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WorkbenchInterPro domains associated with a binding site
- Binding site
- Motif_56
- Name
- O2F3BE2S1
- Description
- opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box
- #Associated genes
- 14
- #Associated InterPro terms
- 27
Click table-header(s) to enable sorting
| InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IPR013785 | Aldolase-type TIM barrel | 3 (21.43%) | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| IPR017853 | Glycoside hydrolase, superfamily | 3 (21.43%) | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| IPR008811 | Glycosyl hydrolases 36 | 3 (21.43%) | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| IPR014733 | Barwin-like endoglucanase | 2 (14.29%) | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR001128 | Cytochrome P450 | 2 (14.29%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR002401 | Cytochrome P450, E-class, group I | 2 (14.29%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR017972 | Cytochrome P450, conserved site | 2 (14.29%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR002963 | Expansin | 2 (14.29%) | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR007117 | Expansin, cellulose-binding-like domain | 2 (14.29%) | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR007118 | Expansin/Lol pI | 2 (14.29%) | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR007112 | Expansin/pollen allergen, DPBB domain | 2 (14.29%) | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR015655 | Protein phosphatase 2C | 2 (14.29%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| IPR001932 | Protein phosphatase 2C (PP2C)-like domain | 2 (14.29%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| IPR000222 | Protein phosphatase 2C, manganese/magnesium aspartate binding site | 2 (14.29%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| IPR009009 | RlpA-like double-psi beta-barrel domain | 2 (14.29%) | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR004713 | Calcium/proton exchanger | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR004798 | Calcium/proton exchanger CAX | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR005135 | Endonuclease/exonuclease/phosphatase | 1 (7.14%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR000300 | Inositol polyphosphate-related phosphatase | 1 (7.14%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR012463 | Ninja | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR004837 | Sodium/calcium exchanger membrane region | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR017887 | Transcription factor TCP subgroup | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR005333 | Transcription factor, TCP | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| IPR001680 | WD40 repeat | 1 (7.14%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | 1 (7.14%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR001841 | Zinc finger, RING-type | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | 1 (7.14%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |