PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_691
Name: HBOXCONSENSUSPVCHS
Description: H-box; Consensus sequence of H-boxes found in bean chs15 gene promoter; Essential for both light regulation and elicitor induction; Similar sequence was found in tobacco Tnt1 retrotransposon promoter (LTR); Tnt1 is induced by wounding and by abiotic stress; KAP-2 binds to the H-box and stimulates transcription from a promoter harboring the H-box; KAP-2 shares sequence similarity to the large subunit of mammalian Ku autoantigen

#Associated genes: 301
#Associated MapMan terms: 157

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	56 (18.60%)	1	1	6	15	12	9	6	6
27.3	RNA.regulation of transcription	53 (17.61%)	1	1	6	14	12	7	6	6
29	protein	19 (6.31%)	0	0	1	7	4	3	1	3
16	secondary metabolism	18 (5.98%)	2	2	3	5	1	3	0	2
30	signalling	17 (5.65%)	0	2	1	6	3	2	1	2
26	misc	13 (4.32%)	0	1	2	1	5	1	1	2
29.4	protein.postranslational modification	12 (3.99%)	0	0	1	5	2	2	0	2
13	amino acid metabolism	11 (3.65%)	1	4	1	3	0	0	1	1
16.8	secondary metabolism.flavonoids	8 (2.66%)	1	2	1	2	1	0	0	1
16.8.2	secondary metabolism.flavonoids.chalcones	8 (2.66%)	1	2	1	2	1	0	0	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	7 (2.33%)	0	0	2	1	1	1	0	2
9	mitochondrial electron transport / ATP synthesis	6 (1.99%)	0	0	0	0	0	0	4	2
13.2	amino acid metabolism.degradation	6 (1.99%)	1	3	1	0	0	0	0	1
13.2.6	amino acid metabolism.degradation.aromatic aa	6 (1.99%)	1	3	1	0	0	0	0	1
13.2.6.3	amino acid metabolism.degradation.aromatic aa.tryptophan	6 (1.99%)	1	3	1	0	0	0	0	1
17	hormone metabolism	6 (1.99%)	1	0	0	2	2	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	6 (1.99%)	1	1	1	3	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	6 (1.99%)	0	0	1	1	1	2	0	1
33	development	6 (1.99%)	2	0	2	1	1	0	0	0
33.99	development.unspecified	6 (1.99%)	2	0	2	1	1	0	0	0
34	transport	6 (1.99%)	0	1	0	2	1	0	2	0
11	lipid metabolism	5 (1.66%)	2	1	0	0	0	1	0	1
13.1	amino acid metabolism.synthesis	5 (1.66%)	0	1	0	3	0	0	1	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	5 (1.66%)	0	1	0	3	0	0	1	0
13.1.6.3	amino acid metabolism.synthesis.aromatic aa.phenylalanine	5 (1.66%)	0	1	0	3	0	0	1	0
13.1.6.3.1	amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase	5 (1.66%)	0	1	0	3	0	0	1	0
20	stress	5 (1.66%)	0	0	2	1	1	0	0	1
26.10	misc.cytochrome P450	5 (1.66%)	0	0	0	0	4	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	5 (1.66%)	0	0	1	2	1	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	5 (1.66%)	0	0	0	1	3	1	0	0
29.4.1	protein.postranslational modification.kinase	5 (1.66%)	0	0	1	2	1	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	5 (1.66%)	0	0	1	2	1	1	0	0
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	5 (1.66%)	0	0	0	0	0	0	4	1
30.2	signalling.receptor kinases	5 (1.66%)	0	0	0	2	1	1	1	0
31	cell	5 (1.66%)	0	1	1	0	1	0	0	2
1	PS	4 (1.33%)	0	0	0	0	3	0	0	1
11.9	lipid metabolism.lipid degradation	4 (1.33%)	2	1	0	0	0	1	0	0
16.4	secondary metabolism.N misc	4 (1.33%)	0	0	1	2	0	1	0	0
16.4.1	secondary metabolism.N misc.alkaloid-like	4 (1.33%)	0	0	1	2	0	1	0	0
17.2	hormone metabolism.auxin	4 (1.33%)	0	0	0	1	2	1	0	0
20.2	stress.abiotic	4 (1.33%)	0	0	2	0	1	0	0	1
10	cell wall	3 (1.00%)	1	0	0	0	1	0	0	1
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	3 (1.00%)	2	1	0	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	3 (1.00%)	1	0	0	0	0	1	0	1
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	3 (1.00%)	1	0	0	0	0	1	0	1
16.2.1.3	secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL	3 (1.00%)	1	0	0	0	0	1	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	3 (1.00%)	0	0	0	0	2	1	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (1.00%)	0	0	0	0	2	0	0	1
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	3 (1.00%)	0	0	1	2	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	3 (1.00%)	0	0	0	1	0	0	1	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (1.00%)	0	0	0	1	2	0	0	0
27.4	RNA.RNA binding	3 (1.00%)	0	0	0	1	0	2	0	0
28	DNA	3 (1.00%)	1	0	0	0	1	1	0	0
28.1	DNA.synthesis/chromatin structure	3 (1.00%)	1	0	0	0	1	1	0	0
29.3	protein.targeting	3 (1.00%)	0	0	0	0	2	1	0	0
29.3.4	protein.targeting.secretory pathway	3 (1.00%)	0	0	0	0	2	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	3 (1.00%)	0	0	0	3	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	3 (1.00%)	0	0	0	1	1	0	1	0
30.6	signalling.MAP kinases	3 (1.00%)	0	0	0	2	0	0	0	1
1.1	PS.lightreaction	2 (0.66%)	0	0	0	0	2	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.66%)	0	0	0	0	2	0	0	0
1.3	PS.calvin cycle	2 (0.66%)	0	0	0	0	1	0	0	1
10.7	cell wall.modification	2 (0.66%)	0	0	0	0	1	0	0	1
11.9.4.3	lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase	2 (0.66%)	1	1	0	0	0	0	0	0
12	N-metabolism	2 (0.66%)	1	1	0	0	0	0	0	0
12.2	N-metabolism.ammonia metabolism	2 (0.66%)	1	1	0	0	0	0	0	0
12.2.2	N-metabolism.ammonia metabolism.glutamine synthetase	2 (0.66%)	1	1	0	0	0	0	0	0
16.10	secondary metabolism.simple phenols	2 (0.66%)	0	0	0	1	0	1	0	0
20.2.3	stress.abiotic.drought/salt	2 (0.66%)	0	0	1	0	0	0	0	1
26.12	misc.peroxidases	2 (0.66%)	0	1	0	0	0	0	0	1
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.66%)	0	0	2	0	0	0	0	0
29.2	protein.synthesis	2 (0.66%)	0	0	0	0	0	0	1	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	2 (0.66%)	0	0	0	0	2	0	0	0
29.5	protein.degradation	2 (0.66%)	0	0	0	2	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (0.66%)	0	0	0	0	0	1	0	1
30.2.99	signalling.receptor kinases.misc	2 (0.66%)	0	0	0	1	0	1	0	0
30.3	signalling.calcium	2 (0.66%)	0	1	0	0	0	0	0	1
30.4	signalling.phosphinositides	2 (0.66%)	0	1	0	0	1	0	0	0
30.5	signalling.G-proteins	2 (0.66%)	0	0	0	2	0	0	0	0
31.1	cell.organisation	2 (0.66%)	0	0	1	0	1	0	0	0
31.3	cell.cycle	2 (0.66%)	0	1	0	0	0	0	0	1
34.99	transport.misc	2 (0.66%)	0	0	0	1	1	0	0	0
1.3.3	PS.calvin cycle.phosphoglycerate kinase	1 (0.33%)	0	0	0	0	0	0	0	1
1.3.4	PS.calvin cycle.GAP	1 (0.33%)	0	0	0	0	1	0	0	0
2	major CHO metabolism	1 (0.33%)	0	0	0	0	0	1	0	0
3	minor CHO metabolism	1 (0.33%)	0	1	0	0	0	0	0	0
7	OPP	1 (0.33%)	0	0	0	0	1	0	0	0
8	TCA / org transformation	1 (0.33%)	0	0	0	0	0	1	0	0
10.5	cell wall.cell wall proteins	1 (0.33%)	1	0	0	0	0	0	0	0
10.5.3	cell wall.cell wall proteins.LRR	1 (0.33%)	1	0	0	0	0	0	0	0
11.10	lipid metabolism.glycolipid synthesis	1 (0.33%)	0	0	0	0	0	0	0	1
11.10.2	lipid metabolism.glycolipid synthesis.DGDG synthase	1 (0.33%)	0	0	0	0	0	0	0	1
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.33%)	0	0	0	0	0	1	0	0
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase	1 (0.33%)	0	0	0	0	0	1	0	0
11.9.4.5	lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase	1 (0.33%)	1	0	0	0	0	0	0	0
15	metal handling	1 (0.33%)	0	0	0	0	0	0	0	1
15.2	metal handling.binding, chelation and storage	1 (0.33%)	0	0	0	0	0	0	0	1
16.1	secondary metabolism.isoprenoids	1 (0.33%)	0	0	1	0	0	0	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	1 (0.33%)	0	0	1	0	0	0	0	0
16.1.4.6	secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase	1 (0.33%)	0	0	1	0	0	0	0	0
16.8.2.2	secondary metabolism.flavonoids.chalcones.chalcone isomerase	1 (0.33%)	1	0	0	0	0	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.33%)	0	0	0	1	0	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (0.33%)	0	0	0	1	0	0	0	0
17.6.3	hormone metabolism.gibberelin.induced-regulated-responsive-activated	1 (0.33%)	1	0	0	0	0	0	0	0
2.1	major CHO metabolism.synthesis	1 (0.33%)	0	0	0	0	0	1	0	0
2.1.1	major CHO metabolism.synthesis.sucrose	1 (0.33%)	0	0	0	0	0	1	0	0
2.1.1.2	major CHO metabolism.synthesis.sucrose.SPP	1 (0.33%)	0	0	0	0	0	1	0	0
20.2.1	stress.abiotic.heat	1 (0.33%)	0	0	1	0	0	0	0	0
20.2.2	stress.abiotic.cold	1 (0.33%)	0	0	0	0	1	0	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	1 (0.33%)	0	0	0	1	0	0	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	1 (0.33%)	0	0	0	0	1	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.33%)	0	0	0	0	0	0	1	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (0.33%)	0	0	0	0	0	1	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.33%)	0	0	0	0	0	0	1	0
27.3.5	RNA.regulation of transcription.ARR	1 (0.33%)	0	0	0	0	0	0	1	0
27.3.57	RNA.regulation of transcription.JUMONJI family	1 (0.33%)	0	0	0	0	0	0	1	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.33%)	0	0	0	0	0	1	0	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	1 (0.33%)	0	0	0	0	1	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.33%)	0	0	0	1	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.33%)	0	0	0	0	0	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.33%)	0	0	0	1	0	0	0	0
27.3.71	RNA.regulation of transcription.SNF7	1 (0.33%)	0	0	0	0	0	0	0	1
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.33%)	0	0	0	0	1	0	0	0
28.1.3.1	DNA.synthesis/chromatin structure.histone.H1	1 (0.33%)	0	0	0	0	1	0	0	0
29.2.1.2.1.8	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8	1 (0.33%)	0	1	0	0	0	0	0	0
29.2.1.2.2.18	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18	1 (0.33%)	0	0	0	1	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.33%)	0	0	0	0	0	0	1	0
29.2.4	protein.synthesis.elongation	1 (0.33%)	0	0	0	0	0	0	0	1
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.33%)	0	0	0	0	0	1	0	0
29.5.9	protein.degradation.AAA type	1 (0.33%)	0	0	0	1	0	0	0	0
3.6	minor CHO metabolism.callose	1 (0.33%)	0	1	0	0	0	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.33%)	0	0	0	0	1	0	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	1 (0.33%)	0	0	0	0	0	0	1	0
7.1	OPP.oxidative PP	1 (0.33%)	0	0	0	0	1	0	0	0
7.1.3	OPP.oxidative PP.6-phosphogluconate dehydrogenase	1 (0.33%)	0	0	0	0	1	0	0	0
8.1	TCA / org transformation.TCA	1 (0.33%)	0	0	0	0	0	1	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.33%)	0	0	0	0	0	0	0	1
17.5	hormone metabolism.ethylene	1 (0.33%)	0	0	0	1	0	0	0	0
17.6	hormone metabolism.gibberelin	1 (0.33%)	1	0	0	0	0	0	0	0
20.1	stress.biotic	1 (0.33%)	0	0	0	1	0	0	0	0
25	C1-metabolism	1 (0.33%)	0	0	0	0	0	1	0	0
25.6	C1-metabolism.methylenetetrahydrofolate reductase	1 (0.33%)	0	0	0	0	0	1	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.33%)	0	0	0	0	0	1	0	0
26.28	misc.GDSL-motif lipase	1 (0.33%)	0	0	0	0	0	0	1	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.33%)	0	0	0	1	0	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.33%)	0	0	0	0	1	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.33%)	0	0	0	0	0	1	0	0
30.11	signalling.light	1 (0.33%)	0	0	1	0	0	0	0	0
30.9	signalling.lipids	1 (0.33%)	0	0	0	0	1	0	0	0
31.4	cell.vesicle transport	1 (0.33%)	0	0	0	0	0	0	0	1
34.1	transport.p- and v-ATPases	1 (0.33%)	0	1	0	0	0	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.33%)	0	0	0	0	0	0	1	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.33%)	0	0	0	0	0	0	1	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.33%)	0	0	0	1	0	0	0	0
8.1.1	TCA / org transformation.TCA.pyruvate DH	1 (0.33%)	0	0	0	0	0	1	0	0
8.1.1.1	TCA / org transformation.TCA.pyruvate DH.E1	1 (0.33%)	0	0	0	0	0	1	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.33%)	0	0	0	0	0	0	0	1