Gene Ontology terms associated with a binding site

Binding site
Motif_237
Name
O2F1BE2S1
Description
opaque-2 recognition site F1 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F1 is hybrid C/G box
#Associated genes
18
#Associated GO terms
303
 
Biological Process
Molecular Function
Cellular Component






Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process10 (55.56%)0022300201
GO:0009987cellular process9 (50.00%)0012200211
GO:0071704organic substance metabolic process9 (50.00%)0022300101
GO:0044238primary metabolic process9 (50.00%)0022300101
GO:0044237cellular metabolic process8 (44.44%)0012200201
GO:0044699single-organism process7 (38.89%)0021300001
GO:0044260cellular macromolecule metabolic process6 (33.33%)0002200101
GO:0032502developmental process6 (33.33%)0011300001
GO:0043170macromolecule metabolic process6 (33.33%)0002200101
GO:0007275multicellular organismal development6 (33.33%)0011300001
GO:0032501multicellular organismal process6 (33.33%)0011300001
GO:0009791post-embryonic development6 (33.33%)0011300001
GO:0050896response to stimulus6 (33.33%)0001200111
GO:0044707single-multicellular organism process6 (33.33%)0011300001
GO:0044767single-organism developmental process6 (33.33%)0011300001
GO:0048856anatomical structure development5 (27.78%)0011300000
GO:0065007biological regulation5 (27.78%)0001200110
GO:0044267cellular protein metabolic process5 (27.78%)0002200001
GO:0019538protein metabolic process5 (27.78%)0002200001
GO:0050789regulation of biological process5 (27.78%)0001200110
GO:0006950response to stress5 (27.78%)0001200110
GO:0048731system development5 (27.78%)0011300000
GO:0009640photomorphogenesis4 (22.22%)0001200001
GO:0009628response to abiotic stimulus4 (22.22%)0001200001
GO:0009416response to light stimulus4 (22.22%)0001200001
GO:0009314response to radiation4 (22.22%)0001200001
GO:0009639response to red or far red light4 (22.22%)0001200001
GO:0044763single-organism cellular process4 (22.22%)0011200000
GO:0048532anatomical structure arrangement3 (16.67%)0001200000
GO:0009653anatomical structure morphogenesis3 (16.67%)0001200000
GO:0051641cellular localization3 (16.67%)0001200000
GO:0070727cellular macromolecule localization3 (16.67%)0001200000
GO:0034613cellular protein localization3 (16.67%)0001200000
GO:0016482cytoplasmic transport3 (16.67%)0001200000
GO:0009704de-etiolation3 (16.67%)0001200000
GO:0048589developmental growth3 (16.67%)0001200000
GO:0051234establishment of localization3 (16.67%)0001200000
GO:0051649establishment of localization in cell3 (16.67%)0001200000
GO:0045184establishment of protein localization3 (16.67%)0001200000
GO:0072596establishment of protein localization to chloroplast3 (16.67%)0001200000
GO:0072594establishment of protein localization to organelle3 (16.67%)0001200000
GO:0040007growth3 (16.67%)0001200000
GO:0044743intracellular protein transmembrane import3 (16.67%)0001200000
GO:0065002intracellular protein transmembrane transport3 (16.67%)0001200000
GO:0006886intracellular protein transport3 (16.67%)0001200000
GO:0046907intracellular transport3 (16.67%)0001200000
GO:0051179localization3 (16.67%)0001200000
GO:0033036macromolecule localization3 (16.67%)0001200000
GO:0048507meristem development3 (16.67%)0001200000
GO:0035266meristem growth3 (16.67%)0001200000
GO:0010073meristem maintenance3 (16.67%)0001200000
GO:0009933meristem structural organization3 (16.67%)0001200000
GO:0048513organ development3 (16.67%)0001200000
GO:0071702organic substance transport3 (16.67%)0001200000
GO:0006796phosphate-containing compound metabolic process3 (16.67%)0011000001
GO:0006793phosphorus metabolic process3 (16.67%)0011000001
GO:0006457protein folding3 (16.67%)0001200000
GO:0017038protein import3 (16.67%)0001200000
GO:0045037protein import into chloroplast stroma3 (16.67%)0001200000
GO:0008104protein localization3 (16.67%)0001200000
GO:0072598protein localization to chloroplast3 (16.67%)0001200000
GO:0033365protein localization to organelle3 (16.67%)0001200000
GO:0009306protein secretion3 (16.67%)0001200000
GO:0006605protein targeting3 (16.67%)0001200000
GO:0045036protein targeting to chloroplast3 (16.67%)0001200000
GO:0071806protein transmembrane transport3 (16.67%)0001200000
GO:0015031protein transport3 (16.67%)0001200000
GO:0022603regulation of anatomical structure morphogenesis3 (16.67%)0001200000
GO:0048638regulation of developmental growth3 (16.67%)0001200000
GO:0050793regulation of developmental process3 (16.67%)0001200000
GO:0040008regulation of growth3 (16.67%)0001200000
GO:0048509regulation of meristem development3 (16.67%)0001200000
GO:0010075regulation of meristem growth3 (16.67%)0001200000
GO:0009934regulation of meristem structural organization3 (16.67%)0001200000
GO:2000026regulation of multicellular organismal development3 (16.67%)0001200000
GO:0051239regulation of multicellular organismal process3 (16.67%)0001200000
GO:0046686response to cadmium ion3 (16.67%)0001200000
GO:0042221response to chemical3 (16.67%)0001200000
GO:0010157response to chlorate3 (16.67%)0001200000
GO:0009409response to cold3 (16.67%)0001200000
GO:0009408response to heat3 (16.67%)0001200000
GO:0010035response to inorganic substance3 (16.67%)0001200000
GO:0010038response to metal ion3 (16.67%)0001200000
GO:0006970response to osmotic stress3 (16.67%)0001200000
GO:1901700response to oxygen-containing compound3 (16.67%)0001200000
GO:0009651response to salt stress3 (16.67%)0001200000
GO:0009266response to temperature stimulus3 (16.67%)0001200000
GO:0009415response to water3 (16.67%)0001200000
GO:0009414response to water deprivation3 (16.67%)0001200000
GO:0046903secretion3 (16.67%)0001200000
GO:0032940secretion by cell3 (16.67%)0001200000
GO:0044765single-organism transport3 (16.67%)0001200000
GO:0009888tissue development3 (16.67%)0001200000
GO:0055085transmembrane transport3 (16.67%)0001200000
GO:0006810transport3 (16.67%)0001200000
GO:0019438aromatic compound biosynthetic process2 (11.11%)0010000100
GO:0009058biosynthetic process2 (11.11%)0010000100
GO:0005975carbohydrate metabolic process2 (11.11%)0010100000
GO:0006725cellular aromatic compound metabolic process2 (11.11%)0010000100
GO:0044249cellular biosynthetic process2 (11.11%)0010000100
GO:0044271cellular nitrogen compound biosynthetic process2 (11.11%)0010000100
GO:0034641cellular nitrogen compound metabolic process2 (11.11%)0010000100
GO:0006464cellular protein modification process2 (11.11%)0001000001
GO:0006952defense response2 (11.11%)0000000110
GO:0042742defense response to bacterium2 (11.11%)0000000110
GO:0098542defense response to other organism2 (11.11%)0000000110
GO:0003006developmental process involved in reproduction2 (11.11%)0010100000
GO:0010154fruit development2 (11.11%)0010100000
GO:0018130heterocycle biosynthetic process2 (11.11%)0010000100
GO:0046483heterocycle metabolic process2 (11.11%)0010000100
GO:0043412macromolecule modification2 (11.11%)0001000001
GO:0051704multi-organism process2 (11.11%)0000000110
GO:0048519negative regulation of biological process2 (11.11%)0000000110
GO:0031348negative regulation of defense response2 (11.11%)0000000110
GO:0048585negative regulation of response to stimulus2 (11.11%)0000000110
