InterPro domains associated with a binding site

Binding site
Motif_167
Name
SBP-box promoter motif
Description
Molecular characterisation of the Arabidopsis SBP-box genes
#Associated genes
260
#Associated InterPro terms
256

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR009057Homeodomain-like32 (12.31%)4602853112
IPR001005SANT/Myb domain17 (6.54%)2101742000
IPR002100Transcription factor, MADS-box16 (6.15%)1111143013
IPR001356Homeobox domain13 (5.00%)1401111112
IPR015300DNA-binding pseudobarrel domain11 (4.23%)2200231010
IPR027417P-loop containing nucleoside triphosphate hydrolase11 (4.23%)2012131010
IPR002487Transcription factor, K-box11 (4.23%)1100141012
IPR003340B3 DNA binding domain10 (3.85%)2200231000
IPR017970Homeobox, conserved site9 (3.46%)1301101002
IPR003676Auxin-induced protein, ARG78 (3.08%)1111211000
IPR000047Helix-turn-helix motif8 (3.08%)1301101001
IPR017930Myb domain8 (3.08%)0001331000
IPR003441NAC domain7 (2.69%)1010310001
IPR013083Zinc finger, RING/FYVE/PHD-type7 (2.69%)0010012111
IPR016024Armadillo-type fold6 (2.31%)0010020111
IPR006447Myb domain, plants6 (2.31%)0101220000
IPR017884SANT domain6 (2.31%)0000411000
IPR003311AUX/IAA protein5 (1.92%)1100120000
IPR011989Armadillo-like helical5 (1.92%)0010010111
IPR011525Aux/IAA-ARF-dimerisation5 (1.92%)1100120000
IPR010525Auxin response factor5 (1.92%)1100120000
IPR001650Helicase, C-terminal5 (1.92%)1010120000
IPR014001Helicase, superfamily 1/2, ATP-binding domain5 (1.92%)1010120000
IPR003613U box domain5 (1.92%)0010010111
IPR003657DNA-binding WRKY4 (1.54%)0000111001
IPR002109Glutaredoxin4 (1.54%)0101000110
IPR011905Glutaredoxin-like, plant II4 (1.54%)0101000110
IPR008422Homeobox KN domain4 (1.54%)0000010111
IPR012677Nucleotide-binding, alpha-beta plait4 (1.54%)2001010000
IPR000504RNA recognition motif domain4 (1.54%)2001010000
IPR012336Thioredoxin-like fold4 (1.54%)0101000110
IPR011991Winged helix-turn-helix DNA-binding domain4 (1.54%)0000012010
IPR001289CCAAT-binding transcription factor, subunit B3 (1.15%)0001110000
IPR013320Concanavalin A-like lectin/glucanase, subgroup3 (1.15%)0002010000
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal3 (1.15%)0010020000
IPR013781Glycoside hydrolase, catalytic domain3 (1.15%)0000000111
IPR000490Glycoside hydrolase, family 173 (1.15%)0000000111
IPR017853Glycoside hydrolase, superfamily3 (1.15%)0000000111
IPR000232Heat shock factor (HSF)-type, DNA-binding3 (1.15%)0000011010
IPR027725Heat shock transcription factor family3 (1.15%)0000011010
IPR027709Heat shock transcription factor, plant3 (1.15%)0000011010
IPR001611Leucine-rich repeat3 (1.15%)0000111000
IPR002921Lipase, class 33 (1.15%)1001001000
IPR016196Major facilitator superfamily domain, general substrate transporter3 (1.15%)2001000000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain3 (1.15%)0001200000
IPR006563POX domain3 (1.15%)0000010110
IPR006501Pectinesterase inhibitor domain3 (1.15%)2000010000
IPR011600Peptidase C14, caspase domain3 (1.15%)0010000101
IPR013626Pheophorbide a oxygenase3 (1.15%)0000020001
IPR003687Photosystem II PsbK3 (1.15%)0000120000
IPR000719Protein kinase domain3 (1.15%)0002010000
IPR011009Protein kinase-like domain3 (1.15%)0002010000
IPR004320Protein of unknown function DUF241, plant3 (1.15%)0000000120
IPR014014RNA helicase, DEAD-box type, Q motif3 (1.15%)0010020000
IPR017941Rieske [2Fe-2S] iron-sulphur domain3 (1.15%)0000020001
IPR001985S-adenosylmethionine decarboxylase3 (1.15%)0000210000
IPR018167S-adenosylmethionine decarboxylase subgroup3 (1.15%)0000210000
IPR018166S-adenosylmethionine decarboxylase, conserved site3 (1.15%)0000210000
IPR016067S-adenosylmethionine decarboxylase, core3 (1.15%)0000210000
IPR005299SAM dependent carboxyl methyltransferase3 (1.15%)0100100001
IPR013026Tetratricopeptide repeat-containing domain3 (1.15%)1000001100
IPR011990Tetratricopeptide-like helical3 (1.15%)1000001100
IPR001680WD40 repeat3 (1.15%)0000030000
IPR017986WD40-repeat-containing domain3 (1.15%)0000030000
IPR015943WD40/YVTN repeat-like-containing domain3 (1.15%)0000030000
IPR012946X83 (1.15%)0000000111
IPR003593AAA+ ATPase domain2 (0.77%)0001010000
IPR003439ABC transporter-like2 (0.77%)0000010010
IPR002068Alpha crystallin/Hsp20 domain2 (0.77%)0000200000
IPR020966Aluminum-activated malate transporter2 (0.77%)0100000001
IPR014733Barwin-like endoglucanase2 (0.77%)1001000000
IPR010402CCT domain2 (0.77%)0000200000
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 22 (0.77%)1000001000
IPR004022DDT domain2 (0.77%)0000010001
IPR000767Disease resistance protein2 (0.77%)0002000000
IPR009039EAR2 (0.77%)1000010000
IPR002963Expansin2 (0.77%)1001000000
IPR007117Expansin, cellulose-binding-like domain2 (0.77%)1001000000
IPR007118Expansin/Lol pI2 (0.77%)1001000000
IPR007112Expansin/pollen allergen, DPBB domain2 (0.77%)1001000000
IPR006094FAD linked oxidase, N-terminal2 (0.77%)1000001000
IPR016166FAD-binding, type 22 (0.77%)1000001000
IPR016167FAD-binding, type 2, subdomain 12 (0.77%)1000001000
IPR020472G-protein beta WD-40 repeat2 (0.77%)0000020000
IPR004883Lateral organ boundaries, LOB2 (0.77%)0000011000
IPR003591Leucine-rich repeat, typical subtype2 (0.77%)0001010000
IPR013210Leucine-rich repeat-containing N-terminal, type 22 (0.77%)0001010000
IPR024942Maturase MatK, N-terminal domain2 (0.77%)0000020000
IPR002182NB-ARC2 (0.77%)0002000000
IPR004518NTP pyrophosphohydrolase MazG, putative catalytic core2 (0.77%)1000010000
IPR027949Petal formation-expressed2 (0.77%)0000011000
IPR017441Protein kinase, ATP binding site2 (0.77%)0001010000
IPR006460Protein of unknown function DUF617, plant2 (0.77%)1000100000
IPR000109Proton-dependent oligopeptide transporter family2 (0.77%)1001000000
IPR011256Regulatory factor, effector binding domain2 (0.77%)0000200000
IPR009009RlpA-like double-psi beta-barrel domain2 (0.77%)1001000000
IPR000330SNF2-related2 (0.77%)1000100000
IPR006917SOUL haem-binding protein2 (0.77%)0000200000
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain2 (0.77%)0002000000
