Gene Ontology terms associated with a binding site

Binding site
Motif_140
Name
DREB2A;DREB1A
Description
Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses
#Associated genes
11
#Associated GO terms
282
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell8 (72.73%)2002110002
GO:0044464cell part8 (72.73%)2002110002
GO:0005622intracellular8 (72.73%)2002110002
GO:0044424intracellular part8 (72.73%)2002110002
GO:0043231intracellular membrane-bounded organelle6 (54.55%)0002110002
GO:0043229intracellular organelle6 (54.55%)0002110002
GO:0043227membrane-bounded organelle6 (54.55%)0002110002
GO:0043226organelle6 (54.55%)0002110002
GO:0005737cytoplasm4 (36.36%)2001000001
GO:0005634nucleus4 (36.36%)0001110001
GO:0044446intracellular organelle part3 (27.27%)0001100001
GO:0044422organelle part3 (27.27%)0001100001
GO:0044444cytoplasmic part2 (18.18%)0001000001
GO:0016020membrane2 (18.18%)0001000001
GO:0016602CCAAT-binding factor complex1 (9.09%)0000100000
GO:0005794Golgi apparatus1 (9.09%)0001000000
GO:0044431Golgi apparatus part1 (9.09%)0001000000
GO:0000139Golgi membrane1 (9.09%)0001000000
GO:0009507chloroplast1 (9.09%)0000000001
GO:0044434chloroplast part1 (9.09%)0000000001
GO:0009570chloroplast stroma1 (9.09%)0000000001
GO:0009534chloroplast thylakoid1 (9.09%)0000000001
GO:0009535chloroplast thylakoid membrane1 (9.09%)0000000001
GO:0012505endomembrane system1 (9.09%)0001000000
GO:0005768endosome1 (9.09%)0001000000
GO:0030173integral to Golgi membrane1 (9.09%)0001000000
GO:0016021integral to membrane1 (9.09%)0001000000
GO:0031301integral to organelle membrane1 (9.09%)0001000000
GO:0031228intrinsic to Golgi membrane1 (9.09%)0001000000
GO:0031224intrinsic to membrane1 (9.09%)0001000000
GO:0031300intrinsic to organelle membrane1 (9.09%)0001000000
GO:0032991macromolecular complex1 (9.09%)0000100000
GO:0044425membrane part1 (9.09%)0001000000
GO:0044428nuclear part1 (9.09%)0000100000
GO:0044798nuclear transcription factor complex1 (9.09%)0000100000
GO:0031090organelle membrane1 (9.09%)0001000000
GO:0031984organelle subcompartment1 (9.09%)0000000001
GO:0034357photosynthetic membrane1 (9.09%)0000000001
GO:0009536plastid1 (9.09%)0000000001
GO:0044435plastid part1 (9.09%)0000000001
GO:0009532plastid stroma1 (9.09%)0000000001
GO:0031976plastid thylakoid1 (9.09%)0000000001
GO:0055035plastid thylakoid membrane1 (9.09%)0000000001
GO:0043234protein complex1 (9.09%)0000100000
GO:0009579thylakoid1 (9.09%)0000000001
GO:0042651thylakoid membrane1 (9.09%)0000000001
GO:0044436thylakoid part1 (9.09%)0000000001
GO:0005802trans-Golgi network1 (9.09%)0001000000
GO:0005667transcription factor complex1 (9.09%)0000100000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding9 (81.82%)2011130001
GO:0005515protein binding8 (72.73%)2011030001
GO:0003824catalytic activity6 (54.55%)2001020001
GO:00168471-aminocyclopropane-1-carboxylate synthase activity4 (36.36%)2000020000
GO:0043168anion binding4 (36.36%)2000020000
GO:0016846carbon-sulfur lyase activity4 (36.36%)2000020000
GO:0048037cofactor binding4 (36.36%)2000020000
GO:0042802identical protein binding4 (36.36%)2000020000
GO:0043167ion binding4 (36.36%)2000020000
GO:0016829lyase activity4 (36.36%)2000020000
GO:0030170pyridoxal phosphate binding4 (36.36%)2000020000
GO:0046983protein dimerization activity3 (27.27%)0001010001
GO:0016740transferase activity3 (27.27%)0001020000
GO:0003677DNA binding2 (18.18%)0001100000
