PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_167
Name: SBP-box promoter motif
Description: Molecular characterisation of the Arabidopsis SBP-box genes

#Associated genes: 260
#Associated MapMan terms: 116

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	86 (33.08%)	10	8	7	15	25	10	1	10
27.3	RNA.regulation of transcription	77 (29.62%)	10	8	5	15	18	10	1	10
17	hormone metabolism	19 (7.31%)	2	3	1	6	2	3	0	2
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	14 (5.38%)	1	1	1	1	4	3	0	3
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	12 (4.62%)	1	4	1	1	1	1	1	2
26	misc	11 (4.23%)	3	0	1	0	3	1	1	2
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	9 (3.46%)	1	1	0	4	1	2	0	0
17.2	hormone metabolism.auxin	8 (3.08%)	1	1	1	2	1	1	0	1
29	protein	8 (3.08%)	0	0	3	0	1	1	1	2
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	7 (2.69%)	1	1	1	2	1	1	0	0
27.1	RNA.processing	7 (2.69%)	0	0	2	0	5	0	0	0
30	signalling	7 (2.69%)	0	0	1	1	2	1	0	2
31	cell	7 (2.69%)	1	0	0	0	4	1	0	1
33	development	7 (2.69%)	1	0	0	4	1	0	0	1
33.99	development.unspecified	7 (2.69%)	1	0	0	4	1	0	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	6 (2.31%)	0	1	1	2	2	0	0	0
21	redox	5 (1.92%)	0	3	1	0	0	0	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	5 (1.92%)	1	1	0	1	2	0	0	0
17.1	hormone metabolism.abscisic acid	4 (1.54%)	1	1	0	1	1	0	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	4 (1.54%)	1	1	0	1	1	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	4 (1.54%)	0	0	0	1	1	1	0	1
27.3.99	RNA.regulation of transcription.unclassified	4 (1.54%)	2	0	0	1	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	4 (1.54%)	0	0	0	0	1	1	0	2
30.2	signalling.receptor kinases	4 (1.54%)	0	0	1	1	1	1	0	0
34	transport	4 (1.54%)	1	1	1	0	1	0	0	0
10	cell wall	3 (1.15%)	1	0	1	0	1	0	0	0
11	lipid metabolism	3 (1.15%)	1	0	1	0	0	1	0	0
11.9	lipid metabolism.lipid degradation	3 (1.15%)	1	0	1	0	0	1	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	3 (1.15%)	1	0	1	0	0	1	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	3 (1.15%)	1	0	1	0	0	1	0	0
17.5	hormone metabolism.ethylene	3 (1.15%)	0	0	0	2	0	1	0	0
17.8	hormone metabolism.salicylic acid	3 (1.15%)	0	1	0	1	0	0	0	1
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	3 (1.15%)	0	1	0	1	0	0	0	1
21.4	redox.glutaredoxins	3 (1.15%)	0	1	1	0	0	0	1	0
22	polyamine metabolism	3 (1.15%)	0	0	0	2	1	0	0	0
22.1	polyamine metabolism.synthesis	3 (1.15%)	0	0	0	2	1	0	0	0
22.1.2	polyamine metabolism.synthesis.SAM decarboxylase	3 (1.15%)	0	0	0	2	1	0	0	0
26.18	misc.invertase/pectin methylesterase inhibitor family protein	3 (1.15%)	2	0	0	0	1	0	0	0
27.1.1	RNA.processing.splicing	3 (1.15%)	0	0	1	0	2	0	0	0
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	3 (1.15%)	0	0	1	1	1	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	3 (1.15%)	1	0	0	1	1	0	0	0
28	DNA	3 (1.15%)	0	0	0	1	2	0	0	0
29.5	protein.degradation	3 (1.15%)	0	0	1	0	0	0	1	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (1.15%)	0	0	0	0	1	1	1	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	3 (1.15%)	0	0	0	1	1	1	0	0
31.5	cell.cell death	3 (1.15%)	0	0	0	0	2	0	0	1
31.5.1	cell.cell death.plants	3 (1.15%)	0	0	0	0	2	0	0	1
10.7	cell wall.modification	2 (0.77%)	1	0	1	0	0	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	2 (0.77%)	0	0	0	2	0	0	0	0
20	stress	2 (0.77%)	0	0	2	0	0	0	0	0
20.1	stress.biotic	2 (0.77%)	0	0	2	0	0	0	0	0
20.1.7	stress.biotic.PR-proteins	2 (0.77%)	0	0	2	0	0	0	0	0
21.2	redox.ascorbate and glutathione	2 (0.77%)	0	2	0	0	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	2 (0.77%)	0	2	0	0	0	0	0	0
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	2 (0.77%)	0	2	0	0	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	2 (0.77%)	0	0	0	0	0	0	1	1
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	2 (0.77%)	0	0	0	0	0	0	1	1
