PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_487
Name: ACIIIPVPAL2
Description: ACIII element found at -246 to -238 of bean PAL2 promoter; ACIII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene

#Associated genes: 58
#Associated InterPro terms: 124

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR011991	Winged helix-turn-helix DNA-binding domain	4 (6.90%)	0	0	1	1	0	1	1	0	0	0
IPR000883	Cytochrome c oxidase, subunit I	3 (5.17%)	0	0	0	0	0	0	0	2	0	1
IPR023616	Cytochrome c oxidase, subunit I domain	3 (5.17%)	0	0	0	0	0	0	0	2	0	1
IPR000232	Heat shock factor (HSF)-type, DNA-binding	3 (5.17%)	0	0	1	1	0	0	1	0	0	0
IPR027725	Heat shock transcription factor family	3 (5.17%)	0	0	1	1	0	0	1	0	0	0
IPR027709	Heat shock transcription factor, plant	3 (5.17%)	0	0	1	1	0	0	1	0	0	0
IPR001356	Homeobox domain	3 (5.17%)	0	0	0	0	2	0	0	0	0	1
IPR009057	Homeodomain-like	3 (5.17%)	0	0	0	0	2	0	0	0	0	1
IPR002913	START domain	3 (5.17%)	0	0	0	0	2	0	0	0	0	1
IPR023393	START-like domain	3 (5.17%)	0	0	0	0	2	0	0	0	0	1
IPR003123	Vacuolar sorting protein 9	3 (5.17%)	0	0	0	1	0	1	0	0	0	1
IPR013995	Vacuolar sorting protein 9, subgroup	3 (5.17%)	0	0	0	1	0	1	0	0	0	1
IPR013083	Zinc finger, RING/FYVE/PHD-type	3 (5.17%)	0	0	0	0	0	1	0	1	0	1
IPR003657	DNA-binding WRKY	2 (3.45%)	0	0	0	0	2	0	0	0	0	0
IPR011948	Dullard phosphatase domain, eukaryotic	2 (3.45%)	0	0	1	1	0	0	0	0	0	0
IPR023214	HAD-like domain	2 (3.45%)	0	0	1	1	0	0	0	0	0	0
IPR006818	Histone chaperone, ASF1-like	2 (3.45%)	1	0	0	0	0	0	0	0	1	0
IPR006594	LisH dimerisation motif	2 (3.45%)	0	0	0	0	0	0	0	1	1	0
IPR013720	LisH dimerisation motif, subgroup	2 (3.45%)	0	0	0	0	0	0	0	1	1	0
IPR004274	NLI interacting factor	2 (3.45%)	0	0	1	1	0	0	0	0	0	0
IPR001680	WD40 repeat	2 (3.45%)	0	0	0	0	0	0	0	1	1	0
IPR019775	WD40 repeat, conserved site	2 (3.45%)	0	0	0	0	0	0	0	1	1	0
IPR017986	WD40-repeat-containing domain	2 (3.45%)	0	0	0	0	0	0	0	1	1	0
IPR015943	WD40/YVTN repeat-like-containing domain	2 (3.45%)	0	0	0	0	0	0	0	1	1	0
IPR001841	Zinc finger, RING-type	2 (3.45%)	0	0	0	0	0	0	0	1	0	1
IPR003593	AAA+ ATPase domain	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR011527	ABC transporter type 1, transmembrane domain	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR017871	ABC transporter, conserved site	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR001140	ABC transporter, transmembrane domain	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR003439	ABC transporter-like	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR011761	ATP-grasp fold	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR013815	ATP-grasp fold, subdomain 1	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR013816	ATP-grasp fold, subdomain 2	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR013537	Acetyl-CoA carboxylase, central domain	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR011763	Acetyl-coenzyme A carboxyltransferase, C-terminal	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR003100	Argonaute/Dicer protein, PAZ domain	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR001870	B30.2/SPRY domain	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR005482	Biotin carboxylase, C-terminal	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR011764	Biotin carboxylation domain	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR000089	Biotin/lipoyl attachment	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR013591	Brevis radix (BRX) domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR017888	CYC/TB1, R domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR005481	Carbamoyl-phosphate synthase, large subunit, N-terminal	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR000022	Carboxyl transferase	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR004294	Carotenoid oxygenase	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR023213	Chloramphenicol acetyltransferase-like domain	1 (1.72%)	0	0	0	0	0	0	1	0	0	0
IPR008985	Concanavalin A-like lectin/glucanases superfamily	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR023615	Cytochrome c oxidase, subunit I, copper-binding site	1 (1.72%)	0	0	0	0	0	0	0	1	0	0
IPR014811	Domain of unknown function DUF1785	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR015633	E2F Family	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR018247	EF-Hand 1, calcium-binding site	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR002048	EF-hand domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR011992	EF-hand domain pair	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR027246	Eukaryotic porin/Tom40	1 (1.72%)	0	0	0	0	0	0	1	0	0	0
IPR006527	F-box associated domain, type 1	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR017451	F-box associated interaction domain	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR001810	F-box domain	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR000782	FAS1 domain	1 (1.72%)	1	0	0	0	0	0	0	0	0	0
