9	24	28	30	7	23	7	69	0	14	1	23	8	5	8	14	7	8	12	13
HOM03D000304	379	1	31	16	15	7	23	8	8	6	16	3	15	14	8	9	23	18	3	20	13	18	1	16	10	10	20	10	9	11	11	11	12	15
HOM03D000330	356	1	29	12	10	4	26	7	12	12	5	0	11	8	12	8	25	23	10	17	16	15	0	14	4	8	17	6	12	14	9	11	8	20
HOM03D000332	354	1	28	10	12	5	18	8	12	12	8	0	12	10	10	6	25	21	4	23	19	11	0	15	0	9	19	11	11	11	9	12	10	21
HOM03D000347	346	1	29	10	10	6	20	5	9	9	6	0	9	10	9	8	25	19	7	24	16	20	0	12	5	8	15	9	16	16	10	9	10	14
HOM03D000368	335	1	31	13	11	6	13	8	7	8	5	28	9	7	7	10	17	14	8	18	8	24	2	11	9	6	12	7	15	17	7	8	5	15
HOM03D000374	331	1	29	8	9	7	16	7	8	8	11	0	9	11	7	10	26	18	2	17	17	10	0	13	2	11	20	14	12	13	10	8	10	17
HOM03D000426	295	1	30	9	8	8	14	9	8	9	7	2	8	8	9	7	20	17	5	17	11	10	0	12	5	6	20	8	10	8	8	9	9	14
HOM03D000440	285	1	31	6	5	7	11	4	10	10	9	3	6	9	11	8	23	17	4	17	16	8	1	7	5	10	13	9	9	9	12	6	10	10
HOM03D000448	281	1	30	1	11	4	25	3	7	10	11	0	11	10	13	8	20	13	3	21	8	10	1	3	7	8	16	5	10	8	10	10	10	4
HOM03D000453	279	1	31	3	2	2	7	3	3	2	9	4	3	2	12	18	24	11	8	57	21	18	2	4	3	19	4	4	6	8	6	2	3	9
HOM03D000468	271	2	29	6	6	14	14	5	7	7	7	0	6	7	8	7	23	15	4	16	11	14	0	6	12	8	8	11	8	9	7	6	12	7
HOM03D000476	268	1	30	7	7	6	8	8	6	20	10	6	7	9	24	8	15	6	3	0	9	9	4	8	7	8	9	8	14	17	6	5	7	7
HOM03D000504	257	1	29	10	9	7	13	6	8	9	3	0	9	6	5	8	15	15	2	23	14	11	0	6	5	11	11	7	7	8	7	8	8	6
HOM03D000675	206	1	31	4	5	3	10	4	5	4	5	1	5	4	6	4	19	8	3	15	9	11	1	12	3	9	9	5	6	8	6	5	7	10
HOM03D000679	204	1	31	6	6	4	11	4	6	6	5	1	5	5	6	4	11	11	3	12	8	7	2	5	9	5	9	7	10	9	4	6	4	13
HOM03D000688	201	1	27	2	2	7	0	4	1	6	4	4	0	3	6	4	5	25	4	5	6	25	0	6	4	0	11	4	31	18	3	1	5	5
HOM03D000691	201	1	29	5	6	5	11	5	4	4	4	0	6	4	7	8	9	7	13	10	7	12	0	5	3	4	10	5	14	11	5	6	5	6
HOM03D000802	175	2	28	3	3	5	5	5	5	3	5	0	3	6	7	6	16	12	2	14	7	9	0	3	0	6	12	5	9	8	6	3	3	4
HOM03D000872	165	1	29	6	7	4	10	3	3	5	4	0	5	6	7	4	8	6	2	8	7	4	0	5	10	4	8	4	5	6	4	5	9	6
HOM03D000924	158	1	22	5	5	0	8	2	0	0	3	0	5	7	9	15	15	5	4	21	6	12	0	0	0	8	6	5	5	6	4	2	0	0
HOM03D001005	148	1	29	5	6	1	8	3	4	5	2	0	6	3	9	4	12	6	3	8	5	5	0	5	5	4	7	3	7	6	3	6	3	4
HOM03D001006	148	1	29	4	4	2	12	2	4	4	3	0	5	3	3	4	10	7	1	14	6	6	0	2	7	5	6	3	9	6	3	4	4	5
HOM03D001019	146	1	31	4	3	3	6	4	4	4	5	3	3	4	7	5	12	7	1	11	5	6	1	5	3	4	6	5	3	5	4	3	3	7
HOM03D001029	145	1	31	6	4	7	9	3	2	2	8	2	3	3	2	3	9	3	4	9	4	4	2	3	3	8	3	3	3	4	3	2	21	3
HOM03D001070	142	1	31	2	4	4	5	4	4	4	4	2	4	4	4	3	5	5	4	13	6	4	2	8	2	6	8	5	4	4	4	4	4	6
HOM03D001075	141	1	30	6	4	2	5	2	3	3	3	1	4	3	6	2	15	8	7	10	4	8	0	3	4	2	6	4	2	3	5	4	3	9
HOM03D001131	136	1	30	4	3	2	5	2	2	2	3	0	3	5	4	5	13	6	5	11	5	3	2	4	7	3	4	4	3	3	3	3	3	14
