InterPro domains associated with a binding site
- Binding site
- Motif_99
- Name
- DREB1A;DREB1C;DREB1B
- Description
- Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression;Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit
- #Associated genes
- 12
- #Associated InterPro terms
- 11
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InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
---|---|---|---|---|---|---|---|---|---|---|---|---|
IPR001830 | Glycosyl transferase, family 20 | 3 (25.00%) | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
IPR023214 | HAD-like domain | 3 (25.00%) | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
IPR006379 | HAD-superfamily hydrolase, subfamily IIB | 3 (25.00%) | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
IPR003441 | NAC domain | 3 (25.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 |
IPR006734 | Protein of unknown function DUF597 | 3 (25.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 |
IPR003337 | Trehalose-phosphatase | 3 (25.00%) | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
IPR012340 | Nucleic acid-binding, OB-fold | 1 (8.33%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR022666 | Ribosomal Proteins L2, RNA binding domain | 1 (8.33%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR002171 | Ribosomal protein L2 | 1 (8.33%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR008195 | Ribosomal protein L34Ae | 1 (8.33%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
IPR005202 | Transcription factor GRAS | 1 (8.33%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |