InterPro domains associated with a binding site

Binding site
Motif_556
Name
INTRONUPPER
Description
5' exon-intron splice junctions of plant introns; Plant intron upper sequence; Consensus sequence for plant introns
#Associated genes
134
#Associated InterPro terms
207

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR000719Protein kinase domain7 (5.22%)0000110122
IPR011009Protein kinase-like domain7 (5.22%)0000110122
IPR016175Cytochrome b/b66 (4.48%)1000300101
IPR027387Cytochrome b/b6-like domain6 (4.48%)1000300101
IPR009057Homeodomain-like6 (4.48%)0000401001
IPR012677Nucleotide-binding, alpha-beta plait6 (4.48%)1100030010
IPR000504RNA recognition motif domain6 (4.48%)1100030010
IPR001005SANT/Myb domain6 (4.48%)0000401001
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain6 (4.48%)0000100122
IPR013320Concanavalin A-like lectin/glucanase, subgroup5 (3.73%)0000110111
IPR005798Cytochrome b/b6, C-terminal5 (3.73%)1000200101
IPR005797Cytochrome b/b6, N-terminal5 (3.73%)1000200101
IPR016174Di-haem cytochrome, transmembrane5 (3.73%)1000200101
IPR017441Protein kinase, ATP binding site5 (3.73%)0000110012
IPR001380Ribosomal protein L13e5 (3.73%)0000001121
IPR018256Ribosomal protein L13e, conserved site5 (3.73%)0000001121
IPR008271Serine/threonine-protein kinase, active site5 (3.73%)0000110012
IPR025875Leucine rich repeat 44 (2.99%)0000100111
IPR006447Myb domain, plants4 (2.99%)0000300001
IPR000008C2 domain3 (2.24%)0011000010
IPR001611Leucine-rich repeat3 (2.24%)0000100110
IPR003591Leucine-rich repeat, typical subtype3 (2.24%)0000100110
IPR027417P-loop containing nucleoside triphosphate hydrolase3 (2.24%)0000120000
IPR002885Pentatricopeptide repeat3 (2.24%)0001000200
IPR001106Aromatic amino acid lyase2 (1.49%)0000200000
IPR003672CobN/magnesium chelatase2 (1.49%)1100000000
IPR003175Cyclin-dependent kinase inhibitor2 (1.49%)1000100000
IPR001128Cytochrome P4502 (1.49%)1000000001
IPR025064Domain of unknown function DUF40052 (1.49%)0000110000
IPR024083Fumarase/histidase, N-terminal2 (1.49%)0000200000
IPR019378GDP-fucose protein O-fucosyltransferase2 (1.49%)0000200000
IPR023296Glycosyl hydrolase, five-bladed beta-propellor domain2 (1.49%)0000011000
IPR013999HAS subgroup2 (1.49%)0000101000
IPR014012Helicase/SANT-associated, DNA binding2 (1.49%)0000101000
IPR000048IQ motif, EF-hand binding site2 (1.49%)0000110000
IPR008948L-Aspartase-like2 (1.49%)0000200000
IPR013210Leucine-rich repeat-containing N-terminal, type 22 (1.49%)0000100001
IPR022571Magnesium chelatase, subunit H, N-terminal2 (1.49%)1100000000
IPR011771Magnesium-chelatase, subunit H2 (1.49%)1100000000
IPR017877Myb-like domain2 (1.49%)0000101000
IPR005922Phenylalanine ammonia-lyase2 (1.49%)0000200000
IPR023144Phenylalanine ammonia-lyase, shielding domain2 (1.49%)0000200000
IPR022313Phenylalanine/histidine ammonia-lyases, active site2 (1.49%)0000200000
IPR001210Ribosomal protein S17e2 (1.49%)2000000000
IPR018273Ribosomal protein S17e, conserved site2 (1.49%)2000000000
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain2 (1.49%)0000000110
IPR011990Tetratricopeptide-like helical2 (1.49%)0001010000
IPR014977WRC2 (1.49%)0000011000
