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BLAST
WorkbenchInterPro domains associated with a binding site
- Binding site
- Motif_424
- Name
- GATA-1
- Description
- Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics
- #Associated genes
- 16
- #Associated InterPro terms
- 24
Click table-header(s) to enable sorting
| InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IPR027073 | 5'-3' exoribonuclease | 2 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR004859 | Putative 5-3 exonuclease | 2 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR002653 | Zinc finger, A20-type | 2 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR000058 | Zinc finger, AN1-type | 2 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR001878 | Zinc finger, CCHC-type | 2 (12.50%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
| IPR013785 | Aldolase-type TIM barrel | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR012552 | DVL | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR024286 | Domain of unknown function DUF3700 | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| IPR027492 | Dual-specificity RNA methyltransferase RlmN | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR020472 | G-protein beta WD-40 repeat | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR027443 | Isopenicillin N synthase-like | 1 (6.25%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR026962 | Katanin p80 subunit B1 | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR028021 | Katanin p80 subunit, C-terminal | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR012463 | Ninja | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR005123 | Oxoglutarate/iron-dependent dioxygenase | 1 (6.25%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR007197 | Radical SAM | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR005162 | Retrotransposon gag domain | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR004383 | Ribosomal RNA large subunit methyltransferase RlmN/Cfr | 1 (6.25%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR001680 | WD40 repeat | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR019775 | WD40 repeat, conserved site | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR017986 | WD40-repeat-containing domain | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | 1 (6.25%) | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR001841 | Zinc finger, RING-type | 1 (6.25%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | 1 (6.25%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |