Gene Ontology terms associated with a binding site

Binding site
Motif_56
Name
O2F3BE2S1
Description
opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box
#Associated genes
14
#Associated GO terms
313
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell7 (50.00%)2010030001
GO:0044464cell part7 (50.00%)2010030001
GO:0005622intracellular6 (42.86%)1010030001
GO:0043231intracellular membrane-bounded organelle6 (42.86%)1010030001
GO:0043229intracellular organelle6 (42.86%)1010030001
GO:0044424intracellular part6 (42.86%)1010030001
GO:0043227membrane-bounded organelle6 (42.86%)1010030001
GO:0043226organelle6 (42.86%)1010030001
GO:0030054cell junction4 (28.57%)0010020001
GO:0005911cell-cell junction4 (28.57%)0010020001
GO:0005737cytoplasm4 (28.57%)0010030000
GO:0044444cytoplasmic part4 (28.57%)0010030000
GO:0009506plasmodesma4 (28.57%)0010020001
GO:0055044symplast4 (28.57%)0010020001
GO:0009507chloroplast3 (21.43%)0010020000
GO:0009536plastid3 (21.43%)0010020000
GO:0005576extracellular region2 (14.29%)1100000000
GO:0016020membrane2 (14.29%)1000010000
GO:0005634nucleus2 (14.29%)1000000001
GO:0071944cell periphery1 (7.14%)1000000000
GO:0005618cell wall1 (7.14%)1000000000
GO:0030312external encapsulating structure1 (7.14%)1000000000
GO:0016021integral to membrane1 (7.14%)0000010000
GO:0044446intracellular organelle part1 (7.14%)0000010000
GO:0031224intrinsic to membrane1 (7.14%)0000010000
GO:0044425membrane part1 (7.14%)0000010000
GO:0031090organelle membrane1 (7.14%)0000010000
GO:0044422organelle part1 (7.14%)0000010000
GO:0000325plant-type vacuole1 (7.14%)0000010000
GO:0009705plant-type vacuole membrane1 (7.14%)0000010000
GO:0005774vacuolar membrane1 (7.14%)0000010000
GO:0044437vacuolar part1 (7.14%)0000010000
GO:0005773vacuole1 (7.14%)0000010000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0003824catalytic activity8 (57.14%)1011040001
GO:0005488binding6 (42.86%)1001020002
GO:0043169cation binding4 (28.57%)1001010001
GO:0043167ion binding4 (28.57%)1001010001
GO:0046872metal ion binding4 (28.57%)1001010001
GO:0005515protein binding4 (28.57%)1000020001
GO:0016787hydrolase activity3 (21.43%)1000020000
GO:0016788hydrolase activity, acting on ester bonds3 (21.43%)1000020000
GO:0016791phosphatase activity3 (21.43%)1000020000
GO:0042578phosphoric ester hydrolase activity3 (21.43%)1000020000
GO:0046914transition metal ion binding3 (21.43%)0001010001
GO:0020037heme binding2 (14.29%)0001000001
GO:1901363heterocyclic compound binding2 (14.29%)0001000001
GO:0005506iron ion binding2 (14.29%)0001000001
GO:0097159organic cyclic compound binding2 (14.29%)0001000001
GO:0016491oxidoreductase activity2 (14.29%)0001000001
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2 (14.29%)0001000001
GO:0004721phosphoprotein phosphatase activity2 (14.29%)0000020000
GO:0004722protein serine/threonine phosphatase activity2 (14.29%)0000020000
GO:0046906tetrapyrrole binding2 (14.29%)0001000001
GO:0022804active transmembrane transporter activity1 (7.14%)0000010000
GO:0015297antiporter activity1 (7.14%)0000010000
GO:0015085calcium ion transmembrane transporter activity1 (7.14%)0000010000
GO:0015368calcium:cation antiporter activity1 (7.14%)0000010000
GO:0015369calcium:hydrogen antiporter activity1 (7.14%)0000010000
GO:0008324cation transmembrane transporter activity1 (7.14%)0000010000
GO:0015491cation:cation antiporter activity1 (7.14%)0000010000
GO:0072509divalent inorganic cation transmembrane transporter activity1 (7.14%)0000010000
GO:0015078hydrogen ion transmembrane transporter activity1 (7.14%)0000010000
GO:0022890inorganic cation transmembrane transporter activity1 (7.14%)0000010000
GO:0052745inositol phosphate phosphatase activity1 (7.14%)1000000000
GO:0046030inositol trisphosphate phosphatase activity1 (7.14%)1000000000
GO:0052658inositol-1,4,5-trisphosphate 5-phosphatase activity1 (7.14%)1000000000
GO:0015075ion transmembrane transporter activity1 (7.14%)0000010000
GO:0046873metal ion transmembrane transporter activity1 (7.14%)0000010000
GO:0051139metal ion:hydrogen antiporter activity1 (7.14%)0000010000
GO:0015077monovalent inorganic cation transmembrane transporter activity1 (7.14%)0000010000
GO:0001071nucleic acid binding transcription factor activity1 (7.14%)0000000001
GO:0034593phosphatidylinositol bisphosphate phosphatase activity1 (7.14%)1000000000
GO:0034595phosphatidylinositol phosphate 5-phosphatase activity1 (7.14%)1000000000
GO:0052866phosphatidylinositol phosphate phosphatase activity1 (7.14%)1000000000
GO:0034594phosphatidylinositol trisphosphate phosphatase activity1 (7.14%)1000000000
GO:0034485phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity1 (7.14%)1000000000
GO:0004439phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1 (7.14%)1000000000
GO:0015291secondary active transmembrane transporter activity1 (7.14%)0000010000
GO:0003700sequence-specific DNA binding transcription factor activity1 (7.14%)0000000001
GO:0015298solute:cation antiporter activity1 (7.14%)0000010000
GO:0015299solute:hydrogen antiporter activity1 (7.14%)0000010000
GO:0022891substrate-specific transmembrane transporter activity1 (7.14%)0000010000
GO:0022892substrate-specific transporter activity1 (7.14%)0000010000
GO:0022857transmembrane transporter activity1 (7.14%)0000010000
GO:0005215transporter activity1 (7.14%)0000010000
GO:0008270zinc ion binding1 (7.14%)0000010000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process7 (50.00%)2100030001
GO:0008152metabolic process7 (50.00%)1001030002
GO:0009628response to abiotic stimulus6 (42.86%)1010030001
GO:0050896response to stimulus6 (42.86%)1010030001
GO:0006950response to stress6 (42.86%)1010030001
GO:0044699single-organism process6 (42.86%)2001010002
GO:0044237cellular metabolic process5 (35.71%)1000030001
GO:0071704organic substance metabolic process4 (28.57%)1000020001
GO:0006793phosphorus metabolic process4 (28.57%)1000030000
GO:0044238primary metabolic process4 (28.57%)1000020001
GO:0009409response to cold4 (28.57%)0010030000
GO:0009266response to temperature stimulus4 (28.57%)0010030000
GO:0044763single-organism cellular process4 (28.57%)2000010001
GO:0044710single-organism metabolic process4 (28.57%)1001000002
GO:0048856anatomical structure development3 (21.43%)2000010000
GO:0065007biological regulation3 (21.43%)1000010001
GO:0044260cellular macromolecule metabolic process3 (21.43%)0000020001
GO:0016311dephosphorylation3 (21.43%)1000020000
GO:0032502developmental process3 (21.43%)2000010000
GO:0043170macromolecule metabolic process3 (21.43%)0000020001
GO:0006796phosphate-containing compound metabolic process3 (21.43%)1000020000
GO:0042221response to chemical3 (21.43%)1000010001
GO:0009719response to endogenous stimulus3 (21.43%)1000010001
GO:0009725response to hormone3 (21.43%)1000010001
GO:0080167response to karrikin3 (21.43%)0010020000
GO:0010033response to organic substance3 (21.43%)1000010001
GO:0006979response to oxidative stress3 (21.43%)0010020000
GO:0044767single-organism developmental process3 (21.43%)2000010000
GO:0005975carbohydrate metabolic process2 (14.29%)1000000001
GO:0007154cell communication2 (14.29%)1000000001
GO:0071555cell wall organization2 (14.29%)1100000000
GO:0071554cell wall organization or biogenesis2 (14.29%)1100000000
GO:0044262cellular carbohydrate metabolic process2 (14.29%)1000000001
GO:0016043cellular component organization2 (14.29%)1100000000
GO:0071840cellular component organization or biogenesis2 (14.29%)1100000000
GO:0044267cellular protein metabolic process2 (14.29%)0000020000
GO:0006464cellular protein modification process2 (14.29%)0000020000
GO:0070887cellular response to chemical stimulus2 (14.29%)1000000001
GO:0071310cellular response to organic substance2 (14.29%)1000000001
GO:1901701cellular response to oxygen-containing compound2 (14.29%)1000000001
GO:0051716cellular response to stimulus2 (14.29%)1000000001
GO:0048878chemical homeostasis2 (14.29%)1000010000
GO:0045229external encapsulating structure organization2 (14.29%)1100000000
GO:0042592homeostatic process2 (14.29%)1000010000
GO:0043412macromolecule modification2 (14.29%)0000020000
GO:0007275multicellular organismal development2 (14.29%)1000010000
GO:0032501multicellular organismal process2 (14.29%)1000010000
GO:0048513organ development2 (14.29%)1000010000
GO:0055114oxidation-reduction process2 (14.29%)0001000001
GO:0009664plant-type cell wall organization2 (14.29%)1100000000
GO:0071669plant-type cell wall organization or biogenesis2 (14.29%)1100000000
GO:0006470protein dephosphorylation2 (14.29%)0000020000
GO:0019538protein metabolic process2 (14.29%)0000020000
GO:0036211protein modification process2 (14.29%)0000020000
GO:0050789regulation of biological process2 (14.29%)1000000001
GO:0065008regulation of biological quality2 (14.29%)1000010000
GO:0050794regulation of cellular process2 (14.29%)1000000001
GO:0009737response to abscisic acid2 (14.29%)1000000001
GO:0097305response to alcohol2 (14.29%)1000000001
GO:0010035response to inorganic substance2 (14.29%)0000010001
GO:0033993response to lipid2 (14.29%)1000000001
GO:0006970response to osmotic stress2 (14.29%)0000010001
GO:1901700response to oxygen-containing compound2 (14.29%)1000000001
GO:0009651response to salt stress2 (14.29%)0000010001
GO:0048364root development2 (14.29%)1000010000
GO:0022622root system development2 (14.29%)1000010000
GO:0007165signal transduction2 (14.29%)1000000001
GO:0023052signaling2 (14.29%)1000000001
GO:0044700single organism signaling2 (14.29%)1000000001
GO:0044707single-multicellular organism process2 (14.29%)1000010000
GO:0044723single-organism carbohydrate metabolic process2 (14.29%)1000000001
GO:0048731system development2 (14.29%)1000010000
GO:0009738abscisic acid-activated signaling pathway1 (7.14%)0000000001
GO:0046164alcohol catabolic process1 (7.14%)1000000000
GO:0006066alcohol metabolic process1 (7.14%)1000000000
GO:0009653anatomical structure morphogenesis1 (7.14%)1000000000
GO:0055081anion homeostasis1 (7.14%)0000010000
GO:0010252auxin homeostasis1 (7.14%)1000000000
GO:0009058biosynthetic process1 (7.14%)0000000001
GO:0055074calcium ion homeostasis1 (7.14%)0000010000
GO:0006816calcium ion transport1 (7.14%)0000010000
GO:0016051carbohydrate biosynthetic process1 (7.14%)0000000001
GO:0009756carbohydrate mediated signaling1 (7.14%)1000000000
GO:0009056catabolic process1 (7.14%)1000000000
GO:0055080cation homeostasis1 (7.14%)0000010000
GO:0006812cation transport1 (7.14%)0000010000
GO:0016049cell growth1 (7.14%)1000000000
GO:0000902cell morphogenesis1 (7.14%)1000000000
GO:0042545cell wall modification1 (7.14%)1000000000
GO:0042547cell wall modification involved in multidimensional cell growth1 (7.14%)1000000000
GO:0044249cellular biosynthetic process1 (7.14%)0000000001
GO:0006874cellular calcium ion homeostasis1 (7.14%)0000010000
GO:0034637cellular carbohydrate biosynthetic process1 (7.14%)0000000001
GO:0030003cellular cation homeostasis1 (7.14%)0000010000
GO:0055082cellular chemical homeostasis1 (7.14%)0000010000
GO:0032989cellular component morphogenesis1 (7.14%)1000000000
GO:0048869cellular developmental process1 (7.14%)1000000000
GO:0072503cellular divalent inorganic cation homeostasis1 (7.14%)0000010000
GO:0006073cellular glucan metabolic process1 (7.14%)0000000001
GO:0019725cellular homeostasis1 (7.14%)0000010000
GO:0006873cellular ion homeostasis1 (7.14%)0000010000
GO:0044255cellular lipid metabolic process1 (7.14%)1000000000
GO:0034645cellular macromolecule biosynthetic process1 (7.14%)0000000001
GO:0030026cellular manganese ion homeostasis1 (7.14%)0000010000
GO:0006875cellular metal ion homeostasis1 (7.14%)0000010000
GO:0033692cellular polysaccharide biosynthetic process1 (7.14%)0000000001
GO:0044264cellular polysaccharide metabolic process1 (7.14%)0000000001
GO:0071215cellular response to abscisic acid stimulus1 (7.14%)0000000001
GO:0097306cellular response to alcohol1 (7.14%)0000000001
GO:0071322cellular response to carbohydrate stimulus1 (7.14%)1000000000
GO:0071495cellular response to endogenous stimulus1 (7.14%)0000000001
GO:0032870cellular response to hormone stimulus1 (7.14%)0000000001
GO:0071396cellular response to lipid1 (7.14%)0000000001
GO:0046916cellular transition metal ion homeostasis1 (7.14%)0000010000
GO:0006882cellular zinc ion homeostasis1 (7.14%)0000010000
GO:0009631cold acclimation1 (7.14%)0000010000
GO:0048589developmental growth1 (7.14%)1000000000
GO:0060560developmental growth involved in morphogenesis1 (7.14%)1000000000
GO:0072507divalent inorganic cation homeostasis1 (7.14%)0000010000
GO:0072511divalent inorganic cation transport1 (7.14%)0000010000
GO:0070838divalent metal ion transport1 (7.14%)0000010000
GO:0051234establishment of localization1 (7.14%)0000010000
GO:0009250glucan biosynthetic process1 (7.14%)0000000001
GO:0044042glucan metabolic process1 (7.14%)0000000001
GO:0046486glycerolipid metabolic process1 (7.14%)1000000000
GO:0006650glycerophospholipid metabolic process1 (7.14%)1000000000
GO:0040007growth1 (7.14%)1000000000
GO:0009755hormone-mediated signaling pathway1 (7.14%)0000000001
GO:0071545inositol phosphate catabolic process1 (7.14%)1000000000
GO:0046855inositol phosphate dephosphorylation1 (7.14%)1000000000
GO:0043647inositol phosphate metabolic process1 (7.14%)1000000000
GO:0050801ion homeostasis1 (7.14%)0000010000
GO:0006811ion transport1 (7.14%)0000010000
GO:0006629lipid metabolic process1 (7.14%)1000000000
GO:0030258lipid modification1 (7.14%)1000000000
GO:0010351lithium ion transport1 (7.14%)0000010000
GO:0051179localization1 (7.14%)0000010000
GO:0009059macromolecule biosynthetic process1 (7.14%)0000000001
GO:0055071manganese ion homeostasis1 (7.14%)0000010000
GO:0055065metal ion homeostasis1 (7.14%)0000010000
GO:0030001metal ion transport1 (7.14%)0000010000
GO:0015672monovalent inorganic cation transport1 (7.14%)0000010000
GO:0051704multi-organism process1 (7.14%)0000010000
GO:0009825multidimensional cell growth1 (7.14%)1000000000
GO:0009788negative regulation of abscisic acid-activated signaling pathway1 (7.14%)0000000001
GO:0048519negative regulation of biological process1 (7.14%)0000000001
GO:0010648negative regulation of cell communication1 (7.14%)0000000001
GO:0048523negative regulation of cellular process1 (7.14%)0000000001
GO:1901420negative regulation of response to alcohol1 (7.14%)0000000001
GO:0048585negative regulation of response to stimulus1 (7.14%)0000000001
GO:0009968negative regulation of signal transduction1 (7.14%)0000000001
GO:0023057negative regulation of signaling1 (7.14%)0000000001
GO:1901616organic hydroxy compound catabolic process1 (7.14%)1000000000
GO:1901615organic hydroxy compound metabolic process1 (7.14%)1000000000
GO:1901576organic substance biosynthetic process1 (7.14%)0000000001
GO:1901575organic substance catabolic process1 (7.14%)1000000000
GO:0046434organophosphate catabolic process1 (7.14%)1000000000
GO:0019637organophosphate metabolic process1 (7.14%)1000000000
GO:0010087phloem or xylem histogenesis1 (7.14%)1000000000
GO:0055062phosphate ion homeostasis1 (7.14%)0000010000
GO:0046856phosphatidylinositol dephosphorylation1 (7.14%)1000000000
GO:0046488phosphatidylinositol metabolic process1 (7.14%)1000000000
GO:0046839phospholipid dephosphorylation1 (7.14%)1000000000
GO:0006644phospholipid metabolic process1 (7.14%)1000000000
GO:0046838phosphorylated carbohydrate dephosphorylation1 (7.14%)1000000000
GO:0009828plant-type cell wall loosening1 (7.14%)1000000000
GO:0009827plant-type cell wall modification1 (7.14%)1000000000
GO:0009831plant-type cell wall modification involved in multidimensional cell growth1 (7.14%)1000000000
GO:0046174polyol catabolic process1 (7.14%)1000000000
GO:0019751polyol metabolic process1 (7.14%)1000000000
GO:0000271polysaccharide biosynthetic process1 (7.14%)0000000001
GO:0005976polysaccharide metabolic process1 (7.14%)0000000001
GO:0009787regulation of abscisic acid-activated signaling pathway1 (7.14%)0000000001
GO:0009889regulation of biosynthetic process1 (7.14%)0000000001
GO:0043255regulation of carbohydrate biosynthetic process1 (7.14%)0000000001
GO:0006109regulation of carbohydrate metabolic process1 (7.14%)0000000001
GO:0010646regulation of cell communication1 (7.14%)0000000001
GO:0031326regulation of cellular biosynthetic process1 (7.14%)0000000001
GO:0010675regulation of cellular carbohydrate metabolic process1 (7.14%)0000000001
GO:2000112regulation of cellular macromolecule biosynthetic process1 (7.14%)0000000001
GO:0031323regulation of cellular metabolic process1 (7.14%)0000000001
GO:0010962regulation of glucan biosynthetic process1 (7.14%)0000000001
GO:0010556regulation of macromolecule biosynthetic process1 (7.14%)0000000001
GO:0060255regulation of macromolecule metabolic process1 (7.14%)0000000001
GO:0019222regulation of metabolic process1 (7.14%)0000000001
GO:0032885regulation of polysaccharide biosynthetic process1 (7.14%)0000000001
GO:0032881regulation of polysaccharide metabolic process1 (7.14%)0000000001
GO:0080090regulation of primary metabolic process1 (7.14%)0000000001
GO:1901419regulation of response to alcohol1 (7.14%)0000000001
GO:0048583regulation of response to stimulus1 (7.14%)0000000001
GO:0009966regulation of signal transduction1 (7.14%)0000000001
GO:0023051regulation of signaling1 (7.14%)0000000001
GO:0010581regulation of starch biosynthetic process1 (7.14%)0000000001
GO:2000904regulation of starch metabolic process1 (7.14%)0000000001
GO:0009733response to auxin1 (7.14%)0000010000
GO:0009607response to biotic stimulus1 (7.14%)0000010000
GO:0009637response to blue light1 (7.14%)1000000000
GO:0051592response to calcium ion1 (7.14%)0000010000
GO:0009743response to carbohydrate1 (7.14%)1000000000
GO:0009605response to external stimulus1 (7.14%)1000000000
GO:0009991response to extracellular stimulus1 (7.14%)1000000000
GO:0009416response to light stimulus1 (7.14%)1000000000
GO:0010038response to metal ion1 (7.14%)0000010000
GO:0009624response to nematode1 (7.14%)0000010000
GO:0007584response to nutrient1 (7.14%)1000000000
GO:0031667response to nutrient levels1 (7.14%)1000000000
GO:0051707response to other organism1 (7.14%)0000010000
GO:0009314response to radiation1 (7.14%)1000000000
GO:0009415response to water1 (7.14%)0000000001
GO:0009414response to water deprivation1 (7.14%)0000000001
GO:0009611response to wounding1 (7.14%)1000000000
GO:0044711single-organism biosynthetic process1 (7.14%)0000000001
GO:0044712single-organism catabolic process1 (7.14%)1000000000
GO:0044765single-organism transport1 (7.14%)0000010000
GO:0044282small molecule catabolic process1 (7.14%)1000000000
GO:0044281small molecule metabolic process1 (7.14%)1000000000
GO:0006814sodium ion transport1 (7.14%)0000010000
GO:0019252starch biosynthetic process1 (7.14%)0000000001
GO:0005982starch metabolic process1 (7.14%)0000000001
GO:0010182sugar mediated signaling pathway1 (7.14%)1000000000
GO:0009888tissue development1 (7.14%)1000000000
GO:0055076transition metal ion homeostasis1 (7.14%)0000010000
GO:0055085transmembrane transport1 (7.14%)0000010000
GO:0006810transport1 (7.14%)0000010000
GO:0072506trivalent inorganic anion homeostasis1 (7.14%)0000010000
GO:0009826unidimensional cell growth1 (7.14%)1000000000
GO:0055069zinc ion homeostasis1 (7.14%)0000010000