IPR012946X82 (1.49%)0000011000
IPR001878Zinc finger, CCHC-type2 (1.49%)1000001000
IPR001841Zinc finger, RING-type2 (1.49%)1000010000
IPR013083Zinc finger, RING/FYVE/PHD-type2 (1.49%)1000001000
IPR0030162-oxo acid dehydrogenase, lipoyl-binding site1 (0.75%)0000000001
IPR0137473-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal1 (0.75%)0000000001
IPR025669AAA domain1 (0.75%)0000010000
IPR003593AAA+ ATPase domain1 (0.75%)0000100000
IPR011527ABC transporter type 1, transmembrane domain1 (0.75%)0000100000
IPR017871ABC transporter, conserved site1 (0.75%)0000100000
IPR001140ABC transporter, transmembrane domain1 (0.75%)0000100000
IPR003439ABC transporter-like1 (0.75%)0000100000
IPR001471AP2/ERF domain1 (0.75%)0000000010
IPR013093ATPase, AAA-21 (0.75%)0000010000
IPR019591ATPase-like, ParA/MinD1 (0.75%)0000010000
IPR003311AUX/IAA protein1 (0.75%)0000000010
IPR016024Armadillo-type fold1 (0.75%)0000000001
IPR011525Aux/IAA-ARF-dimerisation1 (0.75%)0000000010
IPR003340B3 DNA binding domain1 (0.75%)0000000010
IPR013069BTB/POZ1 (0.75%)0000000001
IPR011333BTB/POZ fold1 (0.75%)0000000001
IPR000210BTB/POZ-like1 (0.75%)0000000001
IPR004827Basic-leucine zipper domain1 (0.75%)0000010000
IPR013591Brevis radix (BRX) domain1 (0.75%)0000000001
IPR006189CHASE1 (0.75%)0000001000
IPR011006CheY-like superfamily1 (0.75%)0000001000
IPR008985Concanavalin A-like lectin/glucanases superfamily1 (0.75%)0000010000
IPR006045Cupin 11 (0.75%)1000000000
IPR002401Cytochrome P450, E-class, group I1 (0.75%)1000000000
IPR017972Cytochrome P450, conserved site1 (0.75%)1000000000
IPR004877Cytochrome b561, eukaryote1 (0.75%)0100000000
IPR006593Cytochrome b561/ferric reductase transmembrane1 (0.75%)0100000000
IPR003657DNA-binding WRKY1 (0.75%)0000000100
IPR016177DNA-binding domain1 (0.75%)0000000010
IPR015300DNA-binding pseudobarrel domain1 (0.75%)0000000010
IPR018834DNA/RNA-binding domain, Est1-type1 (0.75%)0000010000
IPR005018DOMON domain1 (0.75%)0100000000
IPR017925Dihydrofolate reductase conserved site1 (0.75%)0000000010
IPR001796Dihydrofolate reductase domain1 (0.75%)0000000010
IPR024072Dihydrofolate reductase-like domain1 (0.75%)0000000010
IPR001623DnaJ domain1 (0.75%)0000010000
IPR007021Domain of unknown function DUF6591 (0.75%)0000000100
IPR023150Double Clp-N motif1 (0.75%)0000010000
IPR018247EF-Hand 1, calcium-binding site1 (0.75%)0000001000
IPR002048EF-hand domain1 (0.75%)0000000001
IPR011992EF-hand domain pair1 (0.75%)0000000001
IPR001810F-box domain1 (0.75%)0000100000
IPR013601FAE1/Type III polyketide synthase-like protein1 (0.75%)0000000001
IPR020472G-protein beta WD-40 repeat1 (0.75%)0000000010
IPR015898G-protein gamma-like domain1 (0.75%)1000000000
IPR001929Germin1 (0.75%)1000000000
IPR019780Germin, manganese binding site1 (0.75%)1000000000
IPR014978Glutamine-Leucine-Glutamine, QLQ1 (0.75%)0000001000
IPR002930Glycine cleavage H-protein1 (0.75%)0000000001
IPR017453Glycine cleavage H-protein, subgroup1 (0.75%)0000000001
IPR020581Glycine cleavage system P protein1 (0.75%)0010000000
IPR003437Glycine cleavage system P protein, homodimeric1 (0.75%)0010000000
IPR020580Glycine cleavage system P-protein, N-terminal1 (0.75%)0010000000
IPR013781Glycoside hydrolase, catalytic domain1 (0.75%)0000010000
IPR001362Glycoside hydrolase, family 321 (0.75%)0000010000
IPR006710Glycoside hydrolase, family 431 (0.75%)0000001000
IPR001547Glycoside hydrolase, family 51 (0.75%)0000010000
IPR017853Glycoside hydrolase, superfamily1 (0.75%)0000010000
IPR013189Glycosyl hydrolase family 32, C-terminal1 (0.75%)0000010000
IPR013148Glycosyl hydrolase family 32, N-terminal1 (0.75%)0000010000
IPR002495Glycosyl transferase, family 81 (0.75%)1000000000
IPR010255Haem peroxidase1 (0.75%)0100000000
IPR002016Haem peroxidase, plant/fungal/bacterial1 (0.75%)0100000000
IPR006121Heavy metal-associated domain, HMA1 (0.75%)0000100000
IPR009071High mobility group box domain1 (0.75%)0000000001
IPR003594Histidine kinase-like ATPase, ATP-binding domain1 (0.75%)0000001000
IPR001494Importin-beta, N-terminal domain1 (0.75%)0000000001
IPR002283Isopenicillin N synthase1 (0.75%)0000000001
IPR027443Isopenicillin N synthase-like1 (0.75%)0000000001
IPR003347JmjC domain1 (0.75%)0000010000
IPR006511Lateral Root Primordium type 1, C-terminal1 (0.75%)0000001000
IPR010920Like-Sm (LSM) domain1 (0.75%)0100000000
IPR001087Lipase, GDSL1 (0.75%)0000100000
IPR025756MYB-CC type transcription factor, LHEQLE-containing domain1 (0.75%)0000100000
IPR006685Mechanosensitive ion channel MscS1 (0.75%)0100000000
IPR007145Microtubule-associated protein, MAP65/Ase1/PRC11 (0.75%)0000010000
IPR003527Mitogen-activated protein (MAP) kinase, conserved site1 (0.75%)0000000010
IPR017930Myb domain1 (0.75%)0000100000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain1 (0.75%)0000100000
IPR003333Mycolic acid cyclopropane synthase1 (0.75%)0100000000
IPR016040NAD(P)-binding domain1 (0.75%)0001000000
IPR001509NAD-dependent epimerase/dehydratase1 (0.75%)0001000000
IPR026992Non-haem dioxygenase N-terminal domain1 (0.75%)0000000001
IPR005123Oxoglutarate/iron-dependent dioxygenase1 (0.75%)0000000001
IPR026057PC-Esterase1 (0.75%)0000001000
IPR025846PMR5 N-terminal domain1 (0.75%)0000001000
IPR007369Peptidase A22B, signal peptide peptidase1 (0.75%)0000000100
IPR001563Peptidase S10, serine carboxypeptidase1 (0.75%)0000100000
IPR018202Peptidase S10, serine carboxypeptidase, active site1 (0.75%)0000100000
IPR019793Peroxidases heam-ligand binding site1 (0.75%)0100000000
IPR003359Photosystem I Ycf4, assembly1 (0.75%)0100000000
IPR000823Plant peroxidase1 (0.75%)0100000000
IPR010264Plant self-incompatibility S11 (0.75%)0000000010
IPR011993Pleckstrin homology-like domain1 (0.75%)0000000001
IPR006639Presenilin/signal peptide peptidase1 (0.75%)0000000100
IPR002219Protein kinase C-like, phorbol ester/diacylglycerol binding1 (0.75%)0000001000
IPR009836Protein of unknown function DUF13991 (0.75%)1000000000
IPR021319Protein of unknown function DUF29211 (0.75%)0000010000
IPR007573Protein of unknown function DUF5661 (0.75%)0000100000
IPR006734Protein of unknown function DUF5971 (0.75%)0100000000
IPR007818Protein of unknown function DUF7021 (0.75%)0000001000
IPR008586Protein of unknown function DUF868, plant1 (0.75%)0000100000
IPR010341Protein of unknown function DUF936, plant1 (0.75%)0100000000
IPR021148Putative polysaccharide biosynthesis protein1 (0.75%)0000001000
IPR015424Pyridoxal phosphate-dependent transferase1 (0.75%)0010000000
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 11 (0.75%)0010000000
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II1 (0.75%)0000000001
IPR000408Regulator of chromosome condensation, RCC11 (0.75%)0000000001
IPR012337Ribonuclease H-like domain1 (0.75%)0000000100
IPR002132Ribosomal protein L51 (0.75%)0000100000
IPR022803Ribosomal protein L5 domain1 (0.75%)0000100000
IPR001209Ribosomal protein S141 (0.75%)0000100000
IPR018271Ribosomal protein S14, conserved site1 (0.75%)0000100000
IPR011051RmlC-like cupin domain1 (0.75%)1000000000
IPR014710RmlC-like jelly roll fold1 (0.75%)1000000000
IPR013831SGNH hydrolase-type esterase domain1 (0.75%)0000100000
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain1 (0.75%)0000001000
IPR005467Signal transduction histidine kinase, core1 (0.75%)0000001000
IPR009082Signal transduction histidine kinase, homodimeric domain1 (0.75%)0000001000
IPR004358Signal transduction histidine kinase-related protein, C-terminal1 (0.75%)0000001000
IPR001789Signal transduction response regulator, receiver domain1 (0.75%)0000001000
IPR011053Single hybrid motif1 (0.75%)0000000001
IPR011692Stress up-regulated Nod 191 (0.75%)0010000000
IPR019458Telomerase activating protein Est11 (0.75%)0000010000
IPR016039Thiolase-like1 (0.75%)0000000001
IPR016038Thiolase-like, subgroup1 (0.75%)0000000001
IPR000398Thymidylate synthase1 (0.75%)0000000010
IPR020940Thymidylate synthase, active site1 (0.75%)0000000010
IPR023451Thymidylate synthase/dCMP hydroxymethylase domain1 (0.75%)0000000010
IPR027988Transcription factor BREVIS RADIX, N-terminal domain1 (0.75%)0000000001
IPR015648Transcription factor DP1 (0.75%)0000000001
IPR014889Transcription factor DP, C-terminal1 (0.75%)0000000001
IPR003316Transcription factor E2F/dimerisation partner (TDP)1 (0.75%)0000000001
IPR004333Transcription factor, SBP-box1 (0.75%)0000000001
IPR003902Transcription regulator, GCM-like1 (0.75%)0000010000
IPR017214Uncharacterised conserved protein UCP0374711 (0.75%)0100000000
IPR001680WD40 repeat1 (0.75%)0000000010
IPR019775WD40 repeat, conserved site1 (0.75%)0000000010
IPR017986WD40-repeat-containing domain1 (0.75%)0000000010
IPR015943WD40/YVTN repeat-like-containing domain1 (0.75%)0000000010
IPR011991Winged helix-turn-helix DNA-binding domain1 (0.75%)0000000001
IPR006514Xylan biosynthesis protein IRX15/IRX15L1 (0.75%)0000001000
IPR006780YABBY protein1 (0.75%)0000000001
IPR003656Zinc finger, BED-type predicted1 (0.75%)0000010000
IPR007087Zinc finger, C2H21 (0.75%)0001000000
IPR015880Zinc finger, C2H2-like1 (0.75%)0001000000
IPR011011Zinc finger, FYVE/PHD-type1 (0.75%)0000001000
IPR000679Zinc finger, GATA-type1 (0.75%)0000010000
IPR013088Zinc finger, NHR/GATA-type1 (0.75%)0000010000
IPR019787Zinc finger, PHD-finger1 (0.75%)0000001000
IPR001965Zinc finger, PHD-type1 (0.75%)0000001000
IPR019786Zinc finger, PHD-type, conserved site1 (0.75%)0000001000
IPR006510Zinc finger, lateral root primordium type 11 (0.75%)0000001000
IPR018872Zn-cluster domain1 (0.75%)0000000100