PLAZA 3.0 Dicots : Binding Sites

Gene Ontology terms associated with a binding site

Binding site: Motif_521
Name: RBCSBOX3PS
Description: rbcS box III; 5' upstream region (-114) of pea rbcS gene; binding with trans factor GT-1; one of GT-1 boxes

#Associated genes: 9
#Associated GO terms: 74

Biological Process
Molecular Function
Cellular Component

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Molecular Function (back to top)

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GO	Description	#Associated genes	cme	egr	gma	ptr	sly	stu
GO:0005488	binding	7 (77.78%)	1	1	1	2	1	1
GO:0005515	protein binding	6 (66.67%)	0	1	1	2	1	1
GO:0003824	catalytic activity	4 (44.44%)	1	1	0	0	1	1
GO:0005524	ATP binding	2 (22.22%)	1	1	0	0	0	0
GO:0030554	adenyl nucleotide binding	2 (22.22%)	1	1	0	0	0	0
GO:0032559	adenyl ribonucleotide binding	2 (22.22%)	1	1	0	0	0	0
GO:0043168	anion binding	2 (22.22%)	1	1	0	0	0	0
GO:0097367	carbohydrate derivative binding	2 (22.22%)	1	1	0	0	0	0
GO:0004175	endopeptidase activity	2 (22.22%)	0	0	0	0	1	1
GO:1901363	heterocyclic compound binding	2 (22.22%)	1	1	0	0	0	0
GO:0016787	hydrolase activity	2 (22.22%)	0	0	0	0	1	1
GO:0042802	identical protein binding	2 (22.22%)	0	0	0	0	1	1
GO:0043167	ion binding	2 (22.22%)	1	1	0	0	0	0
GO:0016301	kinase activity	2 (22.22%)	1	1	0	0	0	0
GO:0001882	nucleoside binding	2 (22.22%)	1	1	0	0	0	0
GO:1901265	nucleoside phosphate binding	2 (22.22%)	1	1	0	0	0	0
GO:0000166	nucleotide binding	2 (22.22%)	1	1	0	0	0	0
GO:0097159	organic cyclic compound binding	2 (22.22%)	1	1	0	0	0	0
GO:0008233	peptidase activity	2 (22.22%)	0	0	0	0	1	1
GO:0070011	peptidase activity, acting on L-amino acid peptides	2 (22.22%)	0	0	0	0	1	1
GO:0016773	phosphotransferase activity, alcohol group as acceptor	2 (22.22%)	1	1	0	0	0	0
GO:0004672	protein kinase activity	2 (22.22%)	1	1	0	0	0	0
GO:0004674	protein serine/threonine kinase activity	2 (22.22%)	1	1	0	0	0	0
GO:0001883	purine nucleoside binding	2 (22.22%)	1	1	0	0	0	0
GO:0017076	purine nucleotide binding	2 (22.22%)	1	1	0	0	0	0
GO:0032550	purine ribonucleoside binding	2 (22.22%)	1	1	0	0	0	0
GO:0035639	purine ribonucleoside triphosphate binding	2 (22.22%)	1	1	0	0	0	0
GO:0032555	purine ribonucleotide binding	2 (22.22%)	1	1	0	0	0	0
GO:0032549	ribonucleoside binding	2 (22.22%)	1	1	0	0	0	0
GO:0032553	ribonucleotide binding	2 (22.22%)	1	1	0	0	0	0
GO:0017171	serine hydrolase activity	2 (22.22%)	0	0	0	0	1	1
GO:0004252	serine-type endopeptidase activity	2 (22.22%)	0	0	0	0	1	1
GO:0008236	serine-type peptidase activity	2 (22.22%)	0	0	0	0	1	1
GO:0036094	small molecule binding	2 (22.22%)	1	1	0	0	0	0
GO:0016740	transferase activity	2 (22.22%)	1	1	0	0	0	0
GO:0016772	transferase activity, transferring phosphorus-containing groups	2 (22.22%)	1	1	0	0	0	0
GO:0005516	calmodulin binding	1 (11.11%)	0	0	0	1	0	0
GO:0004713	protein tyrosine kinase activity	1 (11.11%)	1	0	0	0	0	0

Biological Process (back to top)

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GO	Description	#Associated genes	cme	egr	ptr	sly	stu
GO:0043170	macromolecule metabolic process	4 (44.44%)	1	1	0	1	1
GO:0008152	metabolic process	4 (44.44%)	1	1	0	1	1
GO:0071704	organic substance metabolic process	4 (44.44%)	1	1	0	1	1
GO:0044238	primary metabolic process	4 (44.44%)	1	1	0	1	1
GO:0019538	protein metabolic process	4 (44.44%)	1	1	0	1	1
GO:0065007	biological regulation	2 (22.22%)	0	0	0	1	1
GO:0044260	cellular macromolecule metabolic process	2 (22.22%)	1	1	0	0	0
GO:0044237	cellular metabolic process	2 (22.22%)	1	1	0	0	0
GO:0009987	cellular process	2 (22.22%)	1	1	0	0	0
GO:0044267	cellular protein metabolic process	2 (22.22%)	1	1	0	0	0
GO:0006464	cellular protein modification process	2 (22.22%)	1	1	0	0	0
GO:0043412	macromolecule modification	2 (22.22%)	1	1	0	0	0
GO:0043086	negative regulation of catalytic activity	2 (22.22%)	0	0	0	1	1
GO:0044092	negative regulation of molecular function	2 (22.22%)	0	0	0	1	1
GO:0006796	phosphate-containing compound metabolic process	2 (22.22%)	1	1	0	0	0
GO:0006793	phosphorus metabolic process	2 (22.22%)	1	1	0	0	0
GO:0016310	phosphorylation	2 (22.22%)	1	1	0	0	0
GO:0036211	protein modification process	2 (22.22%)	1	1	0	0	0
GO:0006468	protein phosphorylation	2 (22.22%)	1	1	0	0	0
GO:0006508	proteolysis	2 (22.22%)	0	0	0	1	1
GO:0050789	regulation of biological process	2 (22.22%)	0	0	0	1	1
GO:0050790	regulation of catalytic activity	2 (22.22%)	0	0	0	1	1
GO:0019222	regulation of metabolic process	2 (22.22%)	0	0	0	1	1
GO:0065009	regulation of molecular function	2 (22.22%)	0	0	0	1	1
GO:0009733	response to auxin	1 (11.11%)	0	0	1	0	0
GO:0042221	response to chemical	1 (11.11%)	0	0	1	0	0
GO:0009719	response to endogenous stimulus	1 (11.11%)	0	0	1	0	0
GO:0009725	response to hormone	1 (11.11%)	0	0	1	0	0
GO:0010033	response to organic substance	1 (11.11%)	0	0	1	0	0
GO:0050896	response to stimulus	1 (11.11%)	0	0	1	0	0

Cellular Component (back to top)

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GO	Description	#Associated genes	sly	stu
GO:0005623	cell	2 (22.22%)	1	1
GO:0044464	cell part	2 (22.22%)	1	1
GO:0071944	cell periphery	2 (22.22%)	1	1
GO:0005618	cell wall	2 (22.22%)	1	1
GO:0030312	external encapsulating structure	2 (22.22%)	1	1
GO:0016020	membrane	2 (22.22%)	1	1