PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_9
Name: AT5G04760
Description: N/A

#Associated genes: 704
#Associated MapMan terms: 175

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	98 (13.92%)	10	14	3	26	17	15	9	4
1	PS	86 (12.22%)	7	16	7	22	11	11	8	4
1.1	PS.lightreaction	86 (12.22%)	7	16	7	22	11	11	8	4
27.3	RNA.regulation of transcription	77 (10.94%)	8	12	2	17	15	12	7	4
29	protein	52 (7.39%)	4	3	0	21	5	5	10	4
1.1.1	PS.lightreaction.photosystem II	41 (5.82%)	4	8	4	11	6	2	5	1
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	31 (4.40%)	4	8	3	7	4	2	3	0
1.1.2	PS.lightreaction.photosystem I	31 (4.40%)	2	5	2	8	4	6	2	2
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	27 (3.84%)	2	5	2	6	3	5	2	2
21	redox	24 (3.41%)	3	3	2	9	0	3	4	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	22 (3.13%)	1	2	2	6	3	3	1	4
33	development	22 (3.13%)	3	2	3	6	3	2	2	1
29.5	protein.degradation	21 (2.98%)	1	2	0	8	1	2	5	2
34	transport	21 (2.98%)	2	0	1	5	2	3	6	2
33.99	development.unspecified	18 (2.56%)	3	1	2	5	2	2	2	1
30	signalling	17 (2.41%)	0	0	0	5	3	6	1	2
21.1	redox.thioredoxin	13 (1.85%)	1	2	1	4	0	2	3	0
27.3.99	RNA.regulation of transcription.unclassified	13 (1.85%)	1	2	0	2	3	4	1	0
29.4	protein.postranslational modification	13 (1.85%)	1	0	0	6	1	1	3	1
13	amino acid metabolism	11 (1.56%)	0	3	1	0	4	1	2	0
29.2	protein.synthesis	11 (1.56%)	1	1	0	3	3	1	1	1
29.2.3	protein.synthesis.initiation	11 (1.56%)	1	1	0	3	3	1	1	1
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	10 (1.42%)	0	0	1	4	2	0	2	1
11	lipid metabolism	10 (1.42%)	1	0	1	3	1	0	3	1
27.1	RNA.processing	10 (1.42%)	1	1	0	5	0	2	1	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	10 (1.42%)	1	1	1	2	2	1	2	0
27.4	RNA.RNA binding	10 (1.42%)	1	1	1	3	2	1	1	0
29.2.1.1.1.2.19	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19	10 (1.42%)	1	3	1	2	1	0	1	1
31	cell	10 (1.42%)	1	1	0	4	2	0	0	2
1.1.3	PS.lightreaction.cytochrome b6/f	9 (1.28%)	1	3	0	2	0	2	0	1
13.2	amino acid metabolism.degradation	9 (1.28%)	0	2	1	0	3	1	2	0
17	hormone metabolism	9 (1.28%)	1	0	1	3	1	1	2	0
29.5.5	protein.degradation.serine protease	9 (1.28%)	0	0	0	2	1	1	4	1
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	8 (1.14%)	0	2	0	2	1	0	1	2
30.2	signalling.receptor kinases	7 (0.99%)	0	0	0	2	1	3	0	1
13.2.4	amino acid metabolism.degradation.branched chain group	6 (0.85%)	0	2	1	0	1	1	1	0
13.2.4.4	amino acid metabolism.degradation.branched chain group.leucine	6 (0.85%)	0	2	1	0	1	1	1	0
16	secondary metabolism	6 (0.85%)	1	1	0	2	1	0	0	1
20	stress	6 (0.85%)	0	0	0	1	1	1	1	2
21.6	redox.dismutases and catalases	6 (0.85%)	2	1	0	1	0	1	1	0
26	misc	6 (0.85%)	0	1	1	0	0	2	1	1
27.1.19	RNA.processing.ribonucleases	6 (0.85%)	1	1	0	2	0	1	1	0
1.1.3.1	PS.lightreaction.cytochrome b6/f.iron sulfur subunit	5 (0.71%)	0	2	0	2	0	1	0	0
3	minor CHO metabolism	5 (0.71%)	1	0	0	2	0	1	1	0
3.2	minor CHO metabolism.trehalose	5 (0.71%)	1	0	0	2	0	1	1	0
11.1	lipid metabolism.FA synthesis and FA elongation	5 (0.71%)	1	0	1	1	1	0	1	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	5 (0.71%)	2	2	0	1	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	5 (0.71%)	1	0	0	0	2	1	0	1
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	5 (0.71%)	0	0	0	2	2	1	0	0
28	DNA	5 (0.71%)	1