PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_633
Name: PE2FNTRNR1A
Description: pE2F (proximal E2F elemen) at -143bp of tobacco RNR1a promoter; E2F factors involved in gene induction at the G1/S transition of the cell cycle; Important for regulating specific RNR1a (ribonucleotide reductase large subunit) gene expression in response to UV-C irradiation

#Associated genes: 81
#Associated InterPro terms: 146

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR013083	Zinc finger, RING/FYVE/PHD-type	11 (13.58%)	1	0	0	1	6	1	2	0	0	0
IPR000719	Protein kinase domain	6 (7.41%)	0	1	0	1	1	2	1	0	0	0
IPR011009	Protein kinase-like domain	6 (7.41%)	0	1	0	1	1	2	1	0	0	0
IPR008271	Serine/threonine-protein kinase, active site	6 (7.41%)	0	1	0	1	1	2	1	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	6 (7.41%)	0	0	0	1	4	0	1	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	5 (6.17%)	3	0	1	0	1	0	0	0	0	0
IPR023827	Peptidase S8, subtilisin, Asp-active site	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR023828	Peptidase S8, subtilisin, Ser-active site	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR015500	Peptidase S8, subtilisin-related	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR000209	Peptidase S8/S53 domain	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR010435	Peptidase S8A, DUF1034 C-terminal	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR003137	Protease-associated domain, PA	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR017441	Protein kinase, ATP binding site	5 (6.17%)	0	1	0	1	1	2	0	0	0	0
IPR010259	Proteinase inhibitor I9	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR009020	Proteinase inhibitor, propeptide	5 (6.17%)	1	2	0	0	1	0	1	0	0	0
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	5 (6.17%)	0	0	0	1	1	2	1	0	0	0
IPR001214	SET domain	4 (4.94%)	0	0	0	0	3	0	1	0	0	0
IPR019787	Zinc finger, PHD-finger	4 (4.94%)	0	0	0	0	3	0	1	0	0	0
IPR001965	Zinc finger, PHD-type	4 (4.94%)	0	0	0	0	3	0	1	0	0	0
IPR019786	Zinc finger, PHD-type, conserved site	4 (4.94%)	0	0	0	0	3	0	1	0	0	0
IPR025780	Histone-lysine N-methyltransferase ATX	3 (3.70%)	0	0	0	0	2	0	1	0	0	0
IPR009057	Homeodomain-like	3 (3.70%)	0	0	0	0	2	0	0	0	0	1
IPR000048	IQ motif, EF-hand binding site	3 (3.70%)	2	0	0	0	0	0	1	0	0	0
IPR001611	Leucine-rich repeat	3 (3.70%)	0	0	0	0	0	2	1	0	0	0
IPR013210	Leucine-rich repeat-containing N-terminal, type 2	3 (3.70%)	0	0	0	0	0	2	1	0	0	0
IPR017930	Myb domain	3 (3.70%)	0	0	0	0	2	0	0	0	0	1
IPR001609	Myosin head, motor domain	3 (3.70%)	2	0	1	0	0	0	0	0	0	0
IPR004009	Myosin, N-terminal, SH3-like	3 (3.70%)	2	0	1	0	0	0	0	0	0	0
IPR000313	PWWP domain	3 (3.70%)	0	0	0	0	2	0	1	0	0	0
IPR003616	Post-SET domain	3 (3.70%)	0	0	0	0	2	0	1	0	0	0
IPR001005	SANT/Myb domain	3 (3.70%)	0	0	0	0	2	0	0	0	0	1
IPR000120	Amidase	2 (2.47%)	0	0	0	0	0	0	1	0	0	1
IPR023631	Amidase signature domain	2 (2.47%)	0	0	0	0	0	0	1	0	0	1
IPR008540	BZR1, transcriptional repressor	2 (2.47%)	0	0	0	1	0	1	0	0	0	0
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	2 (2.47%)	0	0	0	0	0	2	0	0	0	0
IPR018444	Dil domain	2 (2.47%)	2	0	0	0	0	0	0	0	0	0
IPR002710	Dilute	2 (2.47%)	2	0	0	0	0	0	0	0	0	0
IPR003953	FAD binding domain	2 (2.47%)	1	1	0	0	0	0	0	0	0	0
IPR000306	FYVE zinc finger	2 (2.47%)	0	0	0	1	1	0	0	0	0	0
IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal	2 (2.47%)	1	1	0	0	0	0	0	0	0	0
IPR013781	Glycoside hydrolase, catalytic domain	2 (2.47%)	0	0	0	1	0	1	0	0	0	0
IPR001554	Glycoside hydrolase, family 14	2 (2.47%)	0	0	0	1	0	1	0	0	0	0
IPR018238	Glycoside hydrolase, family 14, conserved site	2 (2.47%)	0	0	0	1	0	1	0	0	0	0
IPR001371	Glycoside hydrolase, family 14B, plant	2 (2.47%)	0	0	0	1	0	1	0	0	0	0
IPR017853	Glycoside hydrolase, superfamily	2 (2.47%)	0	0	0	1	0	1	0	0	0	0
IPR000164	Histone H3	2 (2.47%)	0	0	0	0	2	0	0	0	0	0
IPR007125	Histone core	2 (2.47%)	0	0	0	0	2	0	0	0	0	0
IPR009072	Histone-fold	2 (2.47%)	0	0	0	0	2	0	0	0	0	0
IPR006880	INO80 complex subunit B-like conserved region	2 (2.47%)	0	0	0	1	1	0	0	0	0	0
