Gene Ontology terms associated with a binding site

Binding site
Motif_144
Name
DREB2A;DREB1A
Description
Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses
#Associated genes
22
#Associated GO terms
330
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell14 (63.64%)2210232002
GO:0044464cell part14 (63.64%)2210232002
GO:0005622intracellular13 (59.09%)2210222002
GO:0044424intracellular part12 (54.55%)2210221002
GO:0043231intracellular membrane-bounded organelle11 (50.00%)1210221002
GO:0043229intracellular organelle11 (50.00%)1210221002
GO:0043227membrane-bounded organelle11 (50.00%)1210221002
GO:0043226organelle11 (50.00%)1210221002
GO:0005634nucleus9 (40.91%)1100221002
GO:0005737cytoplasm3 (13.64%)1110000000
GO:0071944cell periphery2 (9.09%)1000010000
GO:0009507chloroplast2 (9.09%)0110000000
GO:0044444cytoplasmic part2 (9.09%)0110000000
GO:0016020membrane2 (9.09%)1100000000
GO:0009536plastid2 (9.09%)0110000000
GO:0005951carbamoyl-phosphate synthase complex1 (4.55%)0100000000
GO:1902494catalytic complex1 (4.55%)0100000000
GO:0030054cell junction1 (4.55%)1000000000
GO:0005618cell wall1 (4.55%)0000010000
GO:0005911cell-cell junction1 (4.55%)1000000000
GO:0044434chloroplast part1 (4.55%)0100000000
GO:0009570chloroplast stroma1 (4.55%)0100000000
GO:0030312external encapsulating structure1 (4.55%)0000010000
GO:0044446intracellular organelle part1 (4.55%)0100000000
GO:0032991macromolecular complex1 (4.55%)0100000000
GO:0044422organelle part1 (4.55%)0100000000
GO:0005886plasma membrane1 (4.55%)1000000000
GO:0009506plasmodesma1 (4.55%)1000000000
GO:0044435plastid part1 (4.55%)0100000000
GO:0009532plastid stroma1 (4.55%)0100000000
GO:0043234protein complex1 (4.55%)0100000000
GO:0055044symplast1 (4.55%)1000000000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding14 (63.64%)2210222003
GO:1901363heterocyclic compound binding10 (45.45%)2200221001
GO:0097159organic cyclic compound binding10 (45.45%)2200221001
GO:0005515protein binding10 (45.45%)1100221003
GO:0003677DNA binding8 (36.36%)1100221001
GO:0003676nucleic acid binding8 (36.36%)1100221001
GO:0046983protein dimerization activity8 (36.36%)1100221001
GO:0003824catalytic activity7 (31.82%)1100221000
GO:0043167ion binding6 (27.27%)1110001002
GO:0001071nucleic acid binding transcription factor activity6 (27.27%)1100111001
GO:0003700sequence-specific DNA binding transcription factor activity6 (27.27%)1100111001
GO:0043169cation binding5 (22.73%)0110001002
GO:0016787hydrolase activity5 (22.73%)0000221000
GO:0046872metal ion binding5 (22.73%)0110001002
GO:0016798hydrolase activity, acting on glycosyl bonds4 (18.18%)0000211000
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds4 (18.18%)0000211000
GO:0046914transition metal ion binding4 (18.18%)0010001002
GO:0008270zinc ion binding3 (13.64%)0000001002
GO:0005524ATP binding2 (9.09%)1100000000
GO:0030554adenyl nucleotide binding2 (9.09%)1100000000
GO:0032559adenyl ribonucleotide binding2 (9.09%)1100000000
GO:0043168anion binding2 (9.09%)1100000000
GO:0097367carbohydrate derivative binding2 (9.09%)1100000000
GO:0001882nucleoside binding2 (9.09%)1100000000
GO:1901265nucleoside phosphate binding2 (9.09%)1100000000
GO:0000166nucleotide binding2 (9.09%)1100000000
GO:0001883purine nucleoside binding2 (9.09%)1100000000
GO:0017076purine nucleotide binding2 (9.09%)1100000000
GO:0032550purine ribonucleoside binding2 (9.09%)1100000000
GO:0035639purine ribonucleoside triphosphate binding2 (9.09%)1100000000
GO:0032555purine ribonucleotide binding2 (9.09%)1100000000
GO:0032549ribonucleoside binding2 (9.09%)1100000000
GO:0032553ribonucleotide binding2 (9.09%)1100000000
GO:0036094small molecule binding2 (9.09%)1100000000
GO:0004088carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1 (4.55%)0100000000
GO:0016884carbon-nitrogen ligase activity, with glutamine as amido-N-donor1 (4.55%)0100000000
GO:0052689carboxylic ester hydrolase activity1 (4.55%)0000010000
GO:0009055electron carrier activity1 (4.55%)0010000000
GO:0004857enzyme inhibitor activity1 (4.55%)0000010000
GO:0030234enzyme regulator activity1 (4.55%)0000010000
GO:0016788hydrolase activity, acting on ester bonds1 (4.55%)0000010000
GO:0005506iron ion binding1 (4.55%)0010000000
GO:0051536iron-sulfur cluster binding1 (4.55%)0010000000
GO:0016301kinase activity1 (4.55%)1000000000
GO:0016874ligase activity1 (4.55%)0100000000
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (4.55%)0100000000
GO:0051540metal cluster binding1 (4.55%)0010000000
GO:0030599pectinesterase activity1 (4.55%)0000010000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (4.55%)1000000000
GO:0004672protein kinase activity1 (4.55%)1000000000
GO:0004674protein serine/threonine kinase activity1 (4.55%)1000000000
GO:0004712protein serine/threonine/tyrosine kinase activity1 (4.55%)1000000000
GO:0016740transferase activity1 (4.55%)1000000000
GO:0016772transferase activity, transferring phosphorus-containing groups1 (4.55%)1000000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process15 (68.18%)2200433001
GO:0009987cellular process14 (63.64%)2200332002
GO:0071704organic substance metabolic process14 (63.64%)2100433001
GO:0044238primary metabolic process14 (63.64%)2100433001
GO:0065007biological regulation11 (50.00%)2100222002
GO:0006807nitrogen compound metabolic process11 (50.00%)2200222001
GO:0050896response to stimulus11 (50.00%)1200232001
GO:0044699single-organism process11 (50.00%)2200212002
GO:0016070RNA metabolic process10 (45.45%)2100222001
GO:0009058biosynthetic process10 (45.45%)2100222001
GO:0006725cellular aromatic compound metabolic process10 (45.45%)2100222001
GO:0044249cellular biosynthetic process10 (45.45%)2100222001
GO:0044260cellular macromolecule metabolic process10 (45.45%)2100222001
GO:0044237cellular metabolic process10 (45.45%)2100222001
GO:0034641cellular nitrogen compound metabolic process10 (45.45%)2100222001
GO:0010467gene expression10 (45.45%)2100222001
GO:0046483heterocycle metabolic process10 (45.45%)2100222001
GO:0043170macromolecule metabolic process10 (45.45%)2100222001
GO:0090304nucleic acid metabolic process10 (45.45%)2100222001
GO:0006139nucleobase-containing compound metabolic process10 (45.45%)2100222001
GO:1901362organic cyclic compound biosynthetic process10 (45.45%)2100222001
GO:1901360organic cyclic compound metabolic process10 (45.45%)2100222001
GO:1901576organic substance biosynthetic process10 (45.45%)2100222001
GO:0050789regulation of biological process10 (45.45%)1100222002
GO:0050794regulation of cellular process10 (45.45%)1100222002
GO:0032774RNA biosynthetic process9 (40.91%)1100222001
GO:0019438aromatic compound biosynthetic process9 (40.91%)1100222001
GO:0034645cellular macromolecule biosynthetic process9 (40.91%)1100222001