GO:0006807nitrogen compound metabolic process2 (11.11%)0010000100
GO:1901362organic cyclic compound biosynthetic process2 (11.11%)0010000100
GO:1901360organic cyclic compound metabolic process2 (11.11%)0010000100
GO:1901576organic substance biosynthetic process2 (11.11%)0010000100
GO:0016310phosphorylation2 (11.11%)0001000001
GO:0036211protein modification process2 (11.11%)0001000001
GO:0006468protein phosphorylation2 (11.11%)0001000001
GO:0031347regulation of defense response2 (11.11%)0000000110
GO:0048583regulation of response to stimulus2 (11.11%)0000000110
GO:0080134regulation of response to stress2 (11.11%)0000000110
GO:0000003reproduction2 (11.11%)0010100000
GO:0022414reproductive process2 (11.11%)0010100000
GO:0048608reproductive structure development2 (11.11%)0010100000
GO:0061458reproductive system development2 (11.11%)0010100000
GO:0009617response to bacterium2 (11.11%)0000000110
GO:0009607response to biotic stimulus2 (11.11%)0000000110
GO:0051707response to other organism2 (11.11%)0000000110
GO:0010214seed coat development2 (11.11%)0010100000
GO:0048316seed development2 (11.11%)0010100000
GO:0044702single organism reproductive process2 (11.11%)0010100000
GO:0032774RNA biosynthetic process1 (5.56%)0000000100
GO:0016070RNA metabolic process1 (5.56%)0000000100
GO:1901135carbohydrate derivative metabolic process1 (5.56%)0010000000
GO:0019752carboxylic acid metabolic process1 (5.56%)0010000000
GO:0006081cellular aldehyde metabolic process1 (5.56%)0010000000
GO:0044255cellular lipid metabolic process1 (5.56%)0010000000
GO:0034645cellular macromolecule biosynthetic process1 (5.56%)0000000100
GO:0015995chlorophyll biosynthetic process1 (5.56%)0010000000
GO:0015994chlorophyll metabolic process1 (5.56%)0010000000
GO:0051188cofactor biosynthetic process1 (5.56%)0010000000
GO:0051186cofactor metabolic process1 (5.56%)0010000000
GO:0010467gene expression1 (5.56%)0000000100
GO:0019682glyceraldehyde-3-phosphate metabolic process1 (5.56%)0010000000
GO:0009240isopentenyl diphosphate biosynthetic process1 (5.56%)0010000000
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1 (5.56%)0010000000
GO:0046490isopentenyl diphosphate metabolic process1 (5.56%)0010000000
GO:0008299isoprenoid biosynthetic process1 (5.56%)0010000000
GO:0006720isoprenoid metabolic process1 (5.56%)0010000000
GO:0008610lipid biosynthetic process1 (5.56%)0010000000
GO:0006629lipid metabolic process1 (5.56%)0010000000
GO:0009059macromolecule biosynthetic process1 (5.56%)0000000100
GO:0032787monocarboxylic acid metabolic process1 (5.56%)0010000000
GO:0090304nucleic acid metabolic process1 (5.56%)0000000100
GO:0034654nucleobase-containing compound biosynthetic process1 (5.56%)0000000100
GO:0006139nucleobase-containing compound metabolic process1 (5.56%)0000000100
GO:0006082organic acid metabolic process1 (5.56%)0010000000
GO:1901566organonitrogen compound biosynthetic process1 (5.56%)0010000000
GO:1901564organonitrogen compound metabolic process1 (5.56%)0010000000
GO:0090407organophosphate biosynthetic process1 (5.56%)0010000000
GO:0019637organophosphate metabolic process1 (5.56%)0010000000
GO:0043436oxoacid metabolic process1 (5.56%)0010000000
GO:0008654phospholipid biosynthetic process1 (5.56%)0010000000
GO:0006644phospholipid metabolic process1 (5.56%)0010000000
GO:0015979photosynthesis1 (5.56%)0000000100
GO:0046148pigment biosynthetic process1 (5.56%)0010000000
GO:0042440pigment metabolic process1 (5.56%)0010000000
GO:0006779porphyrin-containing compound biosynthetic process1 (5.56%)0010000000
GO:0006778porphyrin-containing compound metabolic process1 (5.56%)0010000000
