PLAZA 3.0 Dicots : Binding Sites

Gene Ontology terms associated with a binding site

Binding site: Motif_506
Name: IDRSZMFER1
Description: IDRS (Iron-Dependent Regulatory Sequence) found in maize and Arabidopsis ferritin genes (Fer1); IDRS is responsible for transcriptional repression of ZmFer1 gene under low iron supply conditions; IDRS is not involved in the Fe-regulated expression of the AtAPX1 gene

#Associated genes: 4
#Associated GO terms: 108

Biological Process
Molecular Function
Cellular Component

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Biological Process (back to top)

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GO	Description	#Associated genes	ath	bra	ptr
GO:0048856	anatomical structure development	4 (100.00%)	1	1	2
GO:0065007	biological regulation	4 (100.00%)	1	1	2
GO:0055080	cation homeostasis	4 (100.00%)	1	1	2
GO:0006812	cation transport	4 (100.00%)	1	1	2
GO:0030003	cellular cation homeostasis	4 (100.00%)	1	1	2
GO:0055082	cellular chemical homeostasis	4 (100.00%)	1	1	2
GO:0019725	cellular homeostasis	4 (100.00%)	1	1	2
GO:0006873	cellular ion homeostasis	4 (100.00%)	1	1	2
GO:0006879	cellular iron ion homeostasis	4 (100.00%)	1	1	2
GO:0044237	cellular metabolic process	4 (100.00%)	1	1	2
GO:0006875	cellular metal ion homeostasis	4 (100.00%)	1	1	2
GO:0009987	cellular process	4 (100.00%)	1	1	2
GO:0046916	cellular transition metal ion homeostasis	4 (100.00%)	1	1	2
GO:0048878	chemical homeostasis	4 (100.00%)	1	1	2
GO:0032502	developmental process	4 (100.00%)	1	1	2
GO:0003006	developmental process involved in reproduction	4 (100.00%)	1	1	2
GO:0051234	establishment of localization	4 (100.00%)	1	1	2
GO:0009908	flower development	4 (100.00%)	1	1	2
GO:0042592	homeostatic process	4 (100.00%)	1	1	2
GO:0050801	ion homeostasis	4 (100.00%)	1	1	2
GO:0006811	ion transport	4 (100.00%)	1	1	2
GO:0055072	iron ion homeostasis	4 (100.00%)	1	1	2
GO:0006826	iron ion transport	4 (100.00%)	1	1	2
GO:0048366	leaf development	4 (100.00%)	1	1	2
GO:0051179	localization	4 (100.00%)	1	1	2
GO:0008152	metabolic process	4 (100.00%)	1	1	2
GO:0055065	metal ion homeostasis	4 (100.00%)	1	1	2
GO:0030001	metal ion transport	4 (100.00%)	1	1	2
GO:0051704	multi-organism process	4 (100.00%)	1	1	2
GO:0007275	multicellular organismal development	4 (100.00%)	1	1	2
GO:0032501	multicellular organismal process	4 (100.00%)	1	1	2
GO:0015979	photosynthesis	4 (100.00%)	1	1	2
GO:0048827	phyllome development	4 (100.00%)	1	1	2
GO:0009791	post-embryonic development	4 (100.00%)	1	1	2
GO:0065008	regulation of biological quality	4 (100.00%)	1	1	2
GO:0000003	reproduction	4 (100.00%)	1	1	2
GO:0022414	reproductive process	4 (100.00%)	1	1	2
GO:0048608	reproductive structure development	4 (100.00%)	1	1	2
GO:0061458	reproductive system development	4 (100.00%)	1	1	2
GO:0009628	response to abiotic stimulus	4 (100.00%)	1	1	2
GO:0009617	response to bacterium	4 (100.00%)	1	1	2
GO:0009607	response to biotic stimulus	4 (100.00%)	1	1	2
GO:0042221	response to chemical	4 (100.00%)	1	1	2
GO:0009409	response to cold	4 (100.00%)	1	1	2
GO:0042542	response to hydrogen peroxide	4 (100.00%)	1	1	2
GO:0010035	response to inorganic substance	4 (100.00%)	1	1	2
GO:0010039	response to iron ion	4 (100.00%)	1	1	2
GO:0010038	response to metal ion	4 (100.00%)	1	1	2
GO:0051707	response to other organism	4 (100.00%)	1	1	2
GO:0006979	response to oxidative stress	4 (100.00%)	1	1	2
GO:1901700	response to oxygen-containing compound	4 (100.00%)	1	1	2
GO:0000302	response to reactive oxygen species	4 (100.00%)	1	1	2
GO:0050896	response to stimulus	4 (100.00%)	1	1	2
GO:0006950	response to stress	4 (100.00%)	1	1	2
GO:0009266	response to temperature stimulus	4 (100.00%)	1	1	2
GO:0010043	response to zinc ion	4 (100.00%)	1	1	2
GO:0048367	shoot system development	4 (100.00%)	1	1	2
GO:0044702	single organism reproductive process	4 (100.00%)	1	1	2
GO:0044707	single-multicellular organism process	4 (100.00%)	1	1	2
GO:0044763	single-organism cellular process	4 (100.00%)	1	1	2
GO:0044767	single-organism developmental process	4 (100.00%)	1	1	2
GO:0044699	single-organism process	4 (100.00%)	1	1	2
GO:0044765	single-organism transport	4 (100.00%)	1	1	2
GO:0048731	system development	4 (100.00%)	1	1	2
GO:0055076	transition metal ion homeostasis	4 (100.00%)	1	1	2
GO:0000041	transition metal ion transport	4 (100.00%)	1	1	2
GO:0006810	transport	4 (100.00%)	1	1	2

