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WorkbenchMapMan terms associated with a binding site
- Binding site
- Motif_298
- Name
- GMHDLGMVSPB
- Description
- Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein
- #Associated genes
- 46
- #Associated MapMan terms
- 31
Click table-header(s) to enable sorting
| MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27 | RNA | 14 (30.43%) | 5 | 1 | 0 | 1 | 3 | 2 | 2 | 0 | 0 | 0 |
| 27.3 | RNA.regulation of transcription | 12 (26.09%) | 4 | 1 | 0 | 1 | 3 | 1 | 2 | 0 | 0 | 0 |
| 10 | cell wall | 8 (17.39%) | 0 | 1 | 0 | 0 | 6 | 0 | 0 | 1 | 0 | 0 |
| 10.6 | cell wall.degradation | 6 (13.04%) | 0 | 1 | 0 | 0 | 4 | 0 | 0 | 1 | 0 | 0 |
| 10.6.3 | cell wall.degradation.pectate lyases and polygalacturonases | 6 (13.04%) | 0 | 1 | 0 | 0 | 4 | 0 | 0 | 1 | 0 | 0 |
| 27.3.5 | RNA.regulation of transcription.ARR | 6 (13.04%) | 2 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 |
| 10.2 | cell wall.cellulose synthesis | 2 (4.35%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| 10.2.1 | cell wall.cellulose synthesis.cellulose synthase | 2 (4.35%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| 16 | secondary metabolism | 2 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
| 16.10 | secondary metabolism.simple phenols | 2 (4.35%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
| 27.3.22 | RNA.regulation of transcription.HB,Homeobox transcription factor family | 2 (4.35%) | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 27.3.32 | RNA.regulation of transcription.WRKY domain transcription factor family | 2 (4.35%) | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 1 | PS | 1 (2.17%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 1.3 | PS.calvin cycle | 1 (2.17%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 1.3.1 | PS.calvin cycle.rubisco large subunit | 1 (2.17%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 8 | TCA / org transformation | 1 (2.17%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 8.3 | TCA / org transformation.carbonic anhydrases | 1 (2.17%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 20 | stress | 1 (2.17%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 20.1 | stress.biotic | 1 (2.17%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 26 | misc | 1 (2.17%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 26.18 | misc.invertase/pectin methylesterase inhibitor family protein | 1 (2.17%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 27.1 | RNA.processing | 1 (2.17%) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 27.3.11 | RNA.regulation of transcription.C2H2 zinc finger family | 1 (2.17%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| 27.3.9 | RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family | 1 (2.17%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 27.4 | RNA.RNA binding | 1 (2.17%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| 29 | protein | 1 (2.17%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 29.6 | protein.folding | 1 (2.17%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| 33 | development | 1 (2.17%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 33.99 | development.unspecified | 1 (2.17%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| 34 | transport | 1 (2.17%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 34.99 | transport.misc | 1 (2.17%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |