Gene Ontology terms associated with a binding site

Binding site
Motif_67
Name
LS5ATPR1
Description
LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors
#Associated genes
9
#Associated GO terms
293
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding4 (44.44%)0000210100
GO:0003824catalytic activity3 (33.33%)0000020100
GO:0005515protein binding3 (33.33%)0000200100
GO:0005215transporter activity3 (33.33%)0000300000
GO:0015267channel activity2 (22.22%)0000200000
GO:0019899enzyme binding2 (22.22%)0000200000
GO:0022803passive transmembrane transporter activity2 (22.22%)0000200000
GO:0044389small conjugating protein ligase binding2 (22.22%)0000200000
GO:0005198structural molecule activity2 (22.22%)0000000110
GO:0022838substrate-specific channel activity2 (22.22%)0000200000
GO:0022891substrate-specific transmembrane transporter activity2 (22.22%)0000200000
GO:0022892substrate-specific transporter activity2 (22.22%)0000200000
GO:0022857transmembrane transporter activity2 (22.22%)0000200000
GO:0031625ubiquitin protein ligase binding2 (22.22%)0000200000
GO:0015250water channel activity2 (22.22%)0000200000
GO:0005372water transmembrane transporter activity2 (22.22%)0000200000
GO:0005524ATP binding1 (11.11%)0000010000
GO:0030554adenyl nucleotide binding1 (11.11%)0000010000
GO:0032559adenyl ribonucleotide binding1 (11.11%)0000010000
GO:0043168anion binding1 (11.11%)0000010000
GO:0097367carbohydrate derivative binding1 (11.11%)0000010000
GO:1901363heterocyclic compound binding1 (11.11%)0000010000
GO:0016787hydrolase activity1 (11.11%)0000000100
GO:0016788hydrolase activity, acting on ester bonds1 (11.11%)0000000100
GO:0052745inositol phosphate phosphatase activity1 (11.11%)0000000100
GO:0046030inositol trisphosphate phosphatase activity1 (11.11%)0000000100
GO:0052658inositol-1,4,5-trisphosphate 5-phosphatase activity1 (11.11%)0000000100
GO:0043167ion binding1 (11.11%)0000010000
GO:0016301kinase activity1 (11.11%)0000010000
GO:0001882nucleoside binding1 (11.11%)0000010000
GO:1901265nucleoside phosphate binding1 (11.11%)0000010000
GO:0000166nucleotide binding1 (11.11%)0000010000
GO:0097159organic cyclic compound binding1 (11.11%)0000010000
GO:0016491oxidoreductase activity1 (11.11%)0000010000
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors1 (11.11%)0000010000
GO:0016628oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1 (11.11%)0000010000
GO:0016791phosphatase activity1 (11.11%)0000000100
GO:0034593phosphatidylinositol bisphosphate phosphatase activity1 (11.11%)0000000100
GO:0034595phosphatidylinositol phosphate 5-phosphatase activity1 (11.11%)0000000100
GO:0052866phosphatidylinositol phosphate phosphatase activity1 (11.11%)0000000100
GO:0034594phosphatidylinositol trisphosphate phosphatase activity1 (11.11%)0000000100
GO:0034485phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity1 (11.11%)0000000100
GO:0004439phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1 (11.11%)0000000100
GO:0042578phosphoric ester hydrolase activity1 (11.11%)0000000100
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (11.11%)0000010000
GO:0004672protein kinase activity1 (11.11%)0000010000
GO:0004674protein serine/threonine kinase activity1 (11.11%)0000010000
GO:0016630protochlorophyllide reductase activity1 (11.11%)0000010000
GO:0001883purine nucleoside binding1 (11.11%)0000010000
GO:0017076purine nucleotide binding1 (11.11%)0000010000
GO:0032550purine ribonucleoside binding1 (11.11%)0000010000