Molecular Function (back to top)

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GO	Description	#Associated genes	ath	bra	ptr
GO:0005488	binding	4 (100.00%)	1	1	2
GO:0043169	cation binding	4 (100.00%)	1	1	2
GO:0008199	ferric iron binding	4 (100.00%)	1	1	2
GO:0043167	ion binding	4 (100.00%)	1	1	2
GO:0005506	iron ion binding	4 (100.00%)	1	1	2
GO:0046872	metal ion binding	4 (100.00%)	1	1	2
GO:0046914	transition metal ion binding	4 (100.00%)	1	1	2
GO:0003824	catalytic activity	1 (25.00%)	1	0	0
GO:0004322	ferroxidase activity	1 (25.00%)	1	0	0
GO:0016491	oxidoreductase activity	1 (25.00%)	1	0	0
GO:0016722	oxidoreductase activity, oxidizing metal ions	1 (25.00%)	1	0	0
GO:0016724	oxidoreductase activity, oxidizing metal ions, oxygen as acceptor	1 (25.00%)	1	0	0

Cellular Component (back to top)

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GO	Description	#Associated genes	ath	bra	ptr
GO:0005623	cell	4 (100.00%)	1	1	2
GO:0044464	cell part	4 (100.00%)	1	1	2
GO:0009507	chloroplast	4 (100.00%)	1	1	2
GO:0044434	chloroplast part	4 (100.00%)	1	1	2
GO:0009570	chloroplast stroma	4 (100.00%)	1	1	2
GO:0009534	chloroplast thylakoid	4 (100.00%)	1	1	2
GO:0009535	chloroplast thylakoid membrane	4 (100.00%)	1	1	2
GO:0005737	cytoplasm	4 (100.00%)	1	1	2
GO:0044444	cytoplasmic part	4 (100.00%)	1	1	2
GO:0005622	intracellular	4 (100.00%)	1	1	2
GO:0043231	intracellular membrane-bounded organelle	4 (100.00%)	1	1	2
GO:0043229	intracellular organelle	4 (100.00%)	1	1	2
GO:0044446	intracellular organelle part	4 (100.00%)	1	1	2
GO:0044424	intracellular part	4 (100.00%)	1	1	2
GO:0016020	membrane	4 (100.00%)	1	1	2
GO:0043227	membrane-bounded organelle	4 (100.00%)	1	1	2
GO:0005739	mitochondrion	4 (100.00%)	1	1	2
GO:0043226	organelle	4 (100.00%)	1	1	2
GO:0044422	organelle part	4 (100.00%)	1	1	2
GO:0031984	organelle subcompartment	4 (100.00%)	1	1	2
GO:0034357	photosynthetic membrane	4 (100.00%)	1	1	2
GO:0009536	plastid	4 (100.00%)	1	1	2
GO:0044435	plastid part	4 (100.00%)	1	1	2
GO:0009532	plastid stroma	4 (100.00%)	1	1	2
GO:0031976	plastid thylakoid	4 (100.00%)	1	1	2
GO:0055035	plastid thylakoid membrane	4 (100.00%)	1	1	2
GO:0009579	thylakoid	4 (100.00%)	1	1	2
GO:0042651	thylakoid membrane	4 (100.00%)	1	1	2
GO:0044436	thylakoid part	4 (100.00%)	1	1	2