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain2 (0.77%)0001010000
IPR008271Serine/threonine-protein kinase, active site2 (0.77%)0001010000
IPR019734Tetratricopeptide repeat2 (0.77%)1000000100
IPR008889VQ2 (0.77%)0200000000
IPR007087Zinc finger, C2H22 (0.77%)0000000101
IPR017871ABC transporter, conserved site1 (0.38%)0000010000
IPR013525ABC-2 type transporter1 (0.38%)0000010000
IPR001471AP2/ERF domain1 (0.38%)1000000000
IPR017956AT hook, DNA-binding motif1 (0.38%)0000010000
IPR018082AmbAllergen1 (0.38%)0010000000
IPR024990Anaphase-promoting complex subunit 11 (0.38%)0000100000
IPR000225Armadillo1 (0.38%)0000010000
IPR003042Aromatic-ring hydroxylase-like1 (0.38%)0000001000
IPR025852Ataxin 2, SM domain1 (0.38%)0000010000
IPR009818Ataxin-2, C-terminal1 (0.38%)0000010000
IPR000916Bet v I domain1 (0.38%)0001000000
IPR024949Bet v I type allergen1 (0.38%)0001000000
IPR012675Beta-grasp domain1 (0.38%)0000001000
IPR001279Beta-lactamase-like1 (0.38%)0000001000
IPR004324Biopterin transport-related protein BT11 (0.38%)0100000000
IPR013591Brevis radix (BRX) domain1 (0.38%)0000001000
IPR000095CRIB domain1 (0.38%)0100000000
IPR001844Chaperonin Cpn601 (0.38%)0000001000
IPR018370Chaperonin Cpn60, conserved site1 (0.38%)0000001000
IPR002423Chaperonin Cpn60/TCP-11 (0.38%)0000001000
IPR011006CheY-like superfamily1 (0.38%)0000010000
IPR001128Cytochrome P4501 (0.38%)0000000001
IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain1 (0.38%)0000001000
IPR007173D-arabinono-1,4-lactone oxidase1 (0.38%)1000000000
IPR016177DNA-binding domain1 (0.38%)1000000000
IPR024937Domain X1 (0.38%)0000010000
IPR004314Domain of unknown function DUF2391 (0.38%)0000100000
IPR005175Domain of unknown function DUF2961 (0.38%)0000010000
IPR025315Domain of unknown function DUF42201 (0.38%)0001000000
IPR025521Domain of unknown function DUF44091 (0.38%)0000100000
IPR013029Domain of unknown function DUF9331 (0.38%)0000001000
IPR000620Drug/metabolite transporter1 (0.38%)0000100000
IPR001881EGF-like calcium-binding domain1 (0.38%)0001000000
IPR018097EGF-like calcium-binding, conserved site1 (0.38%)0001000000
IPR005539ELK1 (0.38%)0000000001
IPR012936Endoplasmic reticulum vesicle transporter, C-terminal1 (0.38%)0000000001
IPR001828Extracellular ligand-binding receptor1 (0.38%)0000000001
IPR001638Extracellular solute-binding protein, family 31 (0.38%)0000000001
IPR001810F-box domain1 (0.38%)0000000001
IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase1 (0.38%)0000010000
IPR016164FAD-linked oxidase-like, C-terminal1 (0.38%)0000001000
IPR000306FYVE zinc finger1 (0.38%)0000001000
IPR005804Fatty acid desaturase, type 11 (0.38%)0000000010
IPR020946Flavin monooxygenase-like1 (0.38%)0000010000
IPR012474Frigida-like1 (0.38%)0100000000
IPR006073GTP binding domain1 (0.38%)0000001000
IPR007867Glucose-methanol-choline oxidoreductase, C-terminal1 (0.38%)0000010000
IPR000172Glucose-methanol-choline oxidoreductase, N-terminal1 (0.38%)0000010000
IPR014978Glutamine-Leucine-Glutamine, QLQ1 (0.38%)0000000001
IPR014025Glutaredoxin subgroup1 (0.38%)0100000000
IPR003406Glycosyl transferase, family 141 (0.38%)0000001000
IPR027409GroEL-like apical domain1 (0.38%)0000001000
IPR027413GroEL-like equatorial domain1 (0.38%)0000001000
IPR023214HAD-like domain1 (0.38%)0000001000
IPR006379HAD-superfamily hydrolase, subfamily IIB1 (0.38%)0000001000
IPR003607HD/PDEase domain1 (0.38%)0000010000
IPR010255Haem peroxidase1 (0.38%)0001000000
IPR002016Haem peroxidase, plant/fungal/bacterial1 (0.38%)0001000000
IPR006121Heavy metal-associated domain, HMA1 (0.38%)0000010000
IPR025476Helitron helicase-like domain1 (0.38%)0000100000
IPR000560Histidine phosphatase superfamily, clade-21 (0.38%)0100000000
IPR001320Ionotropic glutamate receptor1 (0.38%)0000000001
IPR027443Isopenicillin N synthase-like1 (0.38%)0000001000
IPR004087K Homology domain1 (0.38%)0000010000
IPR004088K Homology domain, type 11 (0.38%)0000010000
IPR005540KNOX11 (0.38%)0000000001
IPR005541KNOX21 (0.38%)0000000001
IPR001752Kinesin, motor domain1 (0.38%)1000000000
IPR027640Kinesin-like protein1 (0.38%)1000000000
IPR003106Leucine zipper, homeobox-associated1 (0.38%)0001000000
IPR006553Leucine-rich repeat, cysteine-containing subtype1 (0.38%)0000000001
IPR010920Like-Sm (LSM) domain1 (0.38%)0000100000
IPR005818Linker histone H1/H5, domain H151 (0.38%)0000001000
IPR001087Lipase, GDSL1 (0.38%)1000000000
IPR008976Lipase/lipooxygenase, PLAT/LH21 (0.38%)0000000010
IPR000907Lipoxygenase1 (0.38%)0000000010
IPR013819Lipoxygenase, C-terminal1 (0.38%)0000000010
IPR020834Lipoxygenase, conserved site1 (0.38%)0000000010
IPR027433Lipoxygenase, domain 31 (0.38%)0000000010
IPR020833Lipoxygenase, iron binding site1 (0.38%)0000000010
IPR001246Lipoxygenase, plant1 (0.38%)0000000010
IPR024948Major latex protein domain1 (0.38%)0001000000
IPR002866Maturase MatK1 (0.38%)0000010000
IPR006685Mechanosensitive ion channel MscS1 (0.38%)0000100000
IPR002938Monooxygenase, FAD-binding1 (0.38%)0000001000
IPR016040NAD(P)-binding domain1 (0.38%)0010000000
IPR010227NADH-quinone oxidoreductase, chain M/41 (0.38%)0000000001
IPR003918NADH:ubiquinone oxidoreductase1 (0.38%)0000000001
IPR001750NADH:ubiquinone/plastoquinone oxidoreductase1 (0.38%)0000000001
IPR004142Ndr1 (0.38%)0000000001
IPR026992Non-haem dioxygenase N-terminal domain1 (0.38%)0000001000
IPR005123Oxoglutarate/iron-dependent dioxygenase1 (0.38%)0000001000
IPR006093Oxygen oxidoreductase covalent FAD-binding site1 (0.38%)0000001000
IPR001024PLAT/LH2 domain1 (0.38%)0000000010
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain1 (0.38%)0000000001
IPR002022Pectate lyase/Amb allergen1 (0.38%)0010000000
IPR012334Pectin lyase fold1 (0.38%)0010000000
IPR011050Pectin lyase fold/virulence factor1 (0.38%)0010000000
IPR001930Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase1 (0.38%)0001000000
IPR012779Peptidase M1, alanyl aminopeptidase1 (0.38%)0001000000
IPR024601Peptidase M1, alanyl aminopeptidase, C-terminal1 (0.38%)0001000000
IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal1 (0.38%)0001000000
IPR028082Periplasmic binding protein-like I1 (0.38%)0000000001
IPR000909Phospholipase C, phosphatidylinositol-specific , X domain1 (0.38%)0000000001
IPR001280Photosystem I PsaA/PsaB1 (0.38%)0000000100
IPR000823Plant peroxidase1 (0.38%)0001000000
IPR010030Plant-specific FAD-dependent oxidoreductase1 (0.38%)1000000000
IPR011993Pleckstrin homology-like domain1 (0.38%)0000001000
IPR015511Pollen specific protein SF211 (0.38%)0000000001
IPR008511Protein BYPASS-related1 (0.38%)0000100000
IPR022087Protein DA1 like1 (0.38%)0000010000
IPR021863Protein of unknown function DUF34741 (0.38%)0000000010
IPR022228Protein of unknown function DUF37551 (0.38%)1000000000
IPR007658Protein of unknown function DUF5941 (0.38%)0001000000
IPR008480Protein of unknown function DUF761, plant1 (0.38%)0000010000
IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II1 (0.38%)0000010000
IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site1 (0.38%)0010000000
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II1 (0.38%)0000001000
IPR000408Regulator of chromosome condensation, RCC11 (0.38%)0000001000
IPR007685RelA/SpoT1 (0.38%)0000010000
IPR013103Reverse transcriptase, RNA-dependent DNA polymerase1 (0.38%)0000000010
IPR004901Reversibly glycosylated polypeptide family1 (0.38%)0000010000
IPR012337Ribonuclease H-like domain1 (0.38%)0000000010
IPR004396Ribosome-binding ATPase YchF/Obg-like ATPase 11 (0.38%)0000001000
IPR013831SGNH hydrolase-type esterase domain1 (0.38%)1000000000
IPR007726SS18 family1 (0.38%)0010000000
IPR023393START-like domain1 (0.38%)0001000000
IPR005606Sec201 (0.38%)0000010000
IPR027944Sieve element occlusion, C-terminal1 (0.38%)0000100000
IPR027942Sieve element occlusion, N-terminal1 (0.38%)0000100000
IPR001789Signal transduction response regulator, receiver domain1 (0.38%)0000010000
IPR012676TGS-like1 (0.38%)0000001000
IPR023192TGS-like domain1 (0.38%)0000001000
IPR000727Target SNARE coiled-coil domain1 (0.38%)0000010000
IPR027988Transcription factor BREVIS RADIX, N-terminal domain1 (0.38%)0000001000
IPR003337Trehalose-phosphatase1 (0.38%)0000001000
IPR023026Tryptophan synthase beta chain/beta chain-like1 (0.38%)0000010000
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily1 (0.38%)0000010000
IPR006654Tryptophan synthase, beta chain1 (0.38%)0000010000
IPR006653Tryptophan synthase, beta chain, conserved site1 (0.38%)0000010000
IPR003903Ubiquitin interacting motif1 (0.38%)0000010000
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain1 (0.38%)0000001000
IPR008545WEB family1 (0.38%)0010000000
IPR014977WRC1 (0.38%)0000000001
IPR001202WW domain1 (0.38%)0010000000
IPR025287Wall-associated receptor kinase galacturonan-binding domain1 (0.38%)0001000000
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain1 (0.38%)0000000001
IPR015880Zinc finger, C2H2-like1 (0.38%)0000000001
IPR017455Zinc finger, FYVE-related1 (0.38%)0000001000
IPR011011Zinc finger, FYVE/PHD-type1 (0.38%)0000001000
IPR001781Zinc finger, LIM-type1 (0.38%)0000010000
IPR001841Zinc finger, RING-type1 (0.38%)0000001000