GO:0035639purine ribonucleoside triphosphate binding1 (11.11%)0000010000
GO:0032555purine ribonucleotide binding1 (11.11%)0000010000
GO:0032549ribonucleoside binding1 (11.11%)0000010000
GO:0032553ribonucleotide binding1 (11.11%)0000010000
GO:0036094small molecule binding1 (11.11%)0000010000
GO:0003735structural constituent of ribosome1 (11.11%)0000000010
GO:0016740transferase activity1 (11.11%)0000010000
GO:0016772transferase activity, transferring phosphorus-containing groups1 (11.11%)0000010000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process8 (88.89%)0000240110
GO:0044237cellular metabolic process4 (44.44%)0000020110
GO:0008152metabolic process4 (44.44%)0000020110
GO:0071704organic substance metabolic process4 (44.44%)0000020110
GO:0042221response to chemical4 (44.44%)0000210100
GO:0009719response to endogenous stimulus4 (44.44%)0000210100
GO:0009725response to hormone4 (44.44%)0000210100
GO:0010033response to organic substance4 (44.44%)0000210100
GO:0050896response to stimulus4 (44.44%)0000210100
GO:0044763single-organism cellular process4 (44.44%)0000210100
GO:0044699single-organism process4 (44.44%)0000210100
GO:0048856anatomical structure development3 (33.33%)0000200100
GO:0032502developmental process3 (33.33%)0000200100
GO:0051234establishment of localization3 (33.33%)0000300000
GO:0051179localization3 (33.33%)0000300000
GO:0007275multicellular organismal development3 (33.33%)0000200100
GO:0032501multicellular organismal process3 (33.33%)0000200100
GO:0048513organ development3 (33.33%)0000200100
GO:0044238primary metabolic process3 (33.33%)0000010110
GO:0009628response to abiotic stimulus3 (33.33%)0000200100
GO:0009737response to abscisic acid3 (33.33%)0000200100
GO:0097305response to alcohol3 (33.33%)0000200100
GO:0033993response to lipid3 (33.33%)0000200100
GO:1901700response to oxygen-containing compound3 (33.33%)0000200100
GO:0006950response to stress3 (33.33%)0000200100
GO:0048364root development3 (33.33%)0000200100
GO:0022622root system development3 (33.33%)0000200100
GO:0044707single-multicellular organism process3 (33.33%)0000200100
GO:0044767single-organism developmental process3 (33.33%)0000200100
GO:0048731system development3 (33.33%)0000200100
GO:0009888tissue development3 (33.33%)0000200100
GO:0006810transport3 (33.33%)0000300000
GO:0009653anatomical structure morphogenesis2 (22.22%)0000200000
GO:0009058biosynthetic process2 (22.22%)0000010010
GO:0048468cell development2 (22.22%)0000200000
GO:0030154cell differentiation2 (22.22%)0000200000
GO:0016049cell growth2 (22.22%)0000200000
GO:0048469cell maturation2 (22.22%)0000200000
GO:0042546cell wall biogenesis2 (22.22%)0000020000
GO:0071554cell wall organization or biogenesis2 (22.22%)0000020000
GO:0044249cellular biosynthetic process2 (22.22%)0000010010
GO:0044085cellular component biogenesis2 (22.22%)0000020000
GO:0071840cellular component organization or biogenesis2 (22.22%)0000020000
GO:0048869cellular developmental process2 (22.22%)0000200000
GO:0044260cellular macromolecule metabolic process2 (22.22%)0000010010
GO:0044267cellular protein metabolic process2 (22.22%)0000010010
GO:0048588developmental cell growth2 (22.22%)0000200000
GO:0048589developmental growth2 (22.22%)0000200000
GO:0060560developmental growth involved in morphogenesis2 (22.22%)0000200000
GO:0021700developmental maturation2 (22.22%)0000200000
GO:0009913epidermal cell differentiation2 (22.22%)0000200000
GO:0008544epidermis development2 (22.22%)0000200000
GO:0030855epithelial cell differentiation2 (22.22%)0000200000
GO:0060429epithelium development2 (22.22%)0000200000
GO:0042044fluid transport2 (22.22%)0000200000
GO:0040007growth2 (22.22%)0000200000
GO:0080170hydrogen peroxide transmembrane transport2 (22.22%)0000200000
GO:0043170macromolecule metabolic process2 (22.22%)0000010010
GO:0051704multi-organism process2 (22.22%)0000200000
GO:1901576organic substance biosynthetic process2 (22.22%)0000010010
GO:0006796phosphate-containing compound metabolic process2 (22.22%)0000010100
GO:0006793phosphorus metabolic process2 (22.22%)0000010100
GO:0009832plant-type cell wall biogenesis2 (22.22%)0000020000
GO:0071669plant-type cell wall organization or biogenesis2 (22.22%)0000020000
GO:0019538protein metabolic process2 (22.22%)0000010010
GO:0009607response to biotic stimulus2 (22.22%)0000200000
GO:0009269response to desiccation2 (22.22%)0000200000
GO:0010035response to inorganic substance2 (22.22%)0000200000
GO:0009624response to nematode2 (22.22%)0000200000
GO:0006970response to osmotic stress2 (22.22%)0000200000
GO:0051707response to other organism2 (22.22%)0000200000
GO:0009415response to water2 (22.22%)0000200000
GO:0009414response to water deprivation2 (22.22%)0000200000
GO:0010053root epidermal cell differentiation2 (22.22%)0000200000
GO:0080147root hair cell development2 (22.22%)0000200000
GO:0048765root hair cell differentiation2 (22.22%)0000200000
GO:0048767root hair elongation2 (22.22%)0000200000
GO:0010015root morphogenesis2 (22.22%)0000200000
GO:0009834secondary cell wall biogenesis2 (22.22%)0000020000
GO:0044710single-organism metabolic process2 (22.22%)0000010100
GO:0044765single-organism transport2 (22.22%)0000200000
GO:0043588skin development2 (22.22%)0000200000
GO:0055085transmembrane transport2 (22.22%)0000200000
GO:0010054trichoblast differentiation2 (22.22%)0000200000
GO:0048764trichoblast maturation2 (22.22%)0000200000
GO:0006833water transport2 (22.22%)0000200000
GO:0046164alcohol catabolic process1 (11.11%)0000000100
GO:0006066alcohol metabolic process1 (11.11%)0000000100
GO:0019438aromatic compound biosynthetic process1 (11.11%)0000010000
GO:0010252auxin homeostasis1 (11.11%)0000000100
GO:0065007biological regulation1 (11.11%)0000000100
GO:0009756carbohydrate mediated signaling1 (11.11%)0000000100
GO:0005975carbohydrate metabolic process1 (11.11%)0000000100
GO:0009056catabolic process1 (11.11%)0000000100
GO:0007154cell communication1 (11.11%)0000000100
GO:0006725cellular aromatic compound metabolic process1 (11.11%)0000010000
GO:0044262cellular carbohydrate metabolic process1 (11.11%)0000000100
GO:0044255cellular lipid metabolic process1 (11.11%)0000000100
GO:0034645cellular macromolecule biosynthetic process1 (11.11%)0000000010
GO:0044271cellular nitrogen compound biosynthetic process1 (11.11%)0000010000
GO:0034641cellular nitrogen compound metabolic process1 (11.11%)0000010000
GO:0006464cellular protein modification process1 (11.11%)0000010000
GO:0071322cellular response to carbohydrate stimulus1 (11.11%)0000000100
GO:0070887cellular response to chemical stimulus1 (11.11%)0000000100
GO:0071310cellular response to organic substance1 (11.11%)0000000100
GO:1901701cellular response to oxygen-containing compound1 (11.11%)0000000100
GO:0051716cellular response to stimulus1 (11.11%)0000000100
GO:0048878chemical homeostasis1 (11.11%)0000000100
GO:0015995chlorophyll biosynthetic process1 (11.11%)0000010000
GO:0015994chlorophyll metabolic process1 (11.11%)0000010000
GO:0051188cofactor biosynthetic process1 (11.11%)0000010000
GO:0051186cofactor metabolic process1 (11.11%)0000010000
GO:0016311dephosphorylation1 (11.11%)0000000100
GO:0010467gene expression1 (11.11%)0000000010
GO:0046486glycerolipid metabolic process1 (11.11%)0000000100
GO:0006650glycerophospholipid metabolic process1 (11.11%)0000000100
GO:0018130heterocycle biosynthetic process1 (11.11%)0000010000
GO:0046483heterocycle metabolic process1 (11.11%)0000010000
GO:0042592homeostatic process1 (11.11%)0000000100
GO:0071545inositol phosphate catabolic process1 (11.11%)0000000100
GO:0046855inositol phosphate dephosphorylation1 (11.11%)0000000100
GO:0043647inositol phosphate metabolic process1 (11.11%)0000000100
GO:0006629lipid metabolic process1 (11.11%)0000000100
GO:0030258lipid modification1 (11.11%)0000000100
GO:0009059macromolecule biosynthetic process1 (11.11%)0000000010
GO:0043412macromolecule modification1 (11.11%)0000010000
GO:0006807nitrogen compound metabolic process1 (11.11%)0000010000
GO:1901362organic cyclic compound biosynthetic process1 (11.11%)0000010000
GO:1901360organic cyclic compound metabolic process1 (11.11%)0000010000
GO:1901616organic hydroxy compound catabolic process1 (11.11%)0000000100
GO:1901615organic hydroxy compound metabolic process1 (11.11%)0000000100
GO:1901575organic substance catabolic process1 (11.11%)0000000100
GO:1901566organonitrogen compound biosynthetic process1 (11.11%)0000010000
GO:1901564organonitrogen compound metabolic process1 (11.11%)0000010000
GO:0046434organophosphate catabolic process1 (11.11%)0000000100
GO:0019637organophosphate metabolic process1 (11.11%)0000000100
GO:0055114oxidation-reduction process1 (11.11%)0000010000
GO:0010087phloem or xylem histogenesis1 (11.11%)0000000100
GO:0046856phosphatidylinositol dephosphorylation1 (11.11%)0000000100
GO:0046488phosphatidylinositol metabolic process1 (11.11%)0000000100
GO:0046839phospholipid dephosphorylation1 (11.11%)0000000100
GO:0006644phospholipid metabolic process1 (11.11%)0000000100
GO:0046838phosphorylated carbohydrate dephosphorylation1 (11.11%)0000000100
GO:0016310phosphorylation1 (11.11%)0000010000
GO:0046148pigment biosynthetic process1 (11.11%)0000010000
GO:0042440pigment metabolic process1 (11.11%)0000010000
GO:0046174polyol catabolic process1 (11.11%)0000000100
GO:0019751polyol metabolic process1 (11.11%)0000000100
GO:0006779porphyrin-containing compound biosynthetic process1 (11.11%)0000010000
GO:0006778porphyrin-containing compound metabolic process1 (11.11%)0000010000
GO:0036211protein modification process1 (11.11%)0000010000
GO:0006468protein phosphorylation1 (11.11%)0000010000
GO:0050789regulation of biological process1 (11.11%)0000000100
GO:0065008regulation of biological quality1 (11.11%)0000000100
GO:0050794regulation of cellular process1 (11.11%)0000000100
GO:0009637response to blue light1 (11.11%)0000000100
GO:0009743response to carbohydrate1 (11.11%)0000000100
GO:0009723response to ethylene1 (11.11%)0000010000
GO:0009605response to external stimulus1 (11.11%)0000000100
GO:0009991response to extracellular stimulus1 (11.11%)0000000100
GO:0009416response to light stimulus1 (11.11%)0000000100
GO:0007584response to nutrient1 (11.11%)0000000100
GO:0031667response to nutrient levels1 (11.11%)0000000100
GO:0009314response to radiation1 (11.11%)0000000100
GO:0009611response to wounding1 (11.11%)0000000100
GO:0007165signal transduction1 (11.11%)0000000100
GO:0023052signaling1 (11.11%)0000000100
GO:0044700single organism signaling1 (11.11%)0000000100
GO:0044711single-organism biosynthetic process1 (11.11%)0000010000
GO:0044723single-organism carbohydrate metabolic process1 (11.11%)0000000100
GO:0044712single-organism catabolic process1 (11.11%)0000000100
GO:0044282small molecule catabolic process1 (11.11%)0000000100
GO:0044281small molecule metabolic process1 (11.11%)0000000100
GO:0010182sugar mediated signaling pathway1 (11.11%)0000000100
GO:0033014tetrapyrrole biosynthetic process1 (11.11%)0000010000
GO:0033013tetrapyrrole metabolic process1 (11.11%)0000010000
GO:0006412translation1 (11.11%)0000000010

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell7 (77.78%)0000230110
GO:0044464cell part7 (77.78%)0000230110
GO:0005622intracellular7 (77.78%)0000230110
GO:0043231intracellular membrane-bounded organelle7 (77.78%)0000230110
GO:0043229intracellular organelle7 (77.78%)0000230110
GO:0044424intracellular part7 (77.78%)0000230110
GO:0043227membrane-bounded organelle7 (77.78%)0000230110
GO:0043226organelle7 (77.78%)0000230110
GO:0005737cytoplasm6 (66.67%)0000230010
GO:0044444cytoplasmic part6 (66.67%)0000230010
GO:0016020membrane4 (44.44%)0000310000
GO:0009507chloroplast3 (33.33%)0000210000
GO:0009536plastid3 (33.33%)0000210000
GO:0005794Golgi apparatus2 (22.22%)0000020000
GO:0030054cell junction2 (22.22%)0000200000
GO:0071944cell periphery2 (22.22%)0000200000
GO:0005911cell-cell junction2 (22.22%)0000200000
GO:0044446intracellular organelle part2 (22.22%)0000010010
GO:0044422organelle part2 (22.22%)0000010010
GO:0005886plasma membrane2 (22.22%)0000200000
GO:0009506plasmodesma2 (22.22%)0000200000
GO:0055044symplast2 (22.22%)0000200000
GO:0005773vacuole2 (22.22%)0000200000
GO:0009941chloroplast envelope1 (11.11%)0000010000
GO:0044434chloroplast part1 (11.11%)0000010000
GO:0009534chloroplast thylakoid1 (11.11%)0000010000
GO:0009535chloroplast thylakoid membrane1 (11.11%)0000010000
GO:0031975envelope1 (11.11%)0000010000
GO:0043232intracellular non-membrane-bounded organelle1 (11.11%)0000000010
GO:0070013intracellular organelle lumen1 (11.11%)0000000010
GO:0015934large ribosomal subunit1 (11.11%)0000000010
GO:0032991macromolecular complex1 (11.11%)0000000010
GO:0031974membrane-enclosed lumen1 (11.11%)0000000010
GO:0005762mitochondrial large ribosomal subunit1 (11.11%)0000000010
GO:0005759mitochondrial matrix1 (11.11%)0000000010
GO:0044429mitochondrial part1 (11.11%)0000000010
GO:0005761mitochondrial ribosome1 (11.11%)0000000010
GO:0005739mitochondrion1 (11.11%)0000000010
GO:0043228non-membrane-bounded organelle1 (11.11%)0000000010
GO:0005634nucleus1 (11.11%)0000000100
GO:0000315organellar large ribosomal subunit1 (11.11%)0000000010
GO:0000313organellar ribosome1 (11.11%)0000000010
GO:0031967organelle envelope1 (11.11%)0000010000
GO:0043233organelle lumen1 (11.11%)0000000010
GO:0031984organelle subcompartment1 (11.11%)0000010000
GO:0034357photosynthetic membrane1 (11.11%)0000010000
GO:0009526plastid envelope1 (11.11%)0000010000
GO:0044435plastid part1 (11.11%)0000010000
GO:0031976plastid thylakoid1 (11.11%)0000010000
GO:0055035plastid thylakoid membrane1 (11.11%)0000010000
GO:0030529ribonucleoprotein complex1 (11.11%)0000000010
GO:0044391ribosomal subunit1 (11.11%)0000000010
GO:0005840ribosome1 (11.11%)0000000010
GO:0015935small ribosomal subunit1 (11.11%)0000000010
GO:0009579thylakoid1 (11.11%)0000010000
GO:0042651thylakoid membrane1 (11.11%)0000010000
GO:0044436thylakoid part1 (11.11%)0000010000