PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_368
Name: CBF1 BS in cor15a
Description: Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs

#Associated genes: 190
#Associated InterPro terms: 138

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR001611	Leucine-rich repeat	21 (11.05%)	2	2	2	2	2	5	4	0	0	2
IPR003591	Leucine-rich repeat, typical subtype	18 (9.47%)	2	2	2	2	1	5	3	0	0	1
IPR000719	Protein kinase domain	16 (8.42%)	2	1	1	2	3	3	2	1	0	1
IPR011009	Protein kinase-like domain	16 (8.42%)	2	1	1	2	3	3	2	1	0	1
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	15 (7.89%)	2	1	1	2	2	3	2	1	0	1
IPR008271	Serine/threonine-protein kinase, active site	15 (7.89%)	2	1	1	2	2	3	2	1	0	1
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	14 (7.37%)	2	1	1	2	2	3	2	0	0	1
IPR013210	Leucine-rich repeat-containing N-terminal, type 2	14 (7.37%)	2	1	1	2	2	3	2	0	0	1
IPR001471	AP2/ERF domain	13 (6.84%)	1	0	2	2	4	2	2	0	0	0
IPR016177	DNA-binding domain	13 (6.84%)	1	0	2	2	4	2	2	0	0	0
IPR004839	Aminotransferase, class I/classII	11 (5.79%)	0	1	0	1	1	2	1	1	1	3
IPR004367	Cyclin, C-terminal domain	11 (5.79%)	0	0	1	1	2	2	1	1	1	2
IPR006671	Cyclin, N-terminal	11 (5.79%)	0	0	1	1	2	2	1	1	1	2
IPR013763	Cyclin-like	11 (5.79%)	0	0	1	1	2	2	1	1	1	2
IPR015424	Pyridoxal phosphate-dependent transferase	11 (5.79%)	0	1	0	1	1	2	1	1	1	3
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	11 (5.79%)	0	1	0	1	1	2	1	1	1	3
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	11 (5.79%)	0	1	0	1	1	2	1	1	1	3
IPR003311	AUX/IAA protein	9 (4.74%)	1	2	1	3	0	0	0	1	1	0
IPR004838	Aminotransferases, class-I, pyridoxal-phosphate-binding site	9 (4.74%)	0	1	0	1	1	2	1	1	1	1
IPR011525	Aux/IAA-ARF-dimerisation	9 (4.74%)	1	2	1	3	0	0	0	1	1	0
IPR023214	HAD-like domain	8 (4.21%)	0	0	2	1	2	0	1	1	0	1
IPR006379	HAD-superfamily hydrolase, subfamily IIB	8 (4.21%)	0	0	2	1	2	0	1	1	0	1
IPR025875	Leucine rich repeat 4	8 (4.21%)	0	1	2	0	1	1	2	0	0	1
IPR003337	Trehalose-phosphatase	8 (4.21%)	0	0	2	1	2	0	1	1	0	1
IPR012552	DVL	7 (3.68%)	1	0	0	0	2	2	0	1	1	0
IPR007087	Zinc finger, C2H2	6 (3.16%)	1	2	0	0	2	0	1	0	0	0
IPR006734	Protein of unknown function DUF597	5 (2.63%)	0	0	0	0	0	2	0	1	1	1
IPR005516	Remorin, C-terminal	5 (2.63%)	0	0	0	0	1	1	0	2	1	0
IPR001128	Cytochrome P450	4 (2.11%)	0	0	1	1	1	0	0	0	0	1
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	4 (2.11%)	1	2	0	0	1	0	0	0	0	0
IPR003851	Zinc finger, Dof-type	4 (2.11%)	0	0	0	0	0	2	1	0	0	1
IPR001830	Glycosyl transferase, family 20	3 (1.58%)	0	0	1	1	0	0	0	1	0	0
IPR009057	Homeodomain-like	3 (1.58%)	0	1	0	0	1	0	0	0	0	1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	3 (1.58%)	0	0	1	0	0	2	0	0	0	0
IPR003441	NAC domain	3 (1.58%)	0	0	0	0	0	1	0	1	1	0
IPR016040	NAD(P)-binding domain	3 (1.58%)	0	0	0	2	0	0	1	0	0	0
IPR012677	Nucleotide-binding, alpha-beta plait	3 (1.58%)	0	0	0	0	0	1	2	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	3 (1.58%)	1	0	1	0	0	0	1	0	0	0
IPR000504	RNA recognition motif domain	3 (1.58%)	0	0	0	0	0	1	2	0	0	0
IPR004000	Actin-related protein	2 (1.05%)	0	1	0	0	0	0	1	0	0	0
IPR027668	Actin-related protein 8/Plant actin-related protein 9	2 (1.05%)	0	1	0	0	0	0	1	0	0	0
IPR000008	C2 domain	2 (1.05%)	0	0	1	0	0	1	0	0	0	0
IPR002401	Cytochrome P450, E-class, group I	2 (1.05%)	0	0	0	0	1	0	0	0	0	1
IPR000620	Drug/metabolite transporter	2 (1.05%)	0	1	1	0	0	0	0	0	0	0
IPR001356	Homeobox domain	2 (1.05%)	0	1	0	0	0	0	0	0	0	1
IPR015915	Kelch-type beta propeller	2 (1.05%)	0	0	0	0	1	0	0	0	0	1
IPR002885	Pentatricopeptide repeat	2 (1.05%)	0	0	0	0	0	0	2	0	0	0
IPR017441	Protein kinase, ATP binding site	2 (1.05%)	0	0	0	0	1	0	0	1	0	0
IPR025322	Protein of unknown function DUF4228, plant	2 (1.05%)	0	0	0	0	2	0	0	0	0	0
IPR011990	Tetratricopeptide-like helical	2 (1.05%)	0	0	0	0	0	0	2	0	0	0
IPR013766	Thioredoxin domain	2 (1.05%)	1	0	0	0	0	0	1	0	0	0
IPR012336	Thioredoxin-like fold	2 (1.05%)	1	0	0	0	0	0	1	0	0	0
IPR005202	Transcription factor GRAS	2 (1.05%)	0	0	0	1	0	0	1	0	0	0
IPR000608	Ubiquitin-conjugating enzyme, E2	2 (1.05%)	0	0	0	0	2	0	0	0	0	0
IPR023313	Ubiquitin-conjugating enzyme, active site	2 (1.05%)	0	0	0	0	2	0	0	0	0	0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	2 (1.05%)	0	0	0	0	2	0	0	0	0	0
IPR019786	Zinc finger, PHD-type, conserved site	2 (1.05%)	0	0	0	0	2	0	0	0	0	0
IPR002912	ACT domain	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR025110	AMP-binding enzyme C-terminal domain	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR020845	AMP-binding, conserved site	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR000873	AMP-dependent synthetase/ligase	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR016181	Acyl-CoA N-acyltransferase	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR021998	Alfin	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR000073	Alpha/beta hydrolase fold-1	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR013094	Alpha/beta hydrolase fold-3	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR018082	AmbAllergen	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR000120	Amidase	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR023631	Amidase signature domain	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR023271	Aquaporin-like	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR001164	Arf GTPase activating protein	1 (0.53%)	0	0	0	0	0	0	0	0	1	0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	1 (0.53%)	0	0	0	0	0	1	0	0	0	0
IPR006045	Cupin 1	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR002403	Cytochrome P450, E-class, group IV	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR017972	Cytochrome P450, conserved site	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR011545	DNA/RNA helicase, DEAD/DEAH box type, N-terminal	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR000767	Disease resistance protein	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR005788	Disulphide isomerase	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR008406	Dormancyauxin associated	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR001810	F-box domain	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR012349	FMN-binding split barrel	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR004993	GH3 auxin-responsive promoter	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR000182	GNAT domain	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR015916	Galactose oxidase, beta-propeller	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR011043	Galactose oxidase/kelch, beta-propeller	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR002347	Glucose/ribitol dehydrogenase	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR002495	Glycosyl transferase, family 8	1 (0.53%)	0	0	0	0	0	0	0	0	1	0
IPR001650	Helicase, C-terminal	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR014001	Helicase, superfamily 1/2, ATP-binding domain	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR008422	Homeobox KN domain	1 (0.53%)	0	1	0	0	0	0	0	0	0	0
IPR017970	Homeobox, conserved site	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR027923	Hydrophobic seed protein	1 (0.53%)	0	0	0	0	0	1	0	0	0	0
IPR006652	Kelch repeat type 1	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR003106	Leucine zipper, homeobox-associated	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR002168	Lipase, GDXG, active site	1 (0.53%)	0	0	0	0	0	0	0	0	0	1
IPR000425	Major intrinsic protein	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR022357	Major intrinsic protein, conserved site	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR013216	Methyltransferase type 11	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR017930	Myb domain	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR006447	Myb domain, plants	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR002182	NB-ARC	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR012340	Nucleic acid-binding, OB-fold	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR006563	POX domain	1 (0.53%)	0	1	0	0	0	0	0	0	0	0
IPR002022	Pectate lyase/Amb allergen	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR012334	Pectin lyase fold	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR011050	Pectin lyase fold/virulence factor	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR002500	Phosphoadenosine phosphosulphate reductase	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR000270	Phox/Bem1p	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR000629	RNA helicase, ATP-dependent, DEAD-box, conserved site	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR014014	RNA helicase, DEAD-box type, Q motif	1 (0.53%)	0	0	1	0	0	0	0	0	0	0
IPR007201	RNA recognition motif 2	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR002041	Ran GTPase	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR022666	Ribosomal Proteins L2, RNA binding domain	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR002171	Ribosomal protein L2	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR008195	Ribosomal protein L34Ae	1 (0.53%)	0	0	0	0	0	1	0	0	0	0
IPR011051	RmlC-like cupin domain	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR014710	RmlC-like jelly roll fold	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR001005	SANT/Myb domain	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR023796	Serpin domain	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR000215	Serpin family	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR023795	Serpin, conserved site	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR015554	Serpin, plant	1 (0.53%)	0	0	0	1	0	0	0	0	0	0
IPR005225	Small GTP-binding protein domain	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR001806	Small GTPase superfamily	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR003579	Small GTPase superfamily, Rab type	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR020849	Small GTPase superfamily, Ras type	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR003578	Small GTPase superfamily, Rho type	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR005746	Thioredoxin	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR017937	Thioredoxin, conserved site	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR004508	Thioredoxin-independent 5'-adenylylsulphate reductase	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	1 (0.53%)	0	0	0	0	0	0	1	0	0	0
IPR025422	Transcription factor TGA like domain	1 (0.53%)	1	0	0	0	0	0	0	0	0	0
IPR015880	Zinc finger, C2H2-like	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR019787	Zinc finger, PHD-finger	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR001965	Zinc finger, PHD-type	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR013083	Zinc finger, RING/FYVE/PHD-type	1 (0.53%)	0	0	0	0	1	0	0	0	0	0
IPR001876	Zinc finger, RanBP2-type	1 (0.53%)	0	0	0	0	0	0	0	0	0	1