PLAZA 3.0 Dicots : Binding Sites

Gene Ontology terms associated with a binding site

Binding site: Motif_560
Name: GLUTECOREOS
Description: Core site required for binding of the trans-acting factor in the promoter region of rice glutelin (type 2 glutelin gene family)

#Associated genes: 8
#Associated GO terms: 73

Biological Process
Molecular Function
Cellular Component

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Biological Process (back to top)

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GO	Description	#Associated genes	gma	ptr	ppe	vvi
GO:0044699	single-organism process	6 (75.00%)	2	3	1	0
GO:0051234	establishment of localization	4 (50.00%)	0	3	1	0
GO:0051179	localization	4 (50.00%)	0	3	1	0
GO:0044765	single-organism transport	4 (50.00%)	0	3	1	0
GO:0006810	transport	4 (50.00%)	0	3	1	0
GO:0006812	cation transport	3 (37.50%)	0	2	1	0
GO:0006811	ion transport	3 (37.50%)	0	2	1	0
GO:0030001	metal ion transport	3 (37.50%)	0	2	1	0
GO:0050896	response to stimulus	3 (37.50%)	2	0	0	1
GO:0009738	abscisic acid-activated signaling pathway	2 (25.00%)	2	0	0	0
GO:0065007	biological regulation	2 (25.00%)	2	0	0	0
GO:0007154	cell communication	2 (25.00%)	2	0	0	0
GO:0009987	cellular process	2 (25.00%)	2	0	0	0
GO:0071215	cellular response to abscisic acid stimulus	2 (25.00%)	2	0	0	0
GO:0097306	cellular response to alcohol	2 (25.00%)	2	0	0	0
GO:0070887	cellular response to chemical stimulus	2 (25.00%)	2	0	0	0
GO:0071495	cellular response to endogenous stimulus	2 (25.00%)	2	0	0	0
GO:0032870	cellular response to hormone stimulus	2 (25.00%)	2	0	0	0
GO:0071396	cellular response to lipid	2 (25.00%)	2	0	0	0
GO:0071310	cellular response to organic substance	2 (25.00%)	2	0	0	0
GO:1901701	cellular response to oxygen-containing compound	2 (25.00%)	2	0	0	0
GO:0051716	cellular response to stimulus	2 (25.00%)	2	0	0	0
GO:0006952	defense response	2 (25.00%)	2	0	0	0
GO:0009755	hormone-mediated signaling pathway	2 (25.00%)	2	0	0	0
GO:0050789	regulation of biological process	2 (25.00%)	2	0	0	0
GO:0050794	regulation of cellular process	2 (25.00%)	2	0	0	0
GO:0009737	response to abscisic acid	2 (25.00%)	2	0	0	0
GO:0097305	response to alcohol	2 (25.00%)	2	0	0	0
GO:0009607	response to biotic stimulus	2 (25.00%)	2	0	0	0
GO:0042221	response to chemical	2 (25.00%)	2	0	0	0
GO:0009719	response to endogenous stimulus	2 (25.00%)	2	0	0	0
GO:0009725	response to hormone	2 (25.00%)	2	0	0	0
GO:0033993	response to lipid	2 (25.00%)	2	0	0	0
GO:0010033	response to organic substance	2 (25.00%)	2	0	0	0
GO:1901700	response to oxygen-containing compound	2 (25.00%)	2	0	0	0
GO:0006950	response to stress	2 (25.00%)	2	0	0	0
GO:0007165	signal transduction	2 (25.00%)	2	0	0	0
GO:0023052	signaling	2 (25.00%)	2	0	0	0
GO:0044700	single organism signaling	2 (25.00%)	2	0	0	0
GO:0044763	single-organism cellular process	2 (25.00%)	2	0	0	0
GO:0010876	lipid localization	1 (12.50%)	0	1	0	0
GO:0006869	lipid transport	1 (12.50%)	0	1	0	0
GO:0033036	macromolecule localization	1 (12.50%)	0	1	0	0
GO:0071702	organic substance transport	1 (12.50%)	0	1	0	0
GO:0009648	photoperiodism	1 (12.50%)	0	0	0	1
GO:0009628	response to abiotic stimulus	1 (12.50%)	0	0	0	1
GO:0009416	response to light stimulus	1 (12.50%)	0	0	0	1
GO:0009314	response to radiation	1 (12.50%)	0	0	0	1
GO:0048511	rhythmic process	1 (12.50%)	0	0	0	1

Molecular Function (back to top)

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GO	Description	#Associated genes	gma	ptr	ppe	vvi
GO:0005488	binding	7 (87.50%)	2	3	1	1
GO:0043169	cation binding	3 (37.50%)	0	2	1	0
GO:0042802	identical protein binding	3 (37.50%)	2	0	0	1
GO:0043167	ion binding	3 (37.50%)	0	2	1	0
GO:0046872	metal ion binding	3 (37.50%)	0	2	1	0
GO:0005515	protein binding	3 (37.50%)	2	0	0	1
GO:0046983	protein dimerization activity	3 (37.50%)	2	0	0	1
GO:0042803	protein homodimerization activity	3 (37.50%)	2	0	0	1
GO:0004872	receptor activity	2 (25.00%)	2	0	0	0
GO:0008289	lipid binding	1 (12.50%)	0	1	0	0

Cellular Component (back to top)

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GO	Description	#Associated genes	gma
GO:0005623	cell	1 (12.50%)	1
GO:0044464	cell part	1 (12.50%)	1
GO:0005737	cytoplasm	1 (12.50%)	1
GO:0016023	cytoplasmic membrane-bounded vesicle	1 (12.50%)	1
GO:0044444	cytoplasmic part	1 (12.50%)	1
GO:0031410	cytoplasmic vesicle	1 (12.50%)	1
GO:0005622	intracellular	1 (12.50%)	1
GO:0043231	intracellular membrane-bounded organelle	1 (12.50%)	1
GO:0043229	intracellular organelle	1 (12.50%)	1
GO:0044424	intracellular part	1 (12.50%)	1
GO:0043227	membrane-bounded organelle	1 (12.50%)	1
GO:0031988	membrane-bounded vesicle	1 (12.50%)	1
GO:0043226	organelle	1 (12.50%)	1
GO:0031982	vesicle	1 (12.50%)	1