IPR005288	L-aspartate oxidase	2 (2.47%)	1	1	0	0	0	0	0	0	0	0
IPR003918	NADH:ubiquinone oxidoreductase	2 (2.47%)	0	0	0	0	1	0	0	0	0	1
IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase	2 (2.47%)	0	0	0	0	1	0	0	0	0	1
IPR024867	Nuclear factor related to kappa-B-binding protein	2 (2.47%)	0	0	0	0	0	1	1	0	0	0
IPR011993	Pleckstrin homology-like domain	2 (2.47%)	0	1	0	0	1	0	0	0	0	0
IPR000235	Ribosomal protein S5/S7	2 (2.47%)	1	0	0	0	0	1	0	0	0	0
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	2 (2.47%)	1	0	0	0	0	1	0	0	0	0
IPR023798	Ribosomal protein S7 domain	2 (2.47%)	1	0	0	0	0	1	0	0	0	0
IPR009686	Senescence/spartin-associated	2 (2.47%)	0	0	0	0	2	0	0	0	0	0
IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	2 (2.47%)	1	1	0	0	0	0	0	0	0	0
IPR001440	Tetratricopeptide TPR1	2 (2.47%)	0	0	0	0	0	0	1	0	0	1
IPR019734	Tetratricopeptide repeat	2 (2.47%)	0	0	0	0	0	0	1	0	0	1
IPR013026	Tetratricopeptide repeat-containing domain	2 (2.47%)	0	0	0	0	0	0	1	0	0	1
IPR011990	Tetratricopeptide-like helical	2 (2.47%)	0	0	0	0	0	0	1	0	0	1
IPR017455	Zinc finger, FYVE-related	2 (2.47%)	0	0	0	1	1	0	0	0	0	0
IPR007529	Zinc finger, HIT-type	2 (2.47%)	0	0	0	1	1	0	0	0	0	0
IPR001841	Zinc finger, RING-type	2 (2.47%)	1	0	0	0	0	1	0	0	0	0
IPR011761	ATP-grasp fold	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR002110	Ankyrin repeat	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR020683	Ankyrin repeat-containing domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR001164	Arf GTPase activating protein	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR027267	Arfaptin homology (AH) domain/BAR domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR003100	Argonaute/Dicer protein, PAZ domain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR000225	Armadillo	1 (1.23%)	0	0	0	0	0	0	1	0	0	0
IPR011989	Armadillo-like helical	1 (1.23%)	0	0	0	0	0	0	1	0	0	0
IPR016024	Armadillo-type fold	1 (1.23%)	0	0	0	0	0	0	1	0	0	0
IPR009818	Ataxin-2, C-terminal	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR003676	Auxin-induced protein, ARG7	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR004148	BAR domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR013591	Brevis radix (BRX) domain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR001487	Bromodomain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR018359	Bromodomain, conserved site	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR000008	C2 domain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR014939	CDT1 Geminin-binding domain-like	1 (1.23%)	0	0	0	0	0	0	0	1	0	0
IPR002423	Chaperonin Cpn60/TCP-1	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR018501	DDT domain superfamily	1 (1.23%)	0	0	0	0	0	1	0	0	0	0
IPR018500	DDT domain, subgroup	1 (1.23%)	0	0	0	0	0	1	0	0	0	0
IPR003657	DNA-binding WRKY	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR007599	Derlin	1 (1.23%)	0	0	1	0	0	0	0	0	0	0
IPR014811	Domain of unknown function DUF1785	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR025064	Domain of unknown function DUF4005	1 (1.23%)	0	0	0	0	0	0	1	0	0	0
IPR008587	Filament-like plant protein	1 (1.23%)	0	0	0	0	0	0	0	1	0	0
IPR002495	Glycosyl transferase, family 8	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR027409	GroEL-like apical domain	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR014905	HIP116, Rad5p N-terminal	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR001650	Helicase, C-terminal	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR014001	Helicase, superfamily 1/2, ATP-binding domain	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR000560	Histidine phosphatase superfamily, clade-2	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR008656	Inositol-tetrakisphosphate 1-kinase	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR011498	Kelch repeat type 2	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR015915	Kelch-type beta propeller	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR003591	Leucine-rich repeat, typical subtype	1 (1.23%)	0	0	0	0	0	0	1	0	0	0