IPR019443	FMP27, C-terminal	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR019441	FMP27, GFWDK domain	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR000306	FYVE zinc finger	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR012312	Haemerythrin/HHE cation-binding motif	1 (1.72%)	0	0	0	0	0	0	0	1	0	0
IPR009072	Histone-fold	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR017970	Homeobox, conserved site	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR011498	Kelch repeat type 2	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR015915	Kelch-type beta propeller	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR003441	NAC domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	1 (1.72%)	0	0	0	0	0	0	0	0	1	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR001610	PAC motif	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR000014	PAS domain	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR000700	PAS-associated, C-terminal	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR002885	Pentatricopeptide repeat	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR001563	Peptidase S10, serine carboxypeptidase	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR018202	Peptidase S10, serine carboxypeptidase, active site	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR004843	Phosphoesterase domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR001849	Pleckstrin homology domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR024774	Pleckstrin homology domain, Mcp5-type	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR011993	Pleckstrin homology-like domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR023614	Porin domain	1 (1.72%)	0	0	0	0	0	0	1	0	0	0
IPR016185	Pre-ATP-grasp domain	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR000719	Protein kinase domain	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR017441	Protein kinase, ATP binding site	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR011009	Protein kinase-like domain	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR012438	Protein of unknown function DUF1639	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR013176	Protein of unknown function DUF1712, fungi	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR018450	Reactive oxygen species modulator 1	1 (1.72%)	0	0	0	0	0	0	1	0	0	0
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR000408	Regulator of chromosome condensation, RCC1	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR012337	Ribonuclease H-like domain	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR004039	Rubredoxin-type fold	1 (1.72%)	0	0	0	0	0	0	0	1	0	0
IPR011054	Rudiment single hybrid motif	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR003034	SAP domain	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR003877	SPla/RYanodine receptor SPRY	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR018355	SPla/RYanodine receptor subgroup	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR008271	Serine/threonine-protein kinase, active site	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR006186	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR011053	Single hybrid motif	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR017916	Steadiness box	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR003165	Stem cell self-renewal protein Piwi	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR001660	Sterile alpha motif domain	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR021129	Sterile alpha motif, type 1	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR013761	Sterile alpha motif/pointed domain	1 (1.72%)	0	0	0	1	0	0	0	0	0	0
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR003958	Transcription factor CBF/NF-Y/archaeal histone	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR003316	Transcription factor E2F/dimerisation partner (TDP)	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR017887	Transcription factor TCP subgroup	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR003957	Transcription factor, NFYB/HAP3 subunit	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR003956	Transcription factor, NFYB/HAP3, conserved site	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR005333	Transcription factor, TCP	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR003480	Transferase	1 (1.72%)	0	0	0	0	0	0	1	0	0	0
IPR008883	Ubiquitin E2 variant, N-terminal	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR019474	Ubiquitin conjugation factor E4, core	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR008545	WEB family	1 (1.72%)	0	0	1	0	0	0	0	0	0	0
IPR000571	Zinc finger, CCCH-type	1 (1.72%)	0	0	0	0	0	0	0	0	0	1
IPR001878	Zinc finger, CCHC-type	1 (1.72%)	0	1	0	0	0	0	0	0	0	0
IPR008913	Zinc finger, CHY-type	1 (1.72%)	0	0	0	0	0	0	0	1	0	0
IPR017921	Zinc finger, CTCHY-type	1 (1.72%)	0	0	0	0	0	0	0	1	0	0
IPR017455	Zinc finger, FYVE-related	1 (1.72%)	0	0	0	0	0	1	0	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	1 (1.72%)	0	0	0	0	0	1	0	0	0	0