GO:0006090pyruvate metabolic process1 (5.56%)0010000000
GO:2001141regulation of RNA biosynthetic process1 (5.56%)0000000100
GO:0051252regulation of RNA metabolic process1 (5.56%)0000000100
GO:0009889regulation of biosynthetic process1 (5.56%)0000000100
GO:0031326regulation of cellular biosynthetic process1 (5.56%)0000000100
GO:2000112regulation of cellular macromolecule biosynthetic process1 (5.56%)0000000100
GO:0031323regulation of cellular metabolic process1 (5.56%)0000000100
GO:0050794regulation of cellular process1 (5.56%)0000000100
GO:0010468regulation of gene expression1 (5.56%)0000000100
GO:0010556regulation of macromolecule biosynthetic process1 (5.56%)0000000100
GO:0060255regulation of macromolecule metabolic process1 (5.56%)0000000100
GO:0019222regulation of metabolic process1 (5.56%)0000000100
GO:0051171regulation of nitrogen compound metabolic process1 (5.56%)0000000100
GO:0019219regulation of nucleobase-containing compound metabolic process1 (5.56%)0000000100
GO:0080090regulation of primary metabolic process1 (5.56%)0000000100
GO:0006355regulation of transcription, DNA-dependent1 (5.56%)0000000100
GO:0044711single-organism biosynthetic process1 (5.56%)0010000000
GO:0044710single-organism metabolic process1 (5.56%)0010000000
GO:0044281small molecule metabolic process1 (5.56%)0010000000
GO:0016114terpenoid biosynthetic process1 (5.56%)0010000000
GO:0006721terpenoid metabolic process1 (5.56%)0010000000
GO:0033014tetrapyrrole biosynthetic process1 (5.56%)0010000000
GO:0033013tetrapyrrole metabolic process1 (5.56%)0010000000
GO:0006351transcription, DNA-templated1 (5.56%)0000000100

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding10 (55.56%)0002300212
GO:0043167ion binding10 (55.56%)0002300212
GO:1901363heterocyclic compound binding8 (44.44%)0002200112
GO:0097159organic cyclic compound binding8 (44.44%)0002200112
GO:0043168anion binding7 (38.89%)0002200111
GO:1901265nucleoside phosphate binding7 (38.89%)0002200111
GO:0000166nucleotide binding7 (38.89%)0002200111
GO:0036094small molecule binding7 (38.89%)0002200111
GO:0003824catalytic activity6 (33.33%)0021101001
GO:0005524ATP binding5 (27.78%)0002200001
GO:0030554adenyl nucleotide binding5 (27.78%)0002200001
GO:0032559adenyl ribonucleotide binding5 (27.78%)0002200001
GO:0097367carbohydrate derivative binding5 (27.78%)0002200001
GO:0001882nucleoside binding5 (27.78%)0002200001
GO:0001883purine nucleoside binding5 (27.78%)0002200001
GO:0017076purine nucleotide binding5 (27.78%)0002200001
GO:0032550purine ribonucleoside binding5 (27.78%)0002200001
GO:0035639purine ribonucleoside triphosphate binding5 (27.78%)0002200001
GO:0032555purine ribonucleotide binding5 (27.78%)0002200001
GO:0032549ribonucleoside binding5 (27.78%)0002200001
GO:0032553ribonucleotide binding5 (27.78%)0002200001
GO:0005515protein binding4 (22.22%)0001200001
GO:0043169cation binding3 (16.67%)0000100101
GO:0016787hydrolase activity3 (16.67%)0010101000
GO:0046872metal ion binding3 (16.67%)0000100101
GO:0016740transferase activity3 (16.67%)0011000001
GO:0051082unfolded protein binding3 (16.67%)0001200000
GO:0051287NAD binding2 (11.11%)0000000110
GO:0070403NAD+ binding2 (11.11%)0000000110
GO:0046556alpha-N-arabinofuranosidase activity2 (11.11%)0010100000
GO:0050662coenzyme binding2 (11.11%)0000000110
GO:0048037cofactor binding2 (11.11%)0000000110
GO:0016798hydrolase activity, acting on glycosyl bonds2 (11.11%)0010100000
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds2 (11.11%)0010100000
GO:0016301kinase activity2 (11.11%)0001000001
GO:0016773phosphotransferase activity, alcohol group as acceptor2 (11.11%)0001000001