IPR002344	Lupus La protein	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR027925	MCM N-terminal domain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR008047	Mini-chromosome maintenance complex protein 4	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR001208	Mini-chromosome maintenance, DNA-dependent ATPase	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR018525	Mini-chromosome maintenance, conserved site	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR010227	NADH-quinone oxidoreductase, chain M/4	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR012340	Nucleic acid-binding, OB-fold	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR012677	Nucleotide-binding, alpha-beta plait	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR003323	Ovarian tumour, otubain	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR027483	Phosphatidylinositol-4-phosphate 5-kinase, C-terminal	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR027484	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR002498	Phosphatidylinositol-4-phosphate 5-kinase, core	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR016034	Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR004843	Phosphoesterase domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR000932	Photosystem antenna protein-like	1 (1.23%)	0	0	0	0	0	0	0	1	0	0
IPR001849	Pleckstrin homology domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR024774	Pleckstrin homology domain, Mcp5-type	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR006734	Protein of unknown function DUF597	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR015655	Protein phosphatase 2C	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR001932	Protein phosphatase 2C (PP2C)-like domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR000222	Protein phosphatase 2C, manganese/magnesium aspartate binding site	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR004159	Putative S-adenosyl-L-methionine-dependent methyltransferase	1 (1.23%)	0	0	0	0	0	0	0	0	1	0
IPR000504	RNA recognition motif domain	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR006630	RNA-binding protein Lupus La	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR000408	Regulator of chromosome condensation, RCC1	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR012337	Ribonuclease H-like domain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR001813	Ribosomal protein L10/L12	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR001790	Ribosomal protein L10/acidic P0	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR020606	Ribosomal protein S7, conserved site	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR004039	Rubredoxin-type fold	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR000330	SNF2-related	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR006186	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	1 (1.23%)	0	1	0	0	0	0	0	0	0	0
IPR003165	Stem cell self-renewal protein Piwi	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain	1 (1.23%)	0	0	0	0	1	0	0	0	0	0
IPR009637	Transmembrane receptor, eukaryota	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR003613	U box domain	1 (1.23%)	0	0	0	0	0	0	1	0	0	0
IPR015940	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote	1 (1.23%)	0	0	0	1	0	0	0	0	0	0
IPR000608	Ubiquitin-conjugating enzyme, E2	1 (1.23%)	0	0	0	0	0	1	0	0	0	0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	1 (1.23%)	0	0	0	0	0	1	0	0	0	0
IPR011991	Winged helix-turn-helix DNA-binding domain	1 (1.23%)	0	0	0	0	0	0	0	0	0	1
IPR018957	Zinc finger, C3HC4 RING-type	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR017907	Zinc finger, RING-type, conserved site	1 (1.23%)	1	0	0	0	0	0	0	0	0	0
IPR018866	Zinc-finger domain of monoamine-oxidase A repressor R1	1 (1.23%)	0	0	0	0	0	1	0	0	0	0