PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_685
Name: PALINDROMICCBOXGM
Description: Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence

#Associated genes: 300
#Associated InterPro terms: 177

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR001471	AP2/ERF domain	26 (8.67%)	2	4	2	3	2	3	3	2	3	2
IPR016177	DNA-binding domain	26 (8.67%)	2	4	2	3	2	3	3	2	3	2
IPR013083	Zinc finger, RING/FYVE/PHD-type	16 (5.33%)	3	2	0	1	2	2	2	2	1	1
IPR003657	DNA-binding WRKY	15 (5.00%)	1	1	2	1	2	2	4	0	0	2
IPR011989	Armadillo-like helical	14 (4.67%)	2	1	0	1	3	2	1	3	1	0
IPR012336	Thioredoxin-like fold	14 (4.67%)	2	2	1	4	2	1	0	1	1	0
IPR016024	Armadillo-type fold	13 (4.33%)	2	1	0	0	3	2	1	3	1	0
IPR002109	Glutaredoxin	13 (4.33%)	2	2	1	3	2	1	0	1	1	0
IPR011905	Glutaredoxin-like, plant II	12 (4.00%)	2	1	1	3	2	1	0	1	1	0
IPR003613	U box domain	12 (4.00%)	2	1	0	1	2	2	1	2	1	0
IPR002213	UDP-glucuronosyl/UDP-glucosyltransferase	11 (3.67%)	0	0	1	6	0	1	2	0	0	1
IPR009057	Homeodomain-like	10 (3.33%)	1	1	1	3	1	1	1	0	0	1
IPR012416	Calmodulin binding protein-like	9 (3.00%)	1	1	0	2	0	0	2	1	1	1
IPR004883	Lateral organ boundaries, LOB	9 (3.00%)	0	2	1	0	0	0	2	0	2	2
IPR005123	Oxoglutarate/iron-dependent dioxygenase	9 (3.00%)	1	0	0	4	0	1	2	0	0	1
IPR000719	Protein kinase domain	8 (2.67%)	1	1	0	1	0	2	3	0	0	0
IPR011009	Protein kinase-like domain	8 (2.67%)	1	1	0	1	0	2	3	0	0	0
IPR006873	Protein of unknown function DUF620	8 (2.67%)	1	1	1	0	2	2	1	0	0	0
IPR001005	SANT/Myb domain	8 (2.67%)	1	1	0	3	0	1	1	0	0	1
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	8 (2.67%)	1	1	0	1	0	2	3	0	0	0
IPR027443	Isopenicillin N synthase-like	7 (2.33%)	1	0	0	4	0	0	1	0	0	1
IPR017930	Myb domain	7 (2.33%)	1	1	0	2	0	1	1	0	0	1
IPR008271	Serine/threonine-protein kinase, active site	7 (2.33%)	1	0	0	1	0	2	3	0	0	0
IPR008889	VQ	7 (2.33%)	1	1	1	0	2	1	0	0	1	0
IPR010402	CCT domain	6 (2.00%)	1	2	0	0	0	1	1	0	0	1
IPR006447	Myb domain, plants	6 (2.00%)	1	1	1	1	0	0	1	0	0	1
IPR003441	NAC domain	6 (2.00%)	0	0	0	2	0	1	0	1	1	1
IPR026992	Non-haem dioxygenase N-terminal domain	6 (2.00%)	1	0	0	4	0	0	1	0	0	0
IPR017441	Protein kinase, ATP binding site	6 (2.00%)	1	0	0	0	0	2	3	0	0	0
IPR001395	Aldo/keto reductase	5 (1.67%)	0	0	0	5	0	0	0	0	0	0
IPR008183	Aldose 1-/Glucose-6-phosphate 1-epimerase	5 (1.67%)	1	1	1	1	0	0	1	0	0	0
IPR015443	Aldose 1-epimerase	5 (1.67%)	1	1	1	1	0	0	1	0	0	0
IPR011013	Galactose mutarotase-like domain	5 (1.67%)	1	1	1	1	0	0	1	0	0	0
IPR014718	Glycoside hydrolase-type carbohydrate-binding, subgroup	5 (1.67%)	1	1	1	1	0	0	1	0	0	0
IPR016040	NAD(P)-binding domain	5 (1.67%)	1	1	0	0	0	2	0	0	0	1
IPR023210	NADP-dependent oxidoreductase domain	5 (1.67%)	0	0	0	5	0	0	0	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	5 (1.67%)	0	0	0	1	2	1	0	0	0	1
IPR012093	Pirin	5 (1.67%)	1	1	0	2	0	0	0	0	0	1
IPR008778	Pirin, C-terminal domain	5 (1.67%)	1	1	0	2	0	0	0	0	0	1
IPR003829	Pirin, N-terminal domain	5 (1.67%)	1	1	0	2	0	0	0	0	0	1
IPR011051	RmlC-like cupin domain	5 (1.67%)	1	1	0	2	0	0	0	0	0	1
IPR014710	RmlC-like jelly roll fold	5 (1.67%)	1	1	0	2	0	0	0	0	0	1
IPR000008	C2 domain	4 (1.33%)	0	0	1	2	0	0	1	0	0	0
IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR015345	Cytokinin dehydrogenase 1, FAD/cytokinin binding domain	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR006094	FAD linked oxidase, N-terminal	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR016166	FAD-binding, type 2	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR016167	FAD-binding, type 2, subdomain 1	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	4 (1.33%)	0	0	0	0	0	0	1	1	1	1
IPR016164	FAD-linked oxidase-like, C-terminal	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR016156	FAD/NAD-linked reductase, dimerisation domain	4 (1.33%)	0	0	0	0	0	0	1	1	1	1
IPR001557	L-lactate/malate dehydrogenase	4 (1.33%)	1	1	0	0	0	1	0	0	0	1
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	4 (1.33%)	1	1	0	0	0	1	0	0	0	1
IPR022383	Lactate/malate dehydrogenase, C-terminal	4 (1.33%)	1	1	0	0	0	1	0	0	0	1
IPR001236	Lactate/malate dehydrogenase, N-terminal	4 (1.33%)	1	1	0	0	0	1	0	0	0	1
IPR001252	Malate dehydrogenase, active site	4 (1.33%)	1	1	0	0	0	1	0	0	0	1
IPR010097	Malate dehydrogenase, type 1	4 (1.33%)	1	1	0	0	0	1	0	0	0	1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	4 (1.33%)	0	0	1	0	1	1	0	0	0	1
IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain	4 (1.33%)	0	0	0	0	0	0	1	1	1	1
IPR001327	Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	4 (1.33%)	0	0	0	0	0	0	1	1	1	1
IPR007608	Senescence regulator S40	4 (1.33%)	0	0	1	0	2	0	1	0	0	0
IPR021410	The fantastic four family	4 (1.33%)	0	1	0	0	0	3	0	0	0	0
IPR016170	Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain	4 (1.33%)	0	0	1	1	0	0	1	0	0	1
IPR001841	Zinc finger, RING-type	4 (1.33%)	1	1	0	0	0	0	1	0	0	1
IPR020471	Aldo/keto reductase subgroup	3 (1.00%)	0	0	0	3	0	0	0	0	0	0
IPR003340	B3 DNA binding domain	3 (1.00%)	1	0	0	0	0	2	0	0	0	0
IPR004827	Basic-leucine zipper domain	3 (1.00%)	0	1	0	0	2	0	0	0	0	0
IPR007603	Choline transporter-like	3 (1.00%)	1	1	1	0	0	0	0	0	0	0
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	3 (1.00%)	0	0	0	0	0	1	2	0	0	0
IPR015300	DNA-binding pseudobarrel domain	3 (1.00%)	1	0	0	0	0	2	0	0	0	0
IPR015425	Formin, FH2 domain	3 (1.00%)	1	0	0	1	0	1	0	0	0	0
IPR027643	Formin-like family, viridiplantae	3 (1.00%)	1	0	0	1	0	1	0	0	0	0
IPR011025	G protein alpha subunit, helical insertion	3 (1.00%)	0	0	0	0	2	0	0	0	0	1
IPR001830	Glycosyl transferase, family 20	3 (1.00%)	0	0	0	0	0	0	1	1	1	0
IPR001019	Guanine nucleotide binding protein (G-protein), alpha subunit	3 (1.00%)	0	0	0	0	2	0	0	0	0	1
IPR023214	HAD-like domain	3 (1.00%)	0	0	0	0	0	0	1	1	1	0
IPR006379	HAD-superfamily hydrolase, subfamily IIB	3 (1.00%)	0	0	0	0	0	0	1	1	1	0
IPR002283	Isopenicillin N synthase	3 (1.00%)	0	0	0	2	0	0	1	0	0	0
IPR006578	MADF domain	3 (1.00%)	1	2	0	0	0	0	0	0	0	0
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	3 (1.00%)	0	0	1	1	0	1	0	0	0	0
IPR002935	O-methyltransferase, family 3	3 (1.00%)	0	0	0	0	0	1	0	0	1	1
IPR002885	Pentatricopeptide repeat	3 (1.00%)	0	0	0	0	0	2	1	0	0	0
IPR004099	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	3 (1.00%)	0	0	0	0	0	0	0	1	1	1
IPR005202	Transcription factor GRAS	3 (1.00%)	1	0	0	0	0	0	1	0	0	1
IPR003337	Trehalose-phosphatase	3 (1.00%)	0	0	0	0	0	0	1	1	1	0
IPR011659	WD40-like Beta Propeller	3 (1.00%)	1	1	0	0	1	0	0	0	0	0
IPR015943	WD40/YVTN repeat-like-containing domain	3 (1.00%)	2	1	0	0	0	0	0	0	0	0
IPR000058	Zinc finger, AN1-type	3 (1.00%)	0	3	0	0	0	0	0	0	0	0
IPR003311	AUX/IAA protein	2 (0.67%)	0	0	0	0	2	0	0	0	0	0
IPR013785	Aldolase-type TIM barrel	2 (0.67%)	1	1	0	0	0	0	0	0	0	0
IPR020683	Ankyrin repeat-containing domain	2 (0.67%)	0	0	0	0	0	1	0	0	0	1
IPR011525	Aux/IAA-ARF-dimerisation	2 (0.67%)	0	0	0	0	2	0	0	0	0	0
IPR006769	Coiled-coil domain containing protein 109, C-terminal	2 (0.67%)	0	0	0	0	0	0	1	0	0	1
IPR002220	DapA-like	2 (0.67%)	1	1	0	0	0	0	0	0	0	0
IPR020624	Dihydrodipicolinate synthetase, conserved site	2 (0.67%)	1	1	0	0	0	0	0	0	0	0
IPR017877	Myb-like domain	2 (0.67%)	0	0	0	2	0	0	0	0	0	0
IPR000772	Ricin B lectin domain	2 (0.67%)	0	0	0	0	0	2	0	0	0	0
IPR008802	Rubber elongation factor	2 (0.67%)	0	0	0	1	0	1	0	0	0	0
IPR025610	Transcription factor MYC/MYB N-terminal	2 (0.67%)	0	0	1	0	0	0	0	0	0	1
IPR002653	Zinc finger, A20-type	2 (0.67%)	0	2	0	0	0	0	0	0	0	0
IPR003689	Zinc/iron permease	2 (0.67%)	0	1	0	1	0	0	0	0	0	0
IPR003593	AAA+ ATPase domain	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR003960	ATPase, AAA-type, conserved site	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR003959	ATPase, AAA-type, core	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR015660	Achaete-scute transcription factor-related	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	1 (0.33%)	0	0	0	0	0	0	1	0	0	0
IPR002110	Ankyrin repeat	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR013069	BTB/POZ	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR011333	BTB/POZ fold	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR000210	BTB/POZ-like	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR027775	C2H2- zinc finger protein family	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR011006	CheY-like superfamily	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR005263	Dihydrodipicolinate synthase (4-hydroxy-tetrahydrodipicolinate synthase), DapA	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR020625	Dihydrodipicolinate synthetase, active site	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR000767	Disease resistance protein	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR001623	DnaJ domain	1 (0.33%)	0	0	0	0	0	0	1	0	0	0
IPR024228	Domain of unknown function DUF3420	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR025486	Domain of unknown function DUF4378	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR018247	EF-Hand 1, calcium-binding site	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR002048	EF-hand domain	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR011992	EF-hand domain pair	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR013601	FAE1/Type III polyketide synthase-like protein	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR004993	GH3 auxin-responsive promoter	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR014025	Glutaredoxin subgroup	1 (0.33%)	0	0	1	0	0	0	0	0	0	0
IPR010987	Glutathione S-transferase, C-terminal-like	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR004045	Glutathione S-transferase, N-terminal	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR011146	HIT-like domain	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR001310	Histidine triad (HIT) protein	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR019808	Histidine triad, conserved site	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR006455	Homeodomain, ZF-HD class	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR007828	Inositol oxygenase	1 (0.33%)	0	1	0	0	0	0	0	0	0	0
IPR003591	Leucine-rich repeat, typical subtype	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR001087	Lipase, GDSL	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR002083	MATH	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR014772	Mammalian uncoordinated homology 13, domain 2	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR014770	Munc13 homology 1	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR002182	NB-ARC	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR021094	NPR1/NIM1-like, C-terminal	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR003611	Nuclease associated modular domain 3	1 (0.33%)	0	1	0	0	0	0	0	0	0	0
IPR007318	Phospholipid methyltransferase	1 (0.33%)	0	0	0	0	0	0	1	0	0	0
IPR006620	Prolyl 4-hydroxylase, alpha subunit	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR025322	Protein of unknown function DUF4228, plant	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR007650	Protein of unknown function DUF581	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR008528	Protein of unknown function DUF810	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR001313	Pumilio RNA-binding repeat	1 (0.33%)	0	0	0	0	0	0	0	1	0	0
IPR005571	RNA polymerase, Rpb5, N-terminal	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR000783	RNA polymerase, subunit H/Rpb5 C-terminal	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR013831	SGNH hydrolase-type esterase domain	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR001789	Signal transduction response regulator, receiver domain	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR011042	Six-bladed beta-propeller, TolB-like	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR010580	Stress-associated endoplasmic reticulum protein	1 (0.33%)	0	0	0	0	0	0	1	0	0	0
IPR008974	TRAF-like	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR001906	Terpene synthase, N-terminal domain	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR005630	Terpene synthase, metal-binding domain	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR008949	Terpenoid synthase	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR011990	Tetratricopeptide-like helical	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR016039	Thiolase-like	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR016038	Thiolase-like, subgroup	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR025422	Transcription factor TGA like domain	1 (0.33%)	0	1	0	0	0	0	0	0	0	0
IPR004333	Transcription factor, SBP-box	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR027759	Trihelix transcription factor GT3	1 (0.33%)	0	0	0	1	0	0	0	0	0	0
IPR001680	WD40 repeat	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR019775	WD40 repeat, conserved site	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR017986	WD40-repeat-containing domain	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR000315	Zinc finger, B-box	1 (0.33%)	0	0	0	0	0	1	0	0	0	0
IPR007087	Zinc finger, C2H2	1 (0.33%)	0	0	0	0	0	0	0	0	0	1
IPR002867	Zinc finger, C6HC-type	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR011124	Zinc finger, CW-type	1 (0.33%)	1	0	0	0	0	0	0	0	0	0
IPR003851	Zinc finger, Dof-type	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	1 (0.33%)	0	0	0	0	1	0	0	0	0	0
IPR000679	Zinc finger, GATA-type	1 (0.33%)	0	0	0	0	0	0	1	0	0	0
IPR013088	Zinc finger, NHR/GATA-type	1 (0.33%)	0	0	0	0	0	0	1	0	0	0
IPR001876	Zinc finger, RanBP2-type	1 (0.33%)	1	0	0	0	0	0	0	0	0	0