PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_522
Name: E2Fa
Description: The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants

#Associated genes: 414
#Associated MapMan terms: 81

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
28	DNA	112 (27.05%)	10	11	10	19	18	16	15	13
28.1	DNA.synthesis/chromatin structure	80 (19.32%)	6	10	7	15	12	12	10	8
27	RNA	44 (10.63%)	2	2	4	10	8	6	6	6
27.3	RNA.regulation of transcription	44 (10.63%)	2	2	4	10	8	6	6	6
28.2	DNA.repair	27 (6.52%)	3	1	2	4	5	4	4	4
29	protein	27 (6.52%)	2	4	1	5	6	4	0	5
31	cell	23 (5.56%)	1	0	1	6	5	3	3	4
33	development	17 (4.11%)	1	1	2	1	3	5	2	2
33.99	development.unspecified	17 (4.11%)	1	1	2	1	3	5	2	2
20	stress	12 (2.90%)	1	1	0	3	2	3	0	2
27.3.67	RNA.regulation of transcription.putative transcription regulator	11 (2.66%)	2	1	1	1	2	1	1	2
29.5	protein.degradation	11 (2.66%)	0	2	0	4	2	0	0	3
20.2	stress.abiotic	9 (2.17%)	1	1	0	2	2	2	0	1
20.2.1	stress.abiotic.heat	9 (2.17%)	1	1	0	2	2	2	0	1
31.2	cell.division	9 (2.17%)	0	0	1	4	3	1	0	0
31.3	cell.cycle	9 (2.17%)	0	0	0	1	2	2	1	3
29.4	protein.postranslational modification	8 (1.93%)	0	0	1	1	2	3	0	1
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	7 (1.69%)	0	1	1	2	0	1	1	1
28.99	DNA.unspecified	6 (1.45%)	1	1	1	0	1	0	1	1
29.5.9	protein.degradation.AAA type	6 (1.45%)	0	1	0	2	0	0	0	3
34	transport	6 (1.45%)	0	1	1	2	0	1	1	0
17	hormone metabolism	5 (1.21%)	0	0	0	0	1	2	0	2
23	nucleotide metabolism	5 (1.21%)	1	0	1	1	0	0	1	1
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	5 (1.21%)	0	0	0	2	1	1	1	0
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	5 (1.21%)	0	0	1	0	1	1	1	1
27.3.99	RNA.regulation of transcription.unclassified	5 (1.21%)	0	0	1	2	0	0	1	1
30	signalling	5 (1.21%)	1	0	0	3	0	0	1	0
30.2	signalling.receptor kinases	5 (1.21%)	1	0	0	3	0	0	1	0
23.1	nucleotide metabolism.synthesis	4 (0.97%)	1	0	1	1	0	0	0	1
23.1.2	nucleotide metabolism.synthesis.purine	4 (0.97%)	1	0	1	1	0	0	0	1
23.1.2.31	nucleotide metabolism.synthesis.purine.GMP synthetase	4 (0.97%)	1	0	1	1	0	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	4 (0.97%)	0	0	0	2	1	0	1	0
29.3	protein.targeting	4 (0.97%)	1	1	0	0	1	1	0	0
29.3.4	protein.targeting.secretory pathway	4 (0.97%)	1	1	0	0	1	1	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	4 (0.97%)	1	1	0	0	1	1	0	0
29.4.1	protein.postranslational modification.kinase	4 (0.97%)	0	0	1	1	0	1	0	1
31.1	cell.organisation	4 (0.97%)	1	0	0	1	0	0	1	1
34.16	transport.ABC transporters and multidrug resistance systems	4 (0.97%)	0	0	1	2	0	1	0	0
20.1	stress.biotic	3 (0.72%)	0	0	0	1	0	1	0	1
29.1	protein.aa activation	3 (0.72%)	0	1	0	0	1	0	0	1
29.5.5	protein.degradation.serine protease	3 (0.72%)	0	0	0	2	1	0	0	0
10	cell wall	2 (0.48%)	0	1	0	1	0	0	0	0
11	lipid metabolism	2 (0.48%)	0	0	0	0	0	2	0	0
11.9	lipid metabolism.lipid degradation	2 (0.48%)	0	0	0	0	0	2	0	0
17.2	hormone metabolism.auxin	2 (0.48%)	0	0	0	0	0	1	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (0.48%)	0	0	0	0	0	1	0	1
17.3	hormone metabolism.brassinosteroid	2 (0.48%)	0	0	0	0	1	1	0	0
17.3.3	hormone metabolism.brassinosteroid.induced-regulated-responsive-activated	2 (0.48%)	0	0	0	0	1	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.48%)	0	0	0	0	0	1	0	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (0.48%)	0	0	0	0	2	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (0.48%)	0	0	0	1	0	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.48%)	0	0	0	1	0	0	1	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	2 (0.48%)	0	0	0	2	0	0	0	0
2	major CHO metabolism	1 (0.24%)	0	0	0	0	0	1	0	0
10.6	cell wall.degradation	1 (0.24%)	0	0	0	1	0	0	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	1 (0.24%)	0	0	0	1	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.24%)	0	1	0	0	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.24%)	0	1	0	0	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.24%)	0	0	0	0	0	1	0	0
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	1 (0.24%)	0	0	0	0	0	1	0	0
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	1 (0.24%)	0	0	0	0	0	1	0	0
11.9.4.13	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase	1 (0.24%)	0	0	0	0	0	1	0	0
17.5	hormone metabolism.ethylene	1 (0.24%)	0	0	0	0	0	0	0	1
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.24%)	0	0	0	0	0	0	0	1
17.5.1.1	hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase	1 (0.24%)	0	0	0	0	0	0	0	1
2.2	major CHO metabolism.degradation	1 (0.24%)	0	0	0	0	0	1	0	0
2.2.2	major CHO metabolism.degradation.starch	1 (0.24%)	0	0	0	0	0	1	0	0
2.2.2.2	major CHO metabolism.degradation.starch.starch phosphorylase	1 (0.24%)	0	0	0	0	0	1	0	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	1 (0.24%)	0	0	0	0	0	0	1	0
26	misc	1 (0.24%)	0	0	0	1	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.24%)	0	0	0	1	0	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.24%)	0	0	0	1	0	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.24%)	0	0	0	0	1	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	1 (0.24%)	0	0	0	1	0	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.24%)	0	0	0	0	0	1	0	0
29.2	protein.synthesis	1 (0.24%)	1	0	0	0	0	0	0	0
29.2.4	protein.synthesis.elongation	1 (0.24%)	1	0	0	0	0	0	0	0
30.2.7	signalling.receptor kinases.leucine rich repeat VII	1 (0.24%)	1	0	0	0	0	0	0	0
31.4	cell.vesicle transport	1 (0.24%)	0	0	0	0	0	0	1	0
34.10	transport.nucleotides	1 (0.24%)	0	0	0	0	0	0	1	0
34.98	transport.membrane system unknown	1 (0.24%)	0	1	0	0	0	0	0	0