GO:0004672protein kinase activity2 (11.11%)0001000001
GO:0004674protein serine/threonine kinase activity2 (11.11%)0001000001
GO:0016772transferase activity, transferring phosphorus-containing groups2 (11.11%)0001000001
GO:00086611-deoxy-D-xylulose-5-phosphate synthase activity1 (5.56%)0010000000
GO:0003677DNA binding1 (5.56%)0000000001
GO:0016597amino acid binding1 (5.56%)0000000001
GO:0005509calcium ion binding1 (5.56%)0000000100
GO:0031406carboxylic acid binding1 (5.56%)0000000001
GO:0016788hydrolase activity, acting on ester bonds1 (5.56%)0000001000
GO:0003676nucleic acid binding1 (5.56%)0000000001
GO:0001071nucleic acid binding transcription factor activity1 (5.56%)0000000100
GO:0043177organic acid binding1 (5.56%)0000000001
GO:0003700sequence-specific DNA binding transcription factor activity1 (5.56%)0000000100
GO:0016744transferase activity, transferring aldehyde or ketonic groups1 (5.56%)0010000000
GO:0046914transition metal ion binding1 (5.56%)0000000001
GO:0008270zinc ion binding1 (5.56%)0000000001

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell10 (55.56%)0021300211
GO:0044464cell part10 (55.56%)0021300211
GO:0005622intracellular8 (44.44%)0011200211
GO:0043231intracellular membrane-bounded organelle8 (44.44%)0011200211
GO:0043229intracellular organelle8 (44.44%)0011200211
GO:0044424intracellular part8 (44.44%)0011200211
GO:0043227membrane-bounded organelle8 (44.44%)0011200211
GO:0043226organelle8 (44.44%)0011200211
GO:0005634nucleus6 (33.33%)0001200111
GO:0048046apoplast5 (27.78%)0011300000
GO:0071944cell periphery5 (27.78%)0011300000
GO:0005618cell wall5 (27.78%)0011300000
GO:0009507chloroplast5 (27.78%)0011200100
GO:0005737cytoplasm5 (27.78%)0011200100
GO:0044444cytoplasmic part5 (27.78%)0011200100
GO:0030312external encapsulating structure5 (27.78%)0011300000
GO:0005576extracellular region5 (27.78%)0011300000
GO:0009536plastid5 (27.78%)0011200100
GO:0016020membrane4 (22.22%)0001200100
GO:0030054cell junction3 (16.67%)0001200000
GO:0005911cell-cell junction3 (16.67%)0001200000
GO:0009941chloroplast envelope3 (16.67%)0001200000
GO:0044434chloroplast part3 (16.67%)0001200000
GO:0009570chloroplast stroma3 (16.67%)0001200000
GO:0005783endoplasmic reticulum3 (16.67%)0001200000
GO:0031975envelope3 (16.67%)0001200000
GO:0044446intracellular organelle part3 (16.67%)0001200000
GO:0005739mitochondrion3 (16.67%)0001200000
GO:0031967organelle envelope3 (16.67%)0001200000
GO:0031090organelle membrane3 (16.67%)0001200000
GO:0044422organelle part3 (16.67%)0001200000
GO:0005886plasma membrane3 (16.67%)0001200000
GO:0009506plasmodesma3 (16.67%)0001200000
GO:0009526plastid envelope3 (16.67%)0001200000
GO:0044435plastid part3 (16.67%)0001200000
GO:0009532plastid stroma3 (16.67%)0001200000
GO:0055044symplast3 (16.67%)0001200000
GO:0005774vacuolar membrane3 (16.67%)0001200000
GO:0044437vacuolar part3 (16.67%)0001200000
GO:0005773vacuole3 (16.67%)0001200000
GO:0009505plant-type cell wall2 (11.11%)0010100000
GO:1902494catalytic complex1 (5.56%)0000000100
GO:0019898extrinsic to membrane1 (5.56%)0000000100
GO:0032991macromolecular complex1 (5.56%)0000000100
GO:0044425membrane part1 (5.56%)0000000100
GO:1990204oxidoreductase complex1 (5.56%)0000000100
GO:0034357photosynthetic membrane1 (5.56%)0000000100
GO:0009521photosystem1 (5.56%)0000000100
GO:0009523photosystem II1 (5.56%)0000000100
GO:0009654photosystem II oxygen evolving complex1 (5.56%)0000000100
GO:0043234protein complex1 (5.56%)0000000100
GO:0009579thylakoid1 (5.56%)0000000100
GO:0042651thylakoid membrane1 (5.56%)0000000100
GO:0044436thylakoid part1 (5.56%)0000000100