PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_361
Name: SORLREP4AT
Description: one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; Common in circadian-regulated promoters; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data

#Associated genes: 119
#Associated MapMan terms: 75

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	24 (20.17%)	0	4	1	7	6	3	1	2
27.3	RNA.regulation of transcription	19 (15.97%)	0	3	1	6	5	2	1	1
27.3.99	RNA.regulation of transcription.unclassified	6 (5.04%)	0	1	0	5	0	0	0	0
29	protein	6 (5.04%)	0	0	1	2	2	0	1	0
30	signalling	6 (5.04%)	1	0	0	2	0	1	0	2
26	misc	5 (4.20%)	1	1	0	2	0	1	0	0
1	PS	4 (3.36%)	0	0	0	2	2	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	4 (3.36%)	0	0	0	0	3	0	0	1
28	DNA	4 (3.36%)	0	0	0	3	0	0	0	1
29.5	protein.degradation	4 (3.36%)	0	0	1	2	1	0	0	0
30.4	signalling.phosphinositides	4 (3.36%)	1	0	0	1	0	0	0	2
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	4 (3.36%)	1	0	0	1	0	0	0	2
33	development	4 (3.36%)	1	0	0	2	1	0	0	0
33.99	development.unspecified	4 (3.36%)	1	0	0	2	1	0	0	0
1.3	PS.calvin cycle	3 (2.52%)	0	0	0	1	2	0	0	0
16	secondary metabolism	3 (2.52%)	0	0	0	0	1	1	0	1
26.7	misc.oxidases - copper, flavone etc	3 (2.52%)	1	0	0	2	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (2.52%)	0	0	0	0	1	1	1	0
27.4	RNA.RNA binding	3 (2.52%)	0	0	0	0	1	1	0	1
34	transport	3 (2.52%)	0	0	0	2	1	0	0	0
1.3.1	PS.calvin cycle.rubisco large subunit	2 (1.68%)	0	0	0	0	2	0	0	0
3	minor CHO metabolism	2 (1.68%)	0	0	0	0	0	2	0	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	2 (1.68%)	0	0	0	0	1	0	0	1
16.1.1.4	secondary metabolism.isoprenoids.non-mevalonate pathway.CMK	2 (1.68%)	0	0	0	0	1	0	0	1
3.4	minor CHO metabolism.myo-inositol	2 (1.68%)	0	0	0	0	0	2	0	0
16.1	secondary metabolism.isoprenoids	2 (1.68%)	0	0	0	0	1	0	0	1
3.4.4	minor CHO metabolism.myo-inositol.myo inositol oxygenases	2 (1.68%)	0	0	0	0	0	2	0	0
20	stress	2 (1.68%)	0	0	0	0	2	0	0	0
21	redox	2 (1.68%)	0	0	0	1	0	0	1	0
27.1	RNA.processing	2 (1.68%)	0	1	0	1	0	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	2 (1.68%)	0	0	0	0	1	1	0	0
28.1	DNA.synthesis/chromatin structure	2 (1.68%)	0	0	0	1	0	0	0	1
28.2	DNA.repair	2 (1.68%)	0	0	0	2	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.68%)	0	0	0	0	1	0	0	1
29.5.3	protein.degradation.cysteine protease	2 (1.68%)	0	0	1	1	0	0	0	0
30.2	signalling.receptor kinases	2 (1.68%)	0	0	0	1	0	1	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	2 (1.68%)	0	0	0	1	0	1	0	0
31	cell	2 (1.68%)	0	0	0	2	0	0	0	0
31.1	cell.organisation	2 (1.68%)	0	0	0	2	0	0	0	0
1.1	PS.lightreaction	1 (0.84%)	0	0	0	1	0	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.84%)	0	0	0	1	0	0	0	0
1.3.7	PS.calvin cycle.FBPase	1 (0.84%)	0	0	0	1	0	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.84%)	0	0	0	0	1	0	0	0
10	cell wall	1 (0.84%)	0	0	0	1	0	0	0	0
10.7	cell wall.modification	1 (0.84%)	0	0	0	1	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.84%)	0	0	0	0	0	1	0	0
17	hormone metabolism	1 (0.84%)	1	0	0	0	0	0	0	0
17.8	hormone metabolism.salicylic acid	1 (0.84%)	1	0	0	0	0	0	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	1 (0.84%)	1	0	0	0	0	0	0	0
20.1	stress.biotic	1 (0.84%)	0	0	0	0	1	0	0	0
20.2	stress.abiotic	1 (0.84%)	0	0	0	0	1	0	0	0
20.2.1	stress.abiotic.heat	1 (0.84%)	0	0	0	0	1	0	0	0
21.1	redox.thioredoxin	1 (0.84%)	0	0	0	1	0	0	0	0
21.1.2	redox.thioredoxin.QSOX	1 (0.84%)	0	0	0	1	0	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.84%)	0	0	0	0	0	0	1	0
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.84%)	0	0	0	0	0	0	1	0
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	1 (0.84%)	0	0	0	0	0	0	1	0
26.10	misc.cytochrome P450	1 (0.84%)	0	0	0	0	0	1	0	0
26.6	misc.O-methyl transferases	1 (0.84%)	0	1	0	0	0	0	0	0
27.1.1	RNA.processing.splicing	1 (0.84%)	0	0	0	1	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.84%)	0	0	1	0	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.84%)	0	1	0	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.84%)	0	0	0	1	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.84%)	0	1	0	0	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.84%)	0	0	0	1	0	0	0	0
29.2.1.1.1.2.14	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14	1 (0.84%)	0	1	0	0	0	0	0	0
29.5.1	protein.degradation.subtilases	1 (0.84%)	0	0	0	0	1	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.84%)	0	0	0	1	0	0	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.84%)	0	0	0	1	0	0	0	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	1 (0.84%)	0	0	0	0	1	0	0	0
29.4	protein.postranslational modification	1 (0.84%)	0	0	0	0	1	0	0	0
29.8	protein.assembly and cofactor ligation	1 (0.84%)	0	0	0	0	0	0	1	0
34.15	transport.potassium	1 (0.84%)	0	0	0	1	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.84%)	0	0	0	0	1	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.84%)	0	0	0	1	0	0	0	0