MapMan terms associated with a binding site

Binding site
Motif_256
Name
RHE_element
Description
Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns
#Associated genes
777
#Associated MapMan terms
230

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA178 (22.91%)101702043262213027
27.3RNA.regulation of transcription168 (21.62%)91701940232211027
29protein59 (7.59%)760481412206
30signalling49 (6.31%)230815142005
29.4protein.postranslational modification38 (4.89%)5603686004
17hormone metabolism36 (4.63%)3505862106
20stress31 (3.99%)1006966102
33development31 (3.99%)2102987002
34transport30 (3.86%)2500852008
33.99development.unspecified29 (3.73%)2102977001
26misc27 (3.47%)2502655002
27.3.11RNA.regulation of transcription.C2H2 zinc finger family27 (3.47%)2403453402
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family27 (3.47%)2502533106
20.2stress.abiotic26 (3.35%)1006764101
30.2signalling.receptor kinases20 (2.57%)0304830002
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family18 (2.32%)2201312106
20.2.99stress.abiotic.unspecified16 (2.06%)0005441101
28DNA16 (2.06%)0000644002
34.16transport.ABC transporters and multidrug resistance systems15 (1.93%)1100551002
30.11signalling.light14 (1.80%)1003351001
16secondary metabolism12 (1.54%)2102231100
27.3.25RNA.regulation of transcription.MYB domain transcription factor family12 (1.54%)0002244000
27.3.99RNA.regulation of transcription.unclassified12 (1.54%)1002322002
29.5protein.degradation12 (1.54%)2000233200
17.2hormone metabolism.auxin11 (1.42%)0100521002
17.5hormone metabolism.ethylene11 (1.42%)0103321001
29.4.1protein.postranslational modification.kinase11 (1.42%)2300301002
10cell wall10 (1.29%)0100043002
30.2.11signalling.receptor kinases.leucine rich repeat XI10 (1.29%)0200510002
17.5.2hormone metabolism.ethylene.signal transduction9 (1.16%)0002321001
30.2.17signalling.receptor kinases.DUF 269 (1.16%)0104310000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family8 (1.03%)1001211101
27.3.67RNA.regulation of transcription.putative transcription regulator8 (1.03%)0201400001
28.1DNA.synthesis/chromatin structure8 (1.03%)0000331001
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII8 (1.03%)0300201002
29.5.11protein.degradation.ubiquitin8 (1.03%)1000122200
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX8 (1.03%)2001120101
1PS7 (0.90%)0002121001
15metal handling7 (0.90%)1100110003
16.1secondary metabolism.isoprenoids7 (0.90%)0002221000
17.7hormone metabolism.jasmonate7 (0.90%)1202010001
21redox7 (0.90%)1101110101
26.2misc.UDP glucosyl and glucoronyl transferases7 (0.90%)0101021002
27.3.35RNA.regulation of transcription.bZIP transcription factor family7 (0.90%)1200310000
30.3signalling.calcium7 (0.90%)1001041000
31cell7 (0.90%)0002110003
1.1PS.lightreaction6 (0.77%)0002120001
11lipid metabolism6 (0.77%)1201110000
16.1.1secondary metabolism.isoprenoids.non-mevalonate pathway6 (0.77%)0001221000
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated6 (0.77%)0000311001
17.7.2hormone metabolism.jasmonate.signal transduction6 (0.77%)1202010000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family6 (0.77%)0000201102
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family6 (0.77%)0002202000
27.4RNA.RNA binding6 (0.77%)0001310100
30.5signalling.G-proteins6 (0.77%)0000410001
1.1.1PS.lightreaction.photosystem II5 (0.64%)0002120000
15.2metal handling.binding, chelation and storage5 (0.64%)1100100002
16.1.1.4secondary metabolism.isoprenoids.non-mevalonate pathway.CMK5 (0.64%)0001211000
20.1stress.biotic5 (0.64%)0000202001
20.2.1stress.abiotic.heat5 (0.64%)0001112000
21.1redox.thioredoxin5 (0.64%)1101000101
26.10misc.cytochrome P4505 (0.64%)0000410000
28.1.1DNA.synthesis/chromatin structure.retrotransposon/transposase5 (0.64%)0000320000
28.2DNA.repair5 (0.64%)0000112001
29.3protein.targeting5 (0.64%)0001022000
29.5.11.3protein.degradation.ubiquitin.E25 (0.64%)1000101200
29.5.11.4.2protein.degradation.ubiquitin.E3.RING5 (0.64%)0001000202
31.1cell.organisation5 (0.64%)0000110003
10.5cell wall.cell wall proteins4 (0.51%)0000030001
17.2.1hormone metabolism.auxin.synthesis-degradation4 (0.51%)0100210000
27.3.24RNA.regulation of transcription.MADS box transcription factor family4 (0.51%)0000020002
27.3.40RNA.regulation of transcription.Aux/IAA family4 (0.51%)0000301000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits3 (0.39%)0001020000
2major CHO metabolism3 (0.39%)0100001001
9mitochondrial electron transport / ATP synthesis3 (0.39%)0000100101
10.5.2cell wall.cell wall proteins.proline rich proteins3 (0.39%)0000020001
10.6cell wall.degradation3 (0.39%)0100011000
11.4lipid metabolism.TAG synthesis3 (0.39%)0001110000
17.1hormone metabolism.abscisic acid3 (0.39%)1000000101
17.1.3hormone metabolism.abscisic acid.induced-regulated-responsive-activated3 (0.39%)1000000101
17.3hormone metabolism.brassinosteroid3 (0.39%)1100010000
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases3 (0.39%)0100011000
27.1RNA.processing3 (0.39%)1000020000
27.3.29RNA.regulation of transcription.TCP transcription factor family3 (0.39%)0100101000
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family3 (0.39%)0000110001
27.3.5RNA.regulation of transcription.ARR3 (0.39%)0001010001
28.99DNA.unspecified3 (0.39%)0000201000
29.3.3protein.targeting.chloroplast3 (0.39%)0001011000
30.2.24signalling.receptor kinases.S-locus glycoprotein like3 (0.39%)0003000000
34.3transport.amino acids3 (0.39%)1000100001
1.1.1.1PS.lightreaction.photosystem II.LHC-II2 (0.26%)0001100000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases2 (0.26%)0000011000
2.2major CHO metabolism.degradation2 (0.26%)0000001001
4glycolysis2 (0.26%)0000020000
4.1glycolysis.cytosolic branch2 (0.26%)0000020000
9.1mitochondrial electron transport / ATP synthesis.NADH-DH2 (0.26%)0000100001
10.7cell wall.modification2 (0.26%)0000002000
11.9lipid metabolism.lipid degradation2 (0.26%)1100000000
14S-assimilation2 (0.26%)0001000100
15.1metal handling.acquisition2 (0.26%)0000010001
16.2secondary metabolism.phenylpropanoids2 (0.26%)2000000000
16.8secondary metabolism.flavonoids2 (0.26%)0100000100
17.3.2hormone metabolism.brassinosteroid.signal transduction2 (0.26%)0100010000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR2 (0.26%)0100010000
17.5.1hormone metabolism.ethylene.synthesis-degradation2 (0.26%)0101000000
2.2.2major CHO metabolism.degradation.starch2 (0.26%)0000001001
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage2 (0.26%)0000001001
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase2 (0.26%)0000001001
20.2.3stress.abiotic.drought/salt2 (0.26%)1000100000
21.4redox.glutaredoxins2 (0.26%)0000110000
26.16misc.myrosinases-lectin-jacalin2 (0.26%)1100000000
26.6misc.O-methyl transferases2 (0.26%)0100001000
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family2 (0.26%)0000200000
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family2 (0.26%)0001010000
27.3.12RNA.regulation of transcription.C3H zinc finger family2 (0.26%)0001000001
27.3.21RNA.regulation of transcription.GRAS transcription factor family2 (0.26%)0000101000
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family2 (0.26%)0100000100
27.3.68RNA.regulation of transcription.PWWP domain protein2 (0.26%)0000001100
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family2 (0.26%)0002000000
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family2 (0.26%)0000010001
29.2protein.synthesis2 (0.26%)0000010001
29.5.11.1protein.degradation.ubiquitin.ubiquitin2 (0.26%)0000020000
29.7protein.glycosylation2 (0.26%)0000001001
33.1development.storage proteins2 (0.26%)0000010001
34.12transport.metal2 (0.26%)0100100000
34.13transport.peptides and oligopeptides2 (0.26%)0000101000
34.99transport.misc2 (0.26%)0200000000
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear2 (0.26%)0000100001
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration1 (0.13%)0000000001
1.3PS.calvin cycle1 (0.13%)0000001000
10.2.1cell wall.cellulose synthesis.cellulose synthase1 (0.13%)0000000001
10.5.3cell wall.cell wall proteins.LRR1 (0.13%)0000010000
10.6.1cell wall.degradation.cellulases and beta -1,4-glucanases1 (0.13%)0100000000
11.8.4lipid metabolism.exotics (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase1 (0.13%)0100000000
11.9.3lipid metabolism.lipid degradation.lysophospholipases1 (0.13%)1000000000
11.9.3.4lipid metabolism.lipid degradation.lysophospholipases.phospholipase A21 (0.13%)1000000000
11.9.4lipid metabolism.lipid degradation.beta-oxidation1 (0.13%)0100000000
11.9.4.9lipid metabolism.lipid degradation.beta-oxidation.multifunctional1 (0.13%)0100000000
12.2.1N-metabolism.ammonia metabolism.glutamate synthase1 (0.13%)0100000000
13.2.3amino acid metabolism.degradation.aspartate family1 (0.13%)0000010000
13.2.3.5amino acid metabolism.degradation.aspartate family.lysine1 (0.13%)0000010000
13.2.3.5.1mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase1 (0.13%)0000010000
16.1.1.7secondary metabolism.isoprenoids.non-mevalonate pathway.HDR1 (0.13%)0000010000
16.1.5secondary metabolism.isoprenoids.terpenoids1 (0.13%)0001000000
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis1 (0.13%)1000000000
16.2.1.7secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR11 (0.13%)1000000000
16.8.2secondary metabolism.flavonoids.chalcones1 (0.13%)0000000100
16.8.3secondary metabolism.flavonoids.dihydroflavonols1 (0.13%)0100000000
16.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase1 (0.13%)0100000000
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase1 (0.13%)0000010000
17.2.2hormone metabolism.auxin.signal transduction1 (0.13%)0000000001
17.3.1hormone metabolism.brassinosteroid.synthesis-degradation1 (0.13%)1000000000
17.3.1.2hormone metabolism.brassinosteroid.synthesis-degradation.sterols1 (0.13%)1000000000
17.3.1.2.8hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF11 (0.13%)1000000000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.13%)0000000001
17.7.1hormone metabolism.jasmonate.synthesis-degradation1 (0.13%)0000000001
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase1 (0.13%)0000000001
18.5.2Co-factor and vitamine metabolism.folate & vitamine K.vitamine K1 (0.13%)0000100000
18.5.2.1Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.isochorismate synthase1 (0.13%)0000100000
2.1major CHO metabolism.synthesis1 (0.13%)0100000000
3minor CHO metabolism1 (0.13%)1000000000
3.1minor CHO metabolism.raffinose family1 (0.13%)1000000000
8TCA / org transformation1 (0.13%)0000000001
8.3TCA / org transformation.carbonic anhydrases1 (0.13%)0000000001
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase1 (0.13%)0000000100
10.2cell wall.cellulose synthesis1 (0.13%)0000000001
11.8lipid metabolism.exotics(steroids, squalene etc)1 (0.13%)0100000000
12N-metabolism1 (0.13%)0100000000
12.2N-metabolism.ammonia metabolism1 (0.13%)0100000000
13amino acid metabolism1 (0.13%)0000010000
13.2amino acid metabolism.degradation1 (0.13%)0000010000
14.2S-assimilation.APR1 (0.13%)0001000000
14.3S-assimilation.sulfite redox1 (0.13%)0000000100
