InterPro domains associated with a binding site
- Binding site
- Motif_500
- Name
- D1GMAUX28
- Description
- D1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes; Binding site of GmGT-2 which is the GT-2 family of transcription factors; GmGT-2 are down-regulated by light in a phytochrome-dependent manner
- #Associated genes
- 10
- #Associated InterPro terms
- 23
Click table-header(s) to enable sorting
InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
---|---|---|---|---|---|---|---|---|---|---|---|---|
IPR009818 | Ataxin-2, C-terminal | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
IPR001810 | F-box domain | 2 (20.00%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
IPR006553 | Leucine-rich repeat, cysteine-containing subtype | 2 (20.00%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
IPR002344 | Lupus La protein | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
IPR012677 | Nucleotide-binding, alpha-beta plait | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
IPR000504 | RNA recognition motif domain | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
IPR006630 | RNA-binding protein Lupus La | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
IPR019972 | Ribosomal protein L14 conserved site | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
IPR023571 | Ribosomal protein L14 domain | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
IPR000218 | Ribosomal protein L14b/L23e | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
IPR011991 | Winged helix-turn-helix DNA-binding domain | 2 (20.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
IPR000269 | Copper amine oxidase | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
IPR015798 | Copper amine oxidase, C-terminal | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
IPR016182 | Copper amine oxidase, N-terminal | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
IPR015800 | Copper amine oxidase, N2-terminal | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
IPR015801 | Copper amine oxidase, N2/N3-terminal | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
IPR015802 | Copper amine oxidase, N3-terminal | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
IPR025064 | Domain of unknown function DUF4005 | 1 (10.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
IPR000048 | IQ motif, EF-hand binding site | 1 (10.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
IPR011600 | Peptidase C14, caspase domain | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
IPR009675 | TPX2 | 1 (10.00%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR027329 | TPX2, C-terminal domain | 1 (10.00%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
IPR005735 | Zinc finger, LSD1-type | 1 (10.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |