PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_178
Name: MRNA3ENDTAH3
Description: Cis element in 3' end region of wheat histone H3 mRNA; 3' end formation; Also found in histone genes of other plants, yeast

#Associated genes: 101
#Associated MapMan terms: 77

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	21 (20.79%)	0	0	1	7	9	2	1	1
27.3	RNA.regulation of transcription	17 (16.83%)	0	0	1	7	6	1	1	1
29	protein	8 (7.92%)	0	0	1	0	1	1	0	5
29.4	protein.postranslational modification	7 (6.93%)	0	0	1	0	1	1	0	4
1	PS	4 (3.96%)	0	1	0	0	3	0	0	0
1.1	PS.lightreaction	4 (3.96%)	0	1	0	0	3	0	0	0
26	misc	4 (3.96%)	0	0	2	1	0	1	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	4 (3.96%)	0	0	0	2	1	0	0	1
29.4.1	protein.postranslational modification.kinase	4 (3.96%)	0	0	0	0	1	1	0	2
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	4 (3.96%)	0	0	0	0	1	1	0	2
30	signalling	3 (2.97%)	0	0	0	0	1	0	1	1
31	cell	3 (2.97%)	0	0	0	0	1	0	2	0
34	transport	3 (2.97%)	0	0	0	1	0	2	0	0
1.1.1	PS.lightreaction.photosystem II	2 (1.98%)	0	0	0	0	2	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	2 (1.98%)	0	0	0	0	2	0	0	0
10	cell wall	2 (1.98%)	2	0	0	0	0	0	0	0
17	hormone metabolism	2 (1.98%)	0	0	1	0	1	0	0	0
20	stress	2 (1.98%)	1	0	0	1	0	0	0	0
20.1	stress.biotic	2 (1.98%)	1	0	0	1	0	0	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	2 (1.98%)	0	0	2	0	0	0	0	0
27.1	RNA.processing	2 (1.98%)	0	0	0	0	1	1	0	0
27.1.1	RNA.processing.splicing	2 (1.98%)	0	0	0	0	1	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (1.98%)	0	0	0	0	1	1	0	0
27.4	RNA.RNA binding	2 (1.98%)	0	0	0	0	2	0	0	0
29.2.1.1.1.2.24	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24	2 (1.98%)	0	0	0	0	0	1	0	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.98%)	0	0	0	0	2	0	0	0
30.5	signalling.G-proteins	2 (1.98%)	0	0	0	0	1	0	1	0
31.1	cell.organisation	2 (1.98%)	0	0	0	0	0	0	2	0
33	development	2 (1.98%)	0	0	0	0	2	0	0	0
33.99	development.unspecified	2 (1.98%)	0	0	0	0	2	0	0	0
1.1.4	PS.lightreaction.ATP synthase	1 (0.99%)	0	1	0	0	0	0	0	0
1.1.4.7	PS.lightreaction.ATP synthase.delta chain	1 (0.99%)	0	1	0	0	0	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.99%)	0	0	0	0	1	0	0	0
2	major CHO metabolism	1 (0.99%)	0	0	0	1	0	0	0	0
10.6	cell wall.degradation	1 (0.99%)	1	0	0	0	0	0	0	0
10.6.2	cell wall.degradation.mannan-xylose-arabinose-fucose	1 (0.99%)	1	0	0	0	0	0	0	0
10.7	cell wall.modification	1 (0.99%)	1	0	0	0	0	0	0	0
11	lipid metabolism	1 (0.99%)	1	0	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.99%)	1	0	0	0	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.99%)	1	0	0	0	0	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.99%)	1	0	0	0	0	0	0	0
12	N-metabolism	1 (0.99%)	0	0	0	0	0	0	1	0
12.4	N-metabolism.misc	1 (0.99%)	0	0	0	0	0	0	1	0
16	secondary metabolism	1 (0.99%)	0	0	0	1	0	0	0	0
16.7	secondary metabolism.wax	1 (0.99%)	0	0	0	1	0	0	0	0
17.1	hormone metabolism.abscisic acid	1 (0.99%)	0	0	0	0	1	0	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	1 (0.99%)	0	0	0	0	1	0	0	0
17.5	hormone metabolism.ethylene	1 (0.99%)	0	0	1	0	0	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (0.99%)	0	0	1	0	0	0	0	0
2.2	major CHO metabolism.degradation	1 (0.99%)	0	0	0	1	0	0	0	0
2.2.1	major CHO metabolism.degradation.sucrose	1 (0.99%)	0	0	0	1	0	0	0	0
2.2.1.99	major CHO metabolism.degradation.sucrose.misc	1 (0.99%)	0	0	0	1	0	0	0	0
22	polyamine metabolism	1 (0.99%)	0	0	0	0	0	0	0	1
22.1	polyamine metabolism.synthesis	1 (0.99%)	0	0	0	0	0	0	0	1
22.1.3	polyamine metabolism.synthesis.arginine decarboxylase	1 (0.99%)	0	0	0	0	0	0	0	1
26.4	misc.beta 1,3 glucan hydrolases	1 (0.99%)	0	0	0	0	0	1	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.99%)	0	0	0	1	0	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.99%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.99%)	0	0	0	0	1	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.99%)	0	0	0	1	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.99%)	0	0	0	0	0	0	1	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.99%)	0	0	0	1	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.99%)	0	0	0	0	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.99%)	0	0	1	0	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	1 (0.99%)	0	0	0	0	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.99%)	0	0	0	1	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.99%)	0	0	0	1	0	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	1 (0.99%)	0	0	0	0	1	0	0	0
29.5	protein.degradation	1 (0.99%)	0	0	0	0	0	0	0	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.99%)	0	0	0	1	0	0	0	0
29.5.5	protein.degradation.serine protease	1 (0.99%)	0	0	0	0	0	0	0	1
30.3	signalling.calcium	1 (0.99%)	0	0	0	0	0	0	0	1
31.2	cell.division	1 (0.99%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.99%)	0	0	0	1	0	0	0	0
34.15	transport.potassium	1 (0.99%)	0	0	0	0	0	1	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.99%)	0	0	0	0	0	1	0	0
34.19.3	transport.Major Intrinsic Proteins.NIP	1 (0.99%)	0	0	0	0	0	1	0	0