GO:0044271cellular nitrogen compound biosynthetic process9 (40.91%)1100222001
GO:0018130heterocycle biosynthetic process9 (40.91%)1100222001
GO:0009059macromolecule biosynthetic process9 (40.91%)1100222001
GO:0034654nucleobase-containing compound biosynthetic process9 (40.91%)1100222001
GO:2001141regulation of RNA biosynthetic process9 (40.91%)1100222001
GO:0051252regulation of RNA metabolic process9 (40.91%)1100222001
GO:0009889regulation of biosynthetic process9 (40.91%)1100222001
GO:0031326regulation of cellular biosynthetic process9 (40.91%)1100222001
GO:2000112regulation of cellular macromolecule biosynthetic process9 (40.91%)1100222001
GO:0031323regulation of cellular metabolic process9 (40.91%)1100222001
GO:0010468regulation of gene expression9 (40.91%)1100222001
GO:0010556regulation of macromolecule biosynthetic process9 (40.91%)1100222001
GO:0060255regulation of macromolecule metabolic process9 (40.91%)1100222001
GO:0019222regulation of metabolic process9 (40.91%)1100222001
GO:0051171regulation of nitrogen compound metabolic process9 (40.91%)1100222001
GO:0019219regulation of nucleobase-containing compound metabolic process9 (40.91%)1100222001
GO:0080090regulation of primary metabolic process9 (40.91%)1100222001
GO:0006355regulation of transcription, DNA-dependent9 (40.91%)1100222001
GO:0042221response to chemical9 (40.91%)1100231001
GO:0009719response to endogenous stimulus9 (40.91%)1100231001
GO:0009725response to hormone9 (40.91%)1100231001
GO:0010033response to organic substance9 (40.91%)1100231001
GO:0006351transcription, DNA-templated9 (40.91%)1100222001
GO:0032502developmental process8 (36.36%)1100212001
GO:0044767single-organism developmental process8 (36.36%)1100212001
GO:0048856anatomical structure development7 (31.82%)1100112001
GO:0007275multicellular organismal development7 (31.82%)1100112001
GO:0032501multicellular organismal process7 (31.82%)1100112001
GO:0044707single-multicellular organism process7 (31.82%)1100112001
GO:0007568aging6 (27.27%)1100111001
GO:0048366leaf development6 (27.27%)1100111001
GO:0010150leaf senescence6 (27.27%)1100111001
GO:0051253negative regulation of RNA metabolic process6 (27.27%)1100111001
GO:0048519negative regulation of biological process6 (27.27%)1100111001
GO:0009890negative regulation of biosynthetic process6 (27.27%)1100111001
GO:0031327negative regulation of cellular biosynthetic process6 (27.27%)1100111001
GO:2000113negative regulation of cellular macromolecule biosynthetic process6 (27.27%)1100111001
GO:0031324negative regulation of cellular metabolic process6 (27.27%)1100111001
GO:0048523negative regulation of cellular process6 (27.27%)1100111001
GO:0010629negative regulation of gene expression6 (27.27%)1100111001
GO:0010558negative regulation of macromolecule biosynthetic process6 (27.27%)1100111001
GO:0010605negative regulation of macromolecule metabolic process6 (27.27%)1100111001
GO:0009892negative regulation of metabolic process6 (27.27%)1100111001
GO:0051172negative regulation of nitrogen compound metabolic process6 (27.27%)1100111001
GO:0045934negative regulation of nucleobase-containing compound metabolic process6 (27.27%)1100111001
GO:0045892negative regulation of transcription, DNA-dependent6 (27.27%)1100111001
GO:0048513organ development6 (27.27%)1100111001
GO:0010260organ senescence6 (27.27%)1100111001
GO:0048827phyllome development6 (27.27%)1100111001
GO:0009733response to auxin6 (27.27%)1100111001
GO:0048367shoot system development6 (27.27%)1100111001
GO:0048731system development6 (27.27%)1100111001
GO:0044763single-organism cellular process5 (22.73%)2100100001
GO:0005975carbohydrate metabolic process4 (18.18%)0000211000
GO:0006950response to stress4 (18.18%)1100011000
GO:0006396RNA processing2 (9.09%)2000000000
GO:0007154cell communication2 (9.09%)1100000000
GO:0016043cellular component organization2 (9.09%)1000010000
GO:0071840cellular component organization or biogenesis2 (9.09%)1000010000
GO:0051716cellular response to stimulus2 (9.09%)1100000000
GO:0043412macromolecule modification2 (9.09%)2000000000
GO:0065008regulation of biological quality2 (9.09%)2000000000
GO:0009628response to abiotic stimulus2 (9.09%)0000011000
GO:0009409response to cold2 (9.09%)0000011000
GO:0014070response to organic cyclic compound2 (9.09%)1000010000
GO:0009266response to temperature stimulus2 (9.09%)0000011000
GO:0044710single-organism metabolic process2 (9.09%)2000000000
GO:0006305DNA alkylation1 (4.55%)1000000000
GO:0006259DNA metabolic process1 (4.55%)1000000000
GO:0006306DNA methylation1 (4.55%)1000000000
GO:0044728DNA methylation or demethylation1 (4.55%)1000000000
GO:0006304DNA modification1 (4.55%)1000000000
GO:0016246RNA interference1 (4.55%)1000000000
GO:0008380RNA splicing1 (4.55%)1000000000
GO:0000394RNA splicing, via endonucleolytic cleavage and ligation1 (4.55%)1000000000
GO:0006084acetyl-CoA metabolic process1 (4.55%)1000000000
GO:0006637acyl-CoA metabolic process1 (4.55%)1000000000
GO:0046165alcohol biosynthetic process1 (4.55%)1000000000
GO:0006066alcohol metabolic process1 (4.55%)1000000000
GO:1901607alpha-amino acid biosynthetic process1 (4.55%)1000000000
GO:1901605alpha-amino acid metabolic process1 (4.55%)1000000000
GO:0009067aspartate family amino acid biosynthetic process1 (4.55%)1000000000
GO:0009066aspartate family amino acid metabolic process1 (4.55%)1000000000
GO:0009734auxin mediated signaling pathway1 (4.55%)1000000000
GO:0016132brassinosteroid biosynthetic process1 (4.55%)1000000000
GO:0016131brassinosteroid metabolic process1 (4.55%)1000000000
GO:0046394carboxylic acid biosynthetic process1 (4.55%)1000000000
GO:0019752carboxylic acid metabolic process1 (4.55%)1000000000
GO:0008219cell death1 (4.55%)0000000001
GO:0030154cell differentiation1 (4.55%)0000100000
GO:0042545cell wall modification1 (4.55%)0000010000
GO:0071555cell wall organization1 (4.55%)0000010000
GO:0071554cell wall organization or biogenesis1 (4.55%)0000010000
GO:0007267cell-cell signaling1 (4.55%)1000000000
GO:0008652cellular amino acid biosynthetic process1 (4.55%)1000000000
GO:0006520cellular amino acid metabolic process1 (4.55%)1000000000
GO:0048869cellular developmental process1 (4.55%)0000100000
GO:0044267cellular protein metabolic process1 (4.55%)1000000000
GO:0006464cellular protein modification process1 (4.55%)1000000000
GO:0071365cellular response to auxin stimulus1 (4.55%)1000000000
GO:0070887cellular response to chemical stimulus1 (4.55%)1000000000
GO:0071359cellular response to dsRNA1 (4.55%)1000000000
GO:0071495cellular response to endogenous stimulus1 (4.55%)1000000000
GO:0071496cellular response to external stimulus1 (4.55%)0100000000
GO:0031668cellular response to extracellular stimulus1 (4.55%)0100000000
GO:0032870cellular response to hormone stimulus1 (4.55%)1000000000
GO:1901699cellular response to nitrogen compound1 (4.55%)1000000000
GO:0031669cellular response to nutrient levels1 (4.55%)0100000000
GO:0071407cellular response to organic cyclic compound1 (4.55%)1000000000
GO:0071310cellular response to organic substance1 (4.55%)1000000000
GO:0016036cellular response to phosphate starvation1 (4.55%)0100000000
GO:0009267cellular response to starvation1 (4.55%)0100000000
GO:0033554cellular response to stress1 (4.55%)0100000000
GO:0016568chromatin modification1 (4.55%)1000000000
GO:0006325chromatin organization1 (4.55%)1000000000
GO:0006342chromatin silencing1 (4.55%)1000000000
GO:0051276chromosome organization1 (4.55%)1000000000
GO:0006732coenzyme metabolic process1 (4.55%)1000000000
GO:0051186cofactor metabolic process1 (4.55%)1000000000
GO:0016569covalent chromatin modification1 (4.55%)1000000000
GO:0019344cysteine biosynthetic process1 (4.55%)1000000000
GO:0006534cysteine metabolic process1 (4.55%)1000000000
GO:0016265death1 (4.55%)0000000001
GO:0006952defense response1 (4.55%)1000000000
GO:0098542defense response to other organism1 (4.55%)1000000000
GO:0051607defense response to virus1 (4.55%)1000000000
GO:0031050dsRNA fragmentation1 (4.55%)1000000000
GO:0045229external encapsulating structure organization1 (4.55%)0000010000
GO:0048229gametophyte development1 (4.55%)0000001000
GO:0016458gene silencing1 (4.55%)1000000000
GO:0031047gene silencing by RNA1 (4.55%)1000000000
GO:0035195gene silencing by miRNA1 (4.55%)1000000000
GO:0042446hormone biosynthetic process1 (4.55%)1000000000
GO:0042445hormone metabolic process1 (4.55%)1000000000
GO:0009755hormone-mediated signaling pathway1 (4.55%)1000000000
GO:0002252immune effector process1 (4.55%)1000000000
GO:0006955immune response1 (4.55%)1000000000
GO:0002376immune system process1 (4.55%)1000000000
GO:0045087innate immune response1 (4.55%)1000000000
GO:0051701interaction with host1 (4.55%)1000000000
GO:0044419interspecies interaction between organisms1 (4.55%)1000000000
GO:0008610lipid biosynthetic process1 (4.55%)1000000000
GO:0006629lipid metabolic process1 (4.55%)1000000000
GO:0043414macromolecule methylation1 (4.55%)1000000000
GO:0009086methionine biosynthetic process1 (4.55%)1000000000
GO:0006555methionine metabolic process1 (4.55%)1000000000
GO:0032259methylation1 (4.55%)1000000000
GO:0006346methylation-dependent chromatin silencing1 (4.55%)1000000000
GO:0044003modification by symbiont of host morphology or physiology1 (4.55%)1000000000
GO:0035821modification of morphology or physiology of other organism1 (4.55%)1000000000
GO:0051817modification of morphology or physiology of other organism involved in symbiotic interaction1 (4.55%)1000000000
GO:0052018modulation by symbiont of RNA levels in host1 (4.55%)1000000000
GO:0052249modulation of RNA levels in other organism involved in symbiotic interaction1 (4.55%)1000000000
GO:0051704multi-organism process1 (4.55%)1000000000
GO:0045814negative regulation of gene expression, epigenetic1 (4.55%)1000000000
GO:0006996organelle organization1 (4.55%)1000000000
GO:0016053organic acid biosynthetic process1 (4.55%)1000000000
GO:0006082organic acid metabolic process1 (4.55%)1000000000
GO:1901617organic hydroxy compound biosynthetic process1 (4.55%)1000000000
GO:1901615organic hydroxy compound metabolic process1 (4.55%)1000000000
GO:1901566organonitrogen compound biosynthetic process1 (4.55%)1000000000
GO:1901564organonitrogen compound metabolic process1 (4.55%)1000000000
GO:0043436oxoacid metabolic process1 (4.55%)1000000000
GO:0006796phosphate-containing compound metabolic process1 (4.55%)1000000000
GO:0006793phosphorus metabolic process1 (4.55%)1000000000
GO:0016310phosphorylation1 (4.55%)1000000000
GO:0016129phytosteroid biosynthetic process1 (4.55%)1000000000
GO:0016128phytosteroid metabolic process1 (4.55%)1000000000
GO:0009555pollen development1 (4.55%)0000001000
GO:0016441posttranscriptional gene silencing1 (4.55%)1000000000
GO:0035194posttranscriptional gene silencing by RNA1 (4.55%)1000000000
GO:0010608posttranscriptional regulation of gene expression1 (4.55%)1000000000
GO:0035196production of miRNAs involved in gene silencing by miRNA1 (4.55%)1000000000
GO:0030422production of siRNA involved in RNA interference1 (4.55%)1000000000
GO:0070918production of small RNA involved in gene silencing by RNA1 (4.55%)1000000000
GO:0010267production of ta-siRNAs involved in RNA interference1 (4.55%)1000000000
GO:0012501programmed cell death1 (4.55%)0000000001
GO:0019538protein metabolic process1 (4.55%)1000000000
GO:0036211protein modification process1 (4.55%)1000000000
GO:0006468protein phosphorylation1 (4.55%)1000000000
GO:0010941regulation of cell death1 (4.55%)0000000001
GO:0040029regulation of gene expression, epigenetic1 (4.55%)1000000000
GO:0010817regulation of hormone levels1 (4.55%)1000000000
GO:0043067regulation of programmed cell death1 (4.55%)0000000001
GO:0097305response to alcohol1 (4.55%)0000010000
GO:0009607response to biotic stimulus1 (4.55%)1000000000
GO:0009741response to brassinosteroid1 (4.55%)0000010000
GO:0043331response to dsRNA1 (4.55%)1000000000
GO:0009605response to external stimulus1 (4.55%)0100000000
GO:0009991response to extracellular stimulus1 (4.55%)0100000000
GO:0033993response to lipid1 (4.55%)0000010000
GO:1901698response to nitrogen compound1 (4.55%)1000000000
GO:0031667response to nutrient levels1 (4.55%)0100000000
GO:0051707response to other organism1 (4.55%)1000000000
GO:1901700response to oxygen-containing compound1 (4.55%)0000010000
GO:0042594response to starvation1 (4.55%)0100000000
GO:0009615response to virus1 (4.55%)1000000000
GO:0009070serine family amino acid biosynthetic process1 (4.55%)1000000000
GO:0009069serine family amino acid metabolic process1 (4.55%)1000000000
GO:0007165signal transduction1 (4.55%)1000000000
GO:0023052signaling1 (4.55%)1000000000
GO:0044700single organism signaling1 (4.55%)1000000000
GO:0044711single-organism biosynthetic process1 (4.55%)1000000000
GO:0044283small molecule biosynthetic process1 (4.55%)1000000000
GO:0044281small molecule metabolic process1 (4.55%)1000000000
GO:0006694steroid biosynthetic process1 (4.55%)1000000000
GO:0008202steroid metabolic process1 (4.55%)1000000000
GO:0016126sterol biosynthetic process1 (4.55%)1000000000
GO:0016125sterol metabolic process1 (4.55%)1000000000
GO:0000097sulfur amino acid biosynthetic process1 (4.55%)1000000000
GO:0000096sulfur amino acid metabolic process1 (4.55%)1000000000
GO:0044272sulfur compound biosynthetic process1 (4.55%)1000000000
GO:0006790sulfur compound metabolic process1 (4.55%)1000000000
GO:0044403symbiosis, encompassing mutualism through parasitism1 (4.55%)1000000000
GO:0035383thioester metabolic process1 (4.55%)1000000000
GO:0009616virus induced gene silencing1 (4.55%)1000000000