26.7	misc.oxidases - copper, flavone etc	2 (0.77%)	0	0	0	0	1	1	0	0
27.1.2	RNA.processing.RNA helicase	2 (0.77%)	0	0	0	0	2	0	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.77%)	0	0	0	0	1	1	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	2 (0.77%)	0	0	0	0	1	1	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	2 (0.77%)	1	0	0	1	0	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	2 (0.77%)	0	0	0	2	0	0	0	0
27.4	RNA.RNA binding	2 (0.77%)	0	0	0	0	2	0	0	0
28.1	DNA.synthesis/chromatin structure	2 (0.77%)	0	0	0	0	2	0	0	0
29.1	protein.aa activation	2 (0.77%)	0	0	0	0	1	0	0	1
29.4	protein.postranslational modification	2 (0.77%)	0	0	2	0	0	0	0	0
29.4.1	protein.postranslational modification.kinase	2 (0.77%)	0	0	2	0	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (0.77%)	0	0	2	0	0	0	0	0
31.2	cell.division	2 (0.77%)	0	0	0	0	1	1	0	0
34.13	transport.peptides and oligopeptides	2 (0.77%)	1	0	1	0	0	0	0	0
1	PS	1 (0.38%)	0	0	0	0	0	0	1	0
1.1	PS.lightreaction	1 (0.38%)	0	0	0	0	0	0	1	0
1.1.2	PS.lightreaction.photosystem I	1 (0.38%)	0	0	0	0	0	0	1	0
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	1 (0.38%)	0	0	0	0	0	0	1	0
3	minor CHO metabolism	1 (0.38%)	0	0	0	0	0	1	0	0
3.2	minor CHO metabolism.trehalose	1 (0.38%)	0	0	0	0	0	1	0	0
10.5	cell wall.cell wall proteins	1 (0.38%)	0	0	0	0	1	0	0	0
10.5.5	cell wall.cell wall proteins.RGP	1 (0.38%)	0	0	0	0	1	0	0	0
13	amino acid metabolism	1 (0.38%)	0	0	0	0	1	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.38%)	0	0	0	0	1	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.38%)	0	0	0	0	1	0	0	0
13.1.6.5	amino acid metabolism.synthesis.aromatic aa.tryptophan	1 (0.38%)	0	0	0	0	1	0	0	0
13.1.6.5.5	amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase	1 (0.38%)	0	0	0	0	1	0	0	0
15	metal handling	1 (0.38%)	0	0	0	0	1	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.38%)	0	0	0	0	0	0	0	1
17.4	hormone metabolism.cytokinin	1 (0.38%)	0	0	0	0	0	1	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.38%)	0	0	0	0	0	1	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.38%)	0	0	0	0	0	1	0	0
26.10	misc.cytochrome P450	1 (0.38%)	0	0	0	0	0	0	0	1
26.12	misc.peroxidases	1 (0.38%)	0	0	1	0	0	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.38%)	1	0	0	0	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.38%)	0	0	0	0	1	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.38%)	0	0	1	0	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.38%)	0	0	0	0	0	0	0	1
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.38%)	1	0	0	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.38%)	1	0	0	0	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.38%)	0	0	0	0	0	0	0	1
27.3.41	RNA.regulation of transcription.B3 transcription factor family	1 (0.38%)	0	0	0	0	0	1	0	0
27.3.5	RNA.regulation of transcription.ARR	1 (0.38%)	0	0	0	0	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.38%)	0	0	0	0	0	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.38%)	0	0	1	0	0	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.38%)	0	0	0	0	0	0	0	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.38%)	0	0	0	0	1	0	0	0
28.99	DNA.unspecified	1 (0.38%)	0	0	0	1	0	0	0	0
29.5.11.4.4	protein.degradation.ubiquitin.E3.APC	1 (0.38%)	0	0	0	1	0	0	0	0
29.6	protein.folding	1 (0.38%)	0	0	0	0	0	1	0	0
3.2.2	minor CHO metabolism.trehalose.TPP	1 (0.38%)	0	0	0	0	0	1	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.38%)	0	0	0	0	0	0	0	1
30.2.25	signalling.receptor kinases.wall associated kinase	1 (0.38%)	0	0	1	0	0	0	0	0
30.3	signalling.calcium	1 (0.38%)	0	0	0	0	1	0	0	0
30.6	signalling.MAP kinases	1 (0.38%)	0	0	0	0	0	0	0	1
31.1	cell.organisation	1 (0.38%)	1	0	0	0	0	0	0	0
31.4	cell.vesicle transport	1 (0.38%)	0	0	0	0	1	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.38%)	0	0	0	0	1	0	0	0
34.99	transport.misc	1 (0.38%)	0	1	0	0	0	0	0	0