HOM03D001156	132	4	31	3	3	3	7	3	2	2	3	3	3	3	6	3	9	7	3	10	5	5	1	5	4	3	7	4	4	4	3	3	3	8
HOM03D001331	117	1	29	3	3	3	7	3	4	3	3	0	3	2	3	4	7	5	2	5	3	2	0	5	12	3	6	3	3	5	3	3	3	6
HOM03D001424	112	1	29	3	2	3	6	2	3	3	4	0	3	4	3	3	6	6	2	6	3	3	0	3	4	4	6	2	4	6	4	4	3	7
HOM03D001472	109	1	29	2	3	1	1	2	4	2	1	0	2	2	17	4	4	4	4	4	5	2	0	3	1	7	6	2	9	4	6	2	2	3
HOM03D001478	108	1	31	3	3	3	4	3	3	3	2	6	3	3	5	3	8	6	1	4	5	4	1	2	4	3	3	3	3	3	4	3	4	3
HOM03D001537	105	1	31	4	2	5	1	3	3	4	7	2	2	3	2	2	6	2	2	10	4	6	3	2	2	2	3	2	2	5	2	3	2	7
HOM03D001701	97	2	26	3	3	1	4	3	4	4	3	0	3	3	4	3	8	7	3	6	6	4	0	0	0	3	7	3	3	3	3	1	2	0
HOM03D001780	93	1	28	4	4	2	4	2	3	3	1	0	3	3	2	2	10	4	1	6	4	3	0	3	0	2	4	2	3	3	2	3	2	8
HOM03D002006	85	1	30	2	2	2	2	3	2	3	2	0	2	2	10	3	4	4	1	9	2	2	2	2	1	3	6	2	2	2	2	1	3	2
HOM03D002015	84	1	31	1	2	2	2	3	2	2	1	2	2	2	20	3	4	2	1	4	1	2	2	2	2	2	2	1	2	2	2	3	3	3
HOM03D002208	79	1	29	2	2	1	3	2	2	2	1	0	2	2	4	2	6	5	1	8	3	3	0	1	5	2	3	1	3	3	2	2	3	3
HOM03D002428	73	1	30	5	4	1	7	4	1	3	1	1	5	1	11	1	2	3	0	3	1	3	1	2	1	3	2	1	1	1	1	1	1	1
HOM03D002503	72	1	19	1	3	3	3	4	1	0	0	2	0	0	2	0	3	1	0	1	0	0	0	1	1	0	0	3	12	17	0	2	2	10
HOM03D002621	69	1	31	2	2	2	4	2	2	2	1	1	2	2	1	2	6	3	1	4	3	2	1	2	3	2	3	2	2	3	2	2	2	1
HOM03D002780	65	1	31	1	1	1	3	1	1	1	1	1	1	2	1	1	5	4	1	7	2	2	1	1	3	3	5	2	2	3	2	1	3	2
HOM03D002794	65	1	29	2	2	1	3	3	3	2	2	0	2	1	1	2	3	3	1	4	3	3	0	2	1	3	4	2	2	2	2	2	3	1
HOM03D002954	61	1	31	2	2	4	1	2	1	1	1	1	2	3	1	2	5	3	2	4	2	3	2	2	1	2	2	1	2	1	1	2	1	2
HOM03D002955	61	1	31	1	2	1	4	2	1	1	1	1	2	1	3	1	2	1	1	3	2	1	1	1	14	1	2	1	2	2	2	2	1	1
HOM03D004121	46	1	28	2	1	1	1	1	1	1	1	0	1	1	7	1	4	2	0	3	1	1	0	1	2	1	2	1	1	2	1	1	2	2
HOM03D004531	44	1	29	1	2	1	3	1	1	1	2	0	1	1	1	1	4	2	1	3	1	1	0	1	2	1	1	2	2	2	1	1	1	2
HOM03D004941	41	1	30	1	1	1	1	3	1	2	2	2	1	1	1	2	1	1	0	2	2	1	1	1	1	1	1	2	2	1	1	1	1	2
HOM03D005180	40	1	23	0	0	1	0	1	2	1	1	1	0	3	2	1	2	2	2	5	2	0	0	4	0	1	2	1	1	1	1	0	2	1
HOM03D005222	40	1	28	1	1	1	2	1	1	1	1	0	1	1	1	1	4	1	1	5	1	1	0	1	0	1	1	1	2	3	1	1	1	2
HOM03D005285	39	1	31	1	1	1	1	1	1	1	1	1	1	1	3	1	2	1	1	3	1	2	1	1	1	1	1	1	2	2	1	1	1	1
HOM03D005336	39	1	30	1	1	1	1	1	1	1	2	2	1	1	1	1	1	1	0	3	2	1	1	1	1	1	2	2	1	1	1	1	1	3
HOM03D005642	38	1	29	1	1	1	2	1	1	1	1	0	1	1	1	1	2	1	2	3	1	1	0	1	1	1	3	1	2	2	1	1	1	1
HOM03D005876	37	1	25	2	2	1	4	1	1	1	1	0	2	1	1	1	2	1	1	1	2	1	0	0	0	1	2	1	2	2	1	2	0	0
HOM03D006289	35	2	30	1	1	1	2	1	1	1	1	1	1	1	1	1	2	2	0	1	1	1	1	1	2	1	2	1	1	1	1	1	1	1
HOM03D006911	32	2	28	1	1	1	1	1	1	1	1	1	1	1	1	2	1	1	0	1	3	1	0	1	1	1	1	2	1	1	1	1	1	0
HOM03D007080	31	1	29	1	1	1	1	1	1	1	1	1	2	1	1	1	2	1	0	1	1	1	0	1	1	1	1	1	1	1	1	1	1	1