16.10secondary metabolism.simple phenols1 (0.13%)0000010000
17.4hormone metabolism.cytokinin1 (0.13%)0000000001
18Co-factor and vitamine metabolism1 (0.13%)0000100000
18.5Co-factor and vitamine metabolism.folate & vitamine K1 (0.13%)0000100000
19.20tetrapyrrole synthesis.ferrochelatase1 (0.13%)0000000001
2.1.2major CHO metabolism.synthesis.starch1 (0.13%)0100000000
2.1.2.1major CHO metabolism.synthesis.starch.AGPase1 (0.13%)0100000000
19tetrapyrrole synthesis1 (0.13%)0000000001
20.1.7stress.biotic.PR-proteins1 (0.13%)0000100000
26.12misc.peroxidases1 (0.13%)0000010000
26.13misc.acid and other phosphatases1 (0.13%)1000000000
26.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein1 (0.13%)0000001000
26.24misc.GCN5-related N-acetyltransferase1 (0.13%)0001000000
26.28misc.GDSL-motif lipase1 (0.13%)0000100000
26.3misc.gluco-, galacto- and mannosidases1 (0.13%)0100000000
26.3.4misc.gluco-, galacto- and mannosidases.endoglucanase1 (0.13%)0100000000
26.4misc.beta 1,3 glucan hydrolases1 (0.13%)0000001000
26.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase1 (0.13%)0000001000
26.7misc.oxidases - copper, flavone etc1 (0.13%)0000100000
27.1.19RNA.processing.ribonucleases1 (0.13%)0000010000
27.1.2RNA.processing.RNA helicase1 (0.13%)1000000000
27.2RNA.transcription1 (0.13%)0000000100
27.3.13RNA.regulation of transcription.CCAAT box binding factor family, DR11 (0.13%)0000010000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family1 (0.13%)0000000001
27.3.27RNA.regulation of transcription.NAC domain transcription factor family1 (0.13%)0000000100
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family1 (0.13%)0000001000
27.3.49RNA.regulation of transcription.GeBP like1 (0.13%)0000100000
27.3.50RNA.regulation of transcription.General Transcription1 (0.13%)0000000001
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family1 (0.13%)0000100000
29.2.1.2.1.16protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S161 (0.13%)0000001000
29.2.1.2.2.17protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L171 (0.13%)0000001000
29.2.1.2.2.34protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L341 (0.13%)0000100000
29.2.3protein.synthesis.initiation1 (0.13%)0000010000
29.2.5protein.synthesis.release1 (0.13%)0000000001
29.3.1protein.targeting.nucleus1 (0.13%)0000001000
29.3.4protein.targeting.secretory pathway1 (0.13%)0000010000
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.13%)0000010000
29.4.1.59protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX1 (0.13%)1000000000
29.5.1protein.degradation.subtilases1 (0.13%)1000000000
29.5.2protein.degradation.autophagy1 (0.13%)0000100000
29.5.3protein.degradation.cysteine protease1 (0.13%)0000001000
3.1.1minor CHO metabolism.raffinose family.galactinol synthases1 (0.13%)1000000000
3.1.1.2minor CHO metabolism.raffinose family.galactinol synthases.putative1 (0.13%)1000000000
30.2.99signalling.receptor kinases.misc1 (0.13%)0000010000
30.4signalling.phosphinositides1 (0.13%)0000010000
30.4.5signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase1 (0.13%)0000010000
30.6signalling.MAP kinases1 (0.13%)0000000001
31.2cell.division1 (0.13%)0001000000
31.3cell.cycle1 (0.13%)0001000000
34.1transport.p- and v-ATPases1 (0.13%)0000000001
34.14transport.unspecified cations1 (0.13%)0100000000
34.15transport.potassium1 (0.13%)0000000001
34.21transport.calcium1 (0.13%)0000000001
34.22transport.cyclic nucleotide or calcium regulated channels1 (0.13%)0000000001
34.7transport.phosphate1 (0.13%)0000000001
4.1.15glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)1 (0.13%)0000010000
4.1.8glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)1 (0.13%)0000010000