Gene Ontology terms associated with a binding site

Binding site
Motif_100
Name
DREB2A;DREB1A
Description
Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses
#Associated genes
17
#Associated GO terms
320
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell9 (52.94%)1021121001
GO:0044464cell part9 (52.94%)1021121001
GO:0005622intracellular9 (52.94%)1021121001
GO:0044424intracellular part9 (52.94%)1021121001
GO:0005737cytoplasm5 (29.41%)1011010001
GO:0043231intracellular membrane-bounded organelle5 (29.41%)0020110001
GO:0043229intracellular organelle5 (29.41%)0020110001
GO:0043227membrane-bounded organelle5 (29.41%)0020110001
GO:0043226organelle5 (29.41%)0020110001
GO:1902494catalytic complex4 (23.53%)1001011000
GO:0032991macromolecular complex4 (23.53%)1001011000
GO:0005634nucleus4 (23.53%)0020110000
GO:0043234protein complex4 (23.53%)1001011000
GO:0044444cytoplasmic part3 (17.65%)0001010001
GO:0000151ubiquitin ligase complex3 (17.65%)1000011000
GO:0005829cytosol2 (11.76%)0001010000
GO:0016020membrane2 (11.76%)1000000001
GO:0005794Golgi apparatus1 (5.88%)0000000001
GO:0005783endoplasmic reticulum1 (5.88%)0000000001
GO:0009331glycerol-3-phosphate dehydrogenase complex1 (5.88%)0001000000
GO:0016021integral to membrane1 (5.88%)1000000000
GO:0044446intracellular organelle part1 (5.88%)0000000001
GO:0031224intrinsic to membrane1 (5.88%)1000000000
GO:0044425membrane part1 (5.88%)1000000000
GO:0031090organelle membrane1 (5.88%)0000000001
GO:0044422organelle part1 (5.88%)0000000001
GO:1990204oxidoreductase complex1 (5.88%)0001000000
GO:0005774vacuolar membrane1 (5.88%)0000000001
GO:0044437vacuolar part1 (5.88%)0000000001
GO:0005773vacuole1 (5.88%)0000000001

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0003824catalytic activity10 (58.82%)1021231000
GO:0005488binding9 (52.94%)1011131010
GO:0005515protein binding7 (41.18%)1010131000
GO:0043167ion binding6 (35.29%)1000031010
GO:0043169cation binding5 (29.41%)1000021010
GO:0046872metal ion binding5 (29.41%)1000021010
GO:0046914transition metal ion binding5 (29.41%)1000021010
GO:0008270zinc ion binding5 (29.41%)1000021010
GO:0016881acid-amino acid ligase activity4 (23.53%)1000021000
GO:0016787hydrolase activity4 (23.53%)0020200000
GO:0016874ligase activity4 (23.53%)1000021000
GO:0016879ligase activity, forming carbon-nitrogen bonds4 (23.53%)1000021000
GO:0019787small conjugating protein ligase activity4 (23.53%)1000021000
GO:0004842ubiquitin-protein ligase activity4 (23.53%)1000021000
GO:1901363heterocyclic compound binding3 (17.65%)0011010000
GO:0016788hydrolase activity, acting on ester bonds3 (17.65%)0010200000
GO:0097159organic cyclic compound binding3 (17.65%)0011010000
GO:0034450ubiquitin-ubiquitin ligase activity3 (17.65%)1000011000
GO:0052689carboxylic ester hydrolase activity2 (11.76%)0000200000
GO:0016301kinase activity2 (11.76%)0000020000
GO:0016298lipase activity2 (11.76%)0000200000
GO:1901265nucleoside phosphate binding2 (11.76%)0001010000
GO:0000166nucleotide binding2 (11.76%)0001010000
GO:0036094small molecule binding2 (11.76%)0001010000
GO:0016740transferase activity2 (11.76%)0000020000
GO:0016772transferase activity, transferring phosphorus-containing groups2 (11.76%)0000020000
GO:0004806triglyceride lipase activity2 (11.76%)0000200000
GO:0005524ATP binding1 (5.88%)0000010000
GO:0003677DNA binding1 (5.88%)0010000000
GO:0004707MAP kinase activity1 (5.88%)0000010000
GO:0051287NAD binding1 (5.88%)0001000000
GO:0030554adenyl nucleotide binding1 (5.88%)0000010000
GO:0032559adenyl ribonucleotide binding1 (5.88%)0000010000
GO:0043168anion binding1 (5.88%)0000010000
GO:0097367carbohydrate derivative binding1 (5.88%)0000010000
GO:0050662coenzyme binding1 (5.88%)0001000000
GO:0048037cofactor binding1 (5.88%)0001000000
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity1 (5.88%)0001000000
GO:0060089molecular transducer activity1 (5.88%)0000010000
GO:0003676nucleic acid binding1 (5.88%)0010000000
GO:0001071nucleic acid binding transcription factor activity1 (5.88%)0010000000
GO:0001882nucleoside binding1 (5.88%)0000010000
GO:0016491oxidoreductase activity1 (5.88%)0001000000
GO:0016614oxidoreductase activity, acting on CH-OH group of donors1 (5.88%)0001000000
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1 (5.88%)0001000000
GO:0016791phosphatase activity1 (5.88%)0010000000
GO:0004721phosphoprotein phosphatase activity1 (5.88%)0010000000
GO:0042578phosphoric ester hydrolase activity1 (5.88%)0010000000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (5.88%)0000010000
GO:0046983protein dimerization activity1 (5.88%)0000100000
GO:0004672protein kinase activity1 (5.88%)0000010000
GO:0004674protein serine/threonine kinase activity1 (5.88%)0000010000
GO:0004722protein serine/threonine phosphatase activity1 (5.88%)0010000000
GO:0001883purine nucleoside binding1 (5.88%)0000010000
GO:0017076purine nucleotide binding1 (5.88%)0000010000
GO:0032550purine ribonucleoside binding1 (5.88%)0000010000
GO:0035639purine ribonucleoside triphosphate binding1 (5.88%)0000010000
GO:0032555purine ribonucleotide binding1 (5.88%)0000010000
GO:0004872receptor activity1 (5.88%)0000010000
GO:0005057receptor signaling protein activity1 (5.88%)0000010000
GO:0004702receptor signaling protein serine/threonine kinase activity1 (5.88%)0000010000
GO:0032549ribonucleoside binding1 (5.88%)0000010000
GO:0032553ribonucleotide binding1 (5.88%)0000010000
GO:0043565sequence-specific DNA binding1 (5.88%)0010000000
GO:0003700sequence-specific DNA binding transcription factor activity1 (5.88%)0010000000
GO:0004871signal transducer activity1 (5.88%)0000010000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process13 (76.47%)1031331010
GO:0071704organic substance metabolic process11 (64.71%)1021331000
GO:0044238primary metabolic process11 (64.71%)1021331000
GO:0044237cellular metabolic process10 (58.82%)1021131010
GO:0009987cellular process10 (58.82%)1021131010
GO:0044699single-organism process10 (58.82%)1021221010
GO:0050896response to stimulus9 (52.94%)1020131010
GO:0065007biological regulation8 (47.06%)1020121010
GO:0044260cellular macromolecule metabolic process8 (47.06%)1020131000
GO:0043170macromolecule metabolic process8 (47.06%)1020131000
GO:0050789regulation of biological process8 (47.06%)1020121010
GO:0050794regulation of cellular process8 (47.06%)1020121010
GO:0044267cellular protein metabolic process6 (35.29%)1010031000
GO:0006464cellular protein modification process6 (35.29%)1010031000
GO:0043412macromolecule modification6 (35.29%)1010031000
GO:0019538protein metabolic process6 (35.29%)1010031000
GO:0036211protein modification process6 (35.29%)1010031000
GO:0044763single-organism cellular process6 (35.29%)1020021000
GO:0009056catabolic process5 (29.41%)1001011010
GO:0051704multi-organism process5 (29.41%)1000031000
GO:0009607response to biotic stimulus5 (29.41%)1000031000
GO:0042221response to chemical5 (29.41%)0020110010
GO:0009719response to endogenous stimulus5 (29.41%)0020110010
GO:0009725response to hormone5 (29.41%)0020110010
GO:0010033response to organic substance5 (29.41%)0020110010
GO:0051707response to other organism5 (29.41%)1000031000
GO:0006950response to stress5 (29.41%)0020020010
GO:0007049cell cycle4 (23.53%)1000021000
GO:0044248cellular catabolic process4 (23.53%)1000011010
GO:1901575organic substance catabolic process4 (23.53%)1001011000
GO:0032446protein modification by small protein conjugation4 (23.53%)1000021000
GO:0070647protein modification by small protein conjugation or removal4 (23.53%)1000021000
GO:0016567protein ubiquitination4 (23.53%)1000021000
GO:0031323regulation of cellular metabolic process4 (23.53%)0020100010
GO:0019222regulation of metabolic process4 (23.53%)0020100010
GO:0009628response to abiotic stimulus4 (23.53%)0020010010
GO:0009409response to cold4 (23.53%)0020010010
GO:0006970response to osmotic stress4 (23.53%)0020010010
GO:1901700response to oxygen-containing compound4 (23.53%)0020010010
GO:0009651response to salt stress4 (23.53%)0020010010
GO:0009266response to temperature stimulus4 (23.53%)0020010010
GO:0032774RNA biosynthetic process3 (17.65%)0020100000
GO:0016070RNA metabolic process3 (17.65%)0020100000
GO:0019438aromatic compound biosynthetic process3 (17.65%)0020100000
GO:0009058biosynthetic process3 (17.65%)0020100000
GO:0006725cellular aromatic compound metabolic process3 (17.65%)0020100000
GO:0044249cellular biosynthetic process3 (17.65%)0020100000
GO:0034645cellular macromolecule biosynthetic process3 (17.65%)0020100000
GO:0044265cellular macromolecule catabolic process3 (17.65%)1000011000
GO:0044271cellular nitrogen compound biosynthetic process3 (17.65%)0020100000
GO:0034641cellular nitrogen compound metabolic process3 (17.65%)0020100000
GO:0060154cellular process regulating host cell cycle in response to virus3 (17.65%)1000011000
GO:0044257cellular protein catabolic process3 (17.65%)1000011000
GO:0051716cellular response to stimulus3 (17.65%)0020010000
GO:0032502developmental process3 (17.65%)0010010010
GO:0010467gene expression3 (17.65%)0020100000
GO:0018130heterocycle biosynthetic process3 (17.65%)0020100000
GO:0046483heterocycle metabolic process3 (17.65%)0020100000
GO:0009059macromolecule biosynthetic process3 (17.65%)0020100000
GO:0009057macromolecule catabolic process3 (17.65%)1000011000
GO:0043632modification-dependent macromolecule catabolic process3 (17.65%)1000011000
GO:0019941modification-dependent protein catabolic process3 (17.65%)1000011000
GO:0006807nitrogen compound metabolic process3 (17.65%)0020100000
GO:0090304nucleic acid metabolic process3 (17.65%)0020100000
GO:0034654nucleobase-containing compound biosynthetic process3 (17.65%)0020100000
GO:0006139nucleobase-containing compound metabolic process3 (17.65%)0020100000
GO:1901362organic cyclic compound biosynthetic process3 (17.65%)0020100000
GO:1901360organic cyclic compound metabolic process3 (17.65%)0020100000
GO:1901576organic substance biosynthetic process3 (17.65%)0020100000
GO:0006796phosphate-containing compound metabolic process3 (17.65%)0011010000
GO:0006793phosphorus metabolic process3 (17.65%)0011010000
GO:0030163protein catabolic process3 (17.65%)1000011000
GO:0006508proteolysis3 (17.65%)1000011000
GO:0051603proteolysis involved in cellular protein catabolic process3 (17.65%)1000011000
GO:2001141regulation of RNA biosynthetic process3 (17.65%)0020100000
GO:0051252regulation of RNA metabolic process3 (17.65%)0020100000
GO:0009889regulation of biosynthetic process3 (17.65%)0020100000
GO:0051726regulation of cell cycle3 (17.65%)1000011000
GO:0031326regulation of cellular biosynthetic process3 (17.65%)0020100000
GO:2000112regulation of cellular macromolecule biosynthetic process3 (17.65%)0020100000
GO:0010468regulation of gene expression3 (17.65%)0020100000
GO:0010556regulation of macromolecule biosynthetic process3 (17.65%)0020100000
GO:0060255regulation of macromolecule metabolic process3 (17.65%)0020100000
GO:0051171regulation of nitrogen compound metabolic process3 (17.65%)0020100000
GO:0019219regulation of nucleobase-containing compound metabolic process3 (17.65%)0020100000
GO:0080090regulation of primary metabolic process3 (17.65%)0020100000
GO:0006355regulation of transcription, DNA-dependent3 (17.65%)0020100000
GO:0009737response to abscisic acid3 (17.65%)0010010010
GO:0097305response to alcohol3 (17.65%)0010010010
GO:0010035response to inorganic substance3 (17.65%)0020000010
GO:0033993response to lipid3 (17.65%)0010010010
GO:0009615response to virus3 (17.65%)1000011000
GO:0009415response to water3 (17.65%)0020000010
GO:0009414response to water deprivation3 (17.65%)0020000010
GO:0044767single-organism developmental process3 (17.65%)0010010010
GO:0044710single-organism metabolic process3 (17.65%)0001200000
GO:0006351transcription, DNA-templated3 (17.65%)0020100000
GO:0006511ubiquitin-dependent protein catabolic process3 (17.65%)1000011000
GO:0048856anatomical structure development2 (11.76%)0000010010
GO:0007154cell communication2 (11.76%)0010010000
GO:0071214cellular response to abiotic stimulus2 (11.76%)0020000000
GO:0070887cellular response to chemical stimulus2 (11.76%)0010010000
GO:0071495cellular response to endogenous stimulus2 (11.76%)0010010000
GO:0032870cellular response to hormone stimulus2 (11.76%)0010010000
GO:0071310cellular response to organic substance2 (11.76%)0010010000
GO:0071470cellular response to osmotic stress2 (11.76%)0020000000
GO:0071472cellular response to salt stress2 (11.76%)0020000000
GO:0033554cellular response to stress2 (11.76%)0020000000
GO:0006952defense response2 (11.76%)0000020000
GO:0098542defense response to other organism2 (11.76%)0000020000
GO:0048229gametophyte development2 (11.76%)0000010010
GO:0009755hormone-mediated signaling pathway2 (11.76%)0010010000
GO:0006972hyperosmotic response2 (11.76%)0000010010
GO:0006629lipid metabolic process2 (11.76%)0000200000
GO:0007275multicellular organismal development2 (11.76%)0000010010
GO:0032501multicellular organismal process2 (11.76%)0000010010
GO:0009555pollen development2 (11.76%)0000010010
GO:0000003reproduction2 (11.76%)0000010010
GO:0009611response to wounding2 (11.76%)0010010000
GO:0007165signal transduction2 (11.76%)0010010000
GO:0023052signaling2 (11.76%)0010010000
GO:0044700single organism signaling2 (11.76%)0010010000
GO:0044707single-multicellular organism process2 (11.76%)0000010010
GO:0052646alditol phosphate metabolic process1 (5.88%)0001000000
GO:0006914autophagy1 (5.88%)0000000010
GO:1901136carbohydrate derivative catabolic process1 (5.88%)0001000000
GO:1901135carbohydrate derivative metabolic process1 (5.88%)0001000000
GO:0005975carbohydrate metabolic process1 (5.88%)0001000000
GO:0022402cell cycle process1 (5.88%)0000010000
GO:0030154cell differentiation1 (5.88%)0010000000
GO:0051301cell division1 (5.88%)0000010000
GO:0016043cellular component organization1 (5.88%)0000010000
GO:0071840cellular component organization or biogenesis1 (5.88%)0000010000
GO:0048869cellular developmental process1 (5.88%)0010000000
GO:0048610cellular process involved in reproduction1 (5.88%)0000010000
GO:0071368cellular response to cytokinin stimulus1 (5.88%)0010000000
GO:0071369cellular response to ethylene stimulus1 (5.88%)0010000000
GO:0071395cellular response to jasmonic acid stimulus1 (5.88%)0000010000
GO:0071482cellular response to light stimulus1 (5.88%)0010000000
GO:0071407cellular response to organic cyclic compound1 (5.88%)0000010000
GO:1901701cellular response to oxygen-containing compound1 (5.88%)0000010000
GO:0071478cellular response to radiation1 (5.88%)0010000000
GO:0071489cellular response to red or far red light1 (5.88%)0010000000
GO:0071446cellular response to salicylic acid stimulus1 (5.88%)0000010000
GO:0030865cortical cytoskeleton organization1 (5.88%)0000010000
GO:0043622cortical microtubule organization1 (5.88%)0000010000
GO:0000910cytokinesis1 (5.88%)0000010000
GO:0009736cytokinin-activated signaling pathway1 (5.88%)0010000000
GO:0031122cytoplasmic microtubule organization1 (5.88%)0000010000
GO:0007010cytoskeleton organization1 (5.88%)0000010000
GO:0042742defense response to bacterium1 (5.88%)0000010000
GO:0009814defense response, incompatible interaction1 (5.88%)0000010000
GO:0016311dephosphorylation1 (5.88%)0010000000
GO:0003006developmental process involved in reproduction1 (5.88%)0000000010
GO:0009873ethylene mediated signaling pathway1 (5.88%)0010000000
GO:0009908flower development1 (5.88%)0000000010
GO:0046168glycerol-3-phosphate catabolic process1 (5.88%)0001000000
GO:0006072glycerol-3-phosphate metabolic process1 (5.88%)0001000000
GO:0042538hyperosmotic salinity response1 (5.88%)0000000010
GO:0006971hypotonic response1 (5.88%)0000010000
GO:0042539hypotonic salinity response1 (5.88%)0000010000
GO:0006955immune response1 (5.88%)0000010000
GO:0002376immune system process1 (5.88%)0000010000
GO:0045087innate immune response1 (5.88%)0000010000
GO:0009861jasmonic acid and ethylene-dependent systemic resistance1 (5.88%)0000010000
GO:0009868jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway1 (5.88%)0000010000
GO:0009867jasmonic acid mediated signaling pathway1 (5.88%)0000010000
GO:0043933macromolecular complex subunit organization1 (5.88%)0000010000
GO:0007112male meiosis cytokinesis1 (5.88%)0000010000
GO:0051321meiotic cell cycle1 (5.88%)0000010000
GO:0033206meiotic cytokinesis1 (5.88%)0000010000
GO:0000226microtubule cytoskeleton organization1 (5.88%)0000010000
GO:0007017microtubule-based process1 (5.88%)0000010000
GO:0010507negative regulation of autophagy1 (5.88%)0000000010
GO:0048519negative regulation of biological process1 (5.88%)0000000010
GO:0009895negative regulation of catabolic process1 (5.88%)0000000010
GO:0031330negative regulation of cellular catabolic process1 (5.88%)0000000010
GO:0031324negative regulation of cellular metabolic process1 (5.88%)0000000010
GO:0048523negative regulation of cellular process1 (5.88%)0000000010
GO:0009892negative regulation of metabolic process1 (5.88%)0000000010
GO:0006996organelle organization1 (5.88%)0000010000
GO:0046434organophosphate catabolic process1 (5.88%)0001000000
GO:0019637organophosphate metabolic process1 (5.88%)0001000000
GO:0055114oxidation-reduction process1 (5.88%)0001000000
GO:0000160phosphorelay signal transduction system1 (5.88%)0010000000
GO:0016310phosphorylation1 (5.88%)0000010000
GO:0009791post-embryonic development1 (5.88%)0000000010
GO:0051865protein autoubiquitination1 (5.88%)0000010000
GO:0071822protein complex subunit organization1 (5.88%)0000010000
GO:0006470protein dephosphorylation1 (5.88%)0010000000
GO:0006468protein phosphorylation1 (5.88%)0000010000
GO:0010017red or far-red light signaling pathway1 (5.88%)0010000000
GO:0043620regulation of DNA-dependent transcription in response to stress1 (5.88%)0010000000
GO:0010506regulation of autophagy1 (5.88%)0000000010
GO:0009894regulation of catabolic process1 (5.88%)0000000010
GO:0045595regulation of cell differentiation1 (5.88%)0010000000
GO:0031329regulation of cellular catabolic process1 (5.88%)0000000010
GO:0050793regulation of developmental process1 (5.88%)0010000000
GO:0006357regulation of transcription from RNA polymerase II promoter1 (5.88%)0010000000
GO:0061392regulation of transcription from RNA polymerase II promoter in response to osmotic stress1 (5.88%)0010000000
GO:0061416regulation of transcription from RNA polymerase II promoter in response to salt stress1 (5.88%)0010000000
GO:0043618regulation of transcription from RNA polymerase II promoter in response to stress1 (5.88%)0010000000
GO:0022414reproductive process1 (5.88%)0000000010
GO:0048608reproductive structure development1 (5.88%)0000000010
GO:0061458reproductive system development1 (5.88%)0000000010
GO:0009733response to auxin1 (5.88%)0000100000
GO:0009617response to bacterium1 (5.88%)0000010000
GO:0009735response to cytokinin1 (5.88%)0010000000
GO:0009723response to ethylene1 (5.88%)0010000000
GO:0009620response to fungus1 (5.88%)0000010000
GO:0009753response to jasmonic acid1 (5.88%)0000010000
GO:0032260response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance1 (5.88%)0000010000
GO:0009416response to light stimulus1 (5.88%)0010000000
GO:0014070response to organic cyclic compound1 (5.88%)0000010000
GO:0009314response to radiation1 (5.88%)0010000000
GO:0009639response to red or far red light1 (5.88%)0010000000
GO:0009751response to salicylic acid1 (5.88%)0000010000
GO:0009863salicylic acid mediated signaling pathway1 (5.88%)0000010000
GO:0048367shoot system development1 (5.88%)0000000010
GO:0044702single organism reproductive process1 (5.88%)0000000010
GO:0048731system development1 (5.88%)0000000010
GO:0009627systemic acquired resistance1 (5.88%)0000010000
GO:0009862systemic acquired resistance, salicylic acid mediated signaling pathway1 (5.88%)0000010000
GO:0006366transcription from RNA polymerase II promoter1 (5.88%)0010000000