GO:1901363heterocyclic compound binding2 (18.18%)0001100000
GO:0003676nucleic acid binding2 (18.18%)0001100000
GO:0001071nucleic acid binding transcription factor activity2 (18.18%)0001100000
GO:0097159organic cyclic compound binding2 (18.18%)0001100000
GO:0003700sequence-specific DNA binding transcription factor activity2 (18.18%)0001100000
GO:0016769transferase activity, transferring nitrogenous groups2 (18.18%)0000020000
GO:00455499-cis-epoxycarotenoid dioxygenase activity1 (9.09%)0000000001
GO:0010436carotenoid dioxygenase activity1 (9.09%)0000000001
GO:0051213dioxygenase activity1 (9.09%)0000000001
GO:0016491oxidoreductase activity1 (9.09%)0000000001
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen1 (9.09%)0000000001
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1 (9.09%)0000000001
GO:0016757transferase activity, transferring glycosyl groups1 (9.09%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process11 (100.00%)2012130002
GO:0009058biosynthetic process10 (90.91%)2002130002
GO:0044249cellular biosynthetic process10 (90.91%)2002130002
GO:0044237cellular metabolic process10 (90.91%)2002130002
GO:0008152metabolic process10 (90.91%)2002130002
GO:1901576organic substance biosynthetic process10 (90.91%)2002130002
GO:0071704organic substance metabolic process10 (90.91%)2002130002
GO:0044238primary metabolic process10 (90.91%)2002130002
GO:0065007biological regulation9 (81.82%)2002130001
GO:0034645cellular macromolecule biosynthetic process9 (81.82%)2002130001
GO:0044260cellular macromolecule metabolic process9 (81.82%)2002130001
GO:0009059macromolecule biosynthetic process9 (81.82%)2002130001
GO:0043170macromolecule metabolic process9 (81.82%)2002130001
GO:0050789regulation of biological process9 (81.82%)2002130001
GO:0050794regulation of cellular process9 (81.82%)2002130001
GO:0010467gene expression8 (72.73%)2001130001
GO:0009889regulation of biosynthetic process8 (72.73%)2001130001
GO:0031326regulation of cellular biosynthetic process8 (72.73%)2001130001
GO:2000112regulation of cellular macromolecule biosynthetic process8 (72.73%)2001130001
GO:0031323regulation of cellular metabolic process8 (72.73%)2001130001
GO:0010468regulation of gene expression8 (72.73%)2001130001
GO:0010556regulation of macromolecule biosynthetic process8 (72.73%)2001130001
GO:0060255regulation of macromolecule metabolic process8 (72.73%)2001130001
GO:0019222regulation of metabolic process8 (72.73%)2001130001
GO:0080090regulation of primary metabolic process8 (72.73%)2001130001
GO:0050896response to stimulus8 (72.73%)2002020002
GO:0042221response to chemical7 (63.64%)2001020002
GO:0044699single-organism process7 (63.64%)2002020001
GO:0010033response to organic substance6 (54.55%)2001020001
GO:0044763single-organism cellular process6 (54.55%)2001020001
GO:0048856anatomical structure development5 (45.45%)2002000001
GO:0070887cellular response to chemical stimulus5 (45.45%)2001020000
GO:0051716cellular response to stimulus5 (45.45%)2001020000
GO:0032502developmental process5 (45.45%)2002000001
GO:0009733response to auxin5 (45.45%)2000020001
GO:0009719response to endogenous stimulus5 (45.45%)2000020001
GO:0009725response to hormone5 (45.45%)2000020001
GO:0010035response to inorganic substance5 (45.45%)2000020001
GO:0044767single-organism developmental process5 (45.45%)2002000001
GO:0032774RNA biosynthetic process4 (36.36%)0001110001
