PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_400
Name: ABREAZMRAB28
Description: ABA-responsive element (ABRE A) found at -148 to -139 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues

#Associated genes: 85
#Associated MapMan terms: 72

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	vvi
27	RNA	17 (20.00%)	0	0	2	9	2	2	2
27.3	RNA.regulation of transcription	17 (20.00%)	0	0	2	9	2	2	2
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	7 (8.24%)	0	0	2	4	0	0	1
29	protein	6 (7.06%)	0	0	0	3	1	0	2
29.4	protein.postranslational modification	5 (5.88%)	0	0	0	3	0	0	2
20	stress	4 (4.71%)	1	1	1	0	0	1	0
20.2	stress.abiotic	4 (4.71%)	1	1	1	0	0	1	0
11	lipid metabolism	3 (3.53%)	0	0	1	0	0	1	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	3 (3.53%)	0	0	0	1	1	0	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (3.53%)	0	0	2	0	0	1	0
1	PS	2 (2.35%)	0	0	1	1	0	0	0
1.1	PS.lightreaction	2 (2.35%)	0	0	1	1	0	0	0
1.1.1	PS.lightreaction.photosystem II	2 (2.35%)	0	0	1	1	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	2 (2.35%)	0	0	1	0	0	1	0
11.3.5	lipid metabolism.Phospholipid synthesis.diacylglycerol kinase	2 (2.35%)	0	0	1	0	0	1	0
16	secondary metabolism	2 (2.35%)	0	0	0	0	1	1	0
19	tetrapyrrole synthesis	2 (2.35%)	0	0	0	0	0	1	1
19.16	tetrapyrrole synthesis.chlorophyll b synthase	2 (2.35%)	0	0	0	0	0	1	1
20.2.1	stress.abiotic.heat	2 (2.35%)	0	0	1	0	0	1	0
20.2.3	stress.abiotic.drought/salt	2 (2.35%)	1	1	0	0	0	0	0
21	redox	2 (2.35%)	0	0	0	0	1	1	0
24	Biodegradation of Xenobiotics	2 (2.35%)	0	0	0	0	0	0	2
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (2.35%)	0	0	0	2	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (2.35%)	0	0	0	2	0	0	0
29.4.1	protein.postranslational modification.kinase	2 (2.35%)	0	0	0	2	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (2.35%)	0	0	0	2	0	0	0
30	signalling	2 (2.35%)	0	0	0	2	0	0	0
30.2	signalling.receptor kinases	2 (2.35%)	0	0	0	2	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	2 (2.35%)	0	0	0	2	0	0	0
30.2.99	signalling.receptor kinases.misc	2 (2.35%)	0	0	0	2	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (1.18%)	0	0	0	1	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	1 (1.18%)	0	0	1	0	0	0	0
2	major CHO metabolism	1 (1.18%)	0	0	0	0	0	0	1
2.1	major CHO metabolism.synthesis	1 (1.18%)	0	0	0	0	0	0	1
2.1.2	major CHO metabolism.synthesis.starch	1 (1.18%)	0	0	0	0	0	0	1
2.1.2.3	major CHO metabolism.synthesis.starch.starch branching	1 (1.18%)	0	0	0	0	0	0	1
3	minor CHO metabolism	1 (1.18%)	0	0	0	0	0	1	0
3.1	minor CHO metabolism.raffinose family	1 (1.18%)	0	0	0	0	0	1	0
10	cell wall	1 (1.18%)	0	0	0	0	0	1	0
10.6	cell wall.degradation	1 (1.18%)	0	0	0	0	0	1	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (1.18%)	0	0	0	0	0	1	0
11.1	lipid metabolism.FA synthesis and FA elongation	1 (1.18%)	0	0	0	0	0	0	1
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase	1 (1.18%)	0	0	0	0	0	0	1
16.1	secondary metabolism.isoprenoids	1 (1.18%)	0	0	0	0	0	1	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	1 (1.18%)	0	0	0	0	0	1	0
16.1.4.4	secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase	1 (1.18%)	0	0	0	0	0	1	0
16.8	secondary metabolism.flavonoids	1 (1.18%)	0	0	0	0	1	0	0
16.8.2	secondary metabolism.flavonoids.chalcones	1 (1.18%)	0	0	0	0	1	0	0
17	hormone metabolism	1 (1.18%)	0	0	0	0	0	1	0
17.4	hormone metabolism.cytokinin	1 (1.18%)	0	0	0	0	0	1	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (1.18%)	0	0	0	0	0	1	0
18	Co-factor and vitamine metabolism	1 (1.18%)	0	0	0	0	0	1	0
18.2	Co-factor and vitamine metabolism.thiamine	1 (1.18%)	0	0	0	0	0	1	0
21.2	redox.ascorbate and glutathione	1 (1.18%)	0	0	0	0	1	0	0
21.4	redox.glutaredoxins	1 (1.18%)	0	0	0	0	0	1	0
24.2	Biodegradation of Xenobiotics.lactoylglutathione lyase	1 (1.18%)	0	0	0	0	0	0	1
3.1.2	minor CHO metabolism.raffinose family.raffinose synthases	1 (1.18%)	0	0	0	0	0	1	0
3.1.2.2	minor CHO metabolism.raffinose family.raffinose synthases.putative	1 (1.18%)	0	0	0	0	0	1	0
26	misc	1 (1.18%)	0	0	0	0	1	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (1.18%)	0	0	0	0	1	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	1 (1.18%)	0	0	0	0	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (1.18%)	0	0	0	0	1	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (1.18%)	0	0	0	0	0	1	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (1.18%)	0	0	0	0	0	1	0
28	DNA	1 (1.18%)	0	0	0	0	1	0	0
28.1	DNA.synthesis/chromatin structure	1 (1.18%)	0	0	0	0	1	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (1.18%)	0	0	0	0	1	0	0
29.3	protein.targeting	1 (1.18%)	0	0	0	0	1	0	0
29.3.4	protein.targeting.secretory pathway	1 (1.18%)	0	0	0	0	1	0	0
29.3.4.2	protein.targeting.secretory pathway.golgi	1 (1.18%)	0	0	0	0	1	0	0
31	cell	1 (1.18%)	0	0	0	0	0	1	0
31.1	cell.organisation	1 (1.18%)	0	0	0	0	0	1	0