GO:0016070RNA metabolic process4 (36.36%)0001110001
GO:0043450alkene biosynthetic process4 (36.36%)2000020000
GO:0019438aromatic compound biosynthetic process4 (36.36%)0001110001
GO:0043449cellular alkene metabolic process4 (36.36%)2000020000
GO:0006725cellular aromatic compound metabolic process4 (36.36%)0001110001
GO:0044271cellular nitrogen compound biosynthetic process4 (36.36%)0001110001
GO:0034641cellular nitrogen compound metabolic process4 (36.36%)0001110001
GO:0044267cellular protein metabolic process4 (36.36%)2000020000
GO:0071241cellular response to inorganic substance4 (36.36%)2000020000
GO:0071281cellular response to iron ion4 (36.36%)2000020000
GO:0071248cellular response to metal ion4 (36.36%)2000020000
GO:0009693ethylene biosynthetic process4 (36.36%)2000020000
GO:0009692ethylene metabolic process4 (36.36%)2000020000
GO:0018130heterocycle biosynthetic process4 (36.36%)0001110001
GO:0046483heterocycle metabolic process4 (36.36%)0001110001
GO:0007275multicellular organismal development4 (36.36%)2001000001
GO:0032501multicellular organismal process4 (36.36%)2001000001
GO:0006807nitrogen compound metabolic process4 (36.36%)0001110001
GO:0090304nucleic acid metabolic process4 (36.36%)0001110001
GO:0034654nucleobase-containing compound biosynthetic process4 (36.36%)0001110001
GO:0006139nucleobase-containing compound metabolic process4 (36.36%)0001110001
GO:1900674olefin biosynthetic process4 (36.36%)2000020000
GO:1900673olefin metabolic process4 (36.36%)2000020000
GO:1901362organic cyclic compound biosynthetic process4 (36.36%)0001110001
GO:1901360organic cyclic compound metabolic process4 (36.36%)0001110001
GO:0010608posttranscriptional regulation of gene expression4 (36.36%)2000020000
GO:0019538protein metabolic process4 (36.36%)2000020000
GO:2001141regulation of RNA biosynthetic process4 (36.36%)0001110001
GO:0051252regulation of RNA metabolic process4 (36.36%)0001110001
GO:0032268regulation of cellular protein metabolic process4 (36.36%)2000020000
GO:0051171regulation of nitrogen compound metabolic process4 (36.36%)0001110001
GO:0019219regulation of nucleobase-containing compound metabolic process4 (36.36%)0001110001
GO:0051246regulation of protein metabolic process4 (36.36%)2000020000
GO:0006355regulation of transcription, DNA-dependent4 (36.36%)0001110001
GO:0006417regulation of translation4 (36.36%)2000020000
GO:0009735response to cytokinin4 (36.36%)2000020000
GO:0010039response to iron ion4 (36.36%)2000020000
GO:0010038response to metal ion4 (36.36%)2000020000
GO:0044707single-multicellular organism process4 (36.36%)2001000001
GO:0048731system development4 (36.36%)2001000001
GO:0006351transcription, DNA-templated4 (36.36%)0001110001
GO:0006412translation4 (36.36%)2000020000
GO:0003006developmental process involved in reproduction3 (27.27%)2000000001
GO:0010154fruit development3 (27.27%)2000000001
GO:0000003reproduction3 (27.27%)2000000001
GO:0022414reproductive process3 (27.27%)2000000001
GO:0048608reproductive structure development3 (27.27%)2000000001
GO:0061458reproductive system development3 (27.27%)2000000001
GO:1901700response to oxygen-containing compound3 (27.27%)1001000001
GO:0044702single organism reproductive process3 (27.27%)2000000001
GO:0007568aging2 (18.18%)2000000000
GO:0071695anatomical structure maturation2 (18.18%)2000000000
GO:0021700developmental maturation2 (18.18%)2000000000
GO:0009835fruit ripening2 (18.18%)2000000000
GO:0009628response to abiotic stimulus2 (18.18%)0001000001
GO:0006950response to stress2 (18.18%)0001000001
GO:0044711single-organism biosynthetic process2 (18.18%)0001000001
GO:0044710single-organism metabolic process2 (18.18%)0001000001
GO:0009294DNA mediated transformation1 (9.09%)0010000000
GO:0009688abscisic acid biosynthetic process1 (9.09%)0000000001
GO:0009687abscisic acid metabolic process1 (9.09%)0000000001
GO:0046165alcohol biosynthetic process1 (9.09%)0000000001
GO:0006066alcohol metabolic process1 (9.09%)0000000001
GO:0009653anatomical structure morphogenesis1 (9.09%)0001000000
GO:0043289apocarotenoid biosynthetic process1 (9.09%)0000000001
GO:0043288apocarotenoid metabolic process1 (9.09%)0000000001
GO:0016051carbohydrate biosynthetic process1 (9.09%)0001000000
GO:0005975carbohydrate metabolic process1 (9.09%)0001000000
GO:0046394carboxylic acid biosynthetic process1 (9.09%)0000000001
GO:0019752carboxylic acid metabolic process1 (9.09%)0000000001
GO:0007154cell communication1 (9.09%)0001000000
GO:0016049cell growth1 (9.09%)0001000000
GO:0000902cell morphogenesis1 (9.09%)0001000000
GO:0044036cell wall macromolecule metabolic process1 (9.09%)0001000000
GO:0071554cell wall organization or biogenesis1 (9.09%)0001000000
GO:0010383cell wall polysaccharide metabolic process1 (9.09%)0001000000
GO:0034637cellular carbohydrate biosynthetic process1 (9.09%)0001000000
GO:0044262cellular carbohydrate metabolic process1 (9.09%)0001000000
GO:0032989cellular component morphogenesis1 (9.09%)0001000000
GO:0016043cellular component organization1 (9.09%)0001000000
GO:0071840cellular component organization or biogenesis1 (9.09%)0001000000
GO:0048869cellular developmental process1 (9.09%)0001000000
GO:0006073cellular glucan metabolic process1 (9.09%)0001000000
GO:0044255cellular lipid metabolic process1 (9.09%)0000000001
GO:0033692cellular polysaccharide biosynthetic process1 (9.09%)0001000000
GO:0044264cellular polysaccharide metabolic process1 (9.09%)0001000000
GO:0071407cellular response to organic cyclic compound1 (9.09%)0001000000
GO:0071310cellular response to organic substance1 (9.09%)0001000000
GO:1901701cellular response to oxygen-containing compound1 (9.09%)0001000000
GO:0071446cellular response to salicylic acid stimulus1 (9.09%)0001000000
GO:0048589developmental growth1 (9.09%)0001000000
GO:0060560developmental growth involved in morphogenesis1 (9.09%)0001000000
GO:0022611dormancy process1 (9.09%)0000000001
GO:0010256endomembrane system organization1 (9.09%)0001000000
GO:0042353fucose biosynthetic process1 (9.09%)0001000000
GO:0006004fucose metabolic process1 (9.09%)0001000000
GO:0009292genetic transfer1 (9.09%)0010000000
GO:0009250glucan biosynthetic process1 (9.09%)0001000000
GO:0044042glucan metabolic process1 (9.09%)0001000000
GO:0040007growth1 (9.09%)0001000000
GO:0010410hemicellulose metabolic process1 (9.09%)0001000000
GO:0019319hexose biosynthetic process1 (9.09%)0001000000
GO:0019318hexose metabolic process1 (9.09%)0001000000
GO:0006972hyperosmotic response1 (9.09%)0000000001
GO:0042538hyperosmotic salinity response1 (9.09%)0000000001
GO:0008299isoprenoid biosynthetic process1 (9.09%)0000000001
GO:0006720isoprenoid metabolic process1 (9.09%)0000000001
GO:0008610lipid biosynthetic process1 (9.09%)0000000001
GO:0006629lipid metabolic process1 (9.09%)0000000001
GO:0061024membrane organization1 (9.09%)0001000000
GO:0048507meristem development1 (9.09%)0001000000
GO:0072330monocarboxylic acid biosynthetic process1 (9.09%)0000000001
GO:0032787monocarboxylic acid metabolic process1 (9.09%)0000000001
GO:0046364monosaccharide biosynthetic process1 (9.09%)0001000000
GO:0005996monosaccharide metabolic process1 (9.09%)0001000000
GO:0044764multi-organism cellular process1 (9.09%)0010000000
GO:0051704multi-organism process1 (9.09%)0010000000
GO:0032504multicellular organism reproduction1 (9.09%)0000000001
GO:0048609multicellular organismal reproductive process1 (9.09%)0000000001
GO:0048513organ development1 (9.09%)0001000000
GO:0016053organic acid biosynthetic process1 (9.09%)0000000001
GO:0006082organic acid metabolic process1 (9.09%)0000000001
GO:1901617organic hydroxy compound biosynthetic process1 (9.09%)0000000001
GO:1901615organic hydroxy compound metabolic process1 (9.09%)0000000001
GO:0043436oxoacid metabolic process1 (9.09%)0000000001
GO:0000271polysaccharide biosynthetic process1 (9.09%)0001000000
GO:0005976polysaccharide metabolic process1 (9.09%)0001000000
GO:0009791post-embryonic development1 (9.09%)0000000001
GO:0040034regulation of development, heterochronic1 (9.09%)0001000000
GO:0050793regulation of developmental process1 (9.09%)0001000000
GO:0048509regulation of meristem development1 (9.09%)0001000000
GO:2000026regulation of multicellular organismal development1 (9.09%)0001000000
GO:0051239regulation of multicellular organismal process1 (9.09%)0001000000
GO:0048506regulation of timing of meristematic phase transition1 (9.09%)0001000000
GO:0048510regulation of timing of transition from vegetative to reproductive phase1 (9.09%)0001000000
GO:0010200response to chitin1 (9.09%)1000000000
GO:0009409response to cold1 (9.09%)0001000000
GO:1901698response to nitrogen compound1 (9.09%)1000000000
GO:0014070response to organic cyclic compound1 (9.09%)0001000000
GO:0010243response to organonitrogen compound1 (9.09%)1000000000
GO:0006970response to osmotic stress1 (9.09%)0000000001
GO:0009751response to salicylic acid1 (9.09%)0001000000
GO:0009651response to salt stress1 (9.09%)0000000001
GO:0009266response to temperature stimulus1 (9.09%)0001000000
GO:0009415response to water1 (9.09%)0000000001
GO:0009414response to water deprivation1 (9.09%)0000000001
GO:0009863salicylic acid mediated signaling pathway1 (9.09%)0001000000
GO:0048316seed development1 (9.09%)0000000001
GO:0010162seed dormancy process1 (9.09%)0000000001
GO:0010431seed maturation1 (9.09%)0000000001
GO:0016106sesquiterpenoid biosynthetic process1 (9.09%)0000000001
GO:0006714sesquiterpenoid metabolic process1 (9.09%)0000000001
GO:0007165signal transduction1 (9.09%)0001000000
GO:0023052signaling1 (9.09%)0001000000
GO:0044700single organism signaling1 (9.09%)0001000000
GO:0044723single-organism carbohydrate metabolic process1 (9.09%)0001000000
GO:0044802single-organism membrane organization1 (9.09%)0001000000
GO:0044283small molecule biosynthetic process1 (9.09%)0000000001
GO:0044281small molecule metabolic process1 (9.09%)0000000001
GO:0016114terpenoid biosynthetic process1 (9.09%)0000000001
GO:0006721terpenoid metabolic process1 (9.09%)0000000001
GO:0009888tissue development1 (9.09%)0001000000
GO:0009826unidimensional cell growth1 (9.09%)0001000000
GO:0010048vernalization response1 (9.09%)0001000000
GO:0009969xyloglucan biosynthetic process1 (9.09%)0001000000
GO:0010411xyloglucan metabolic process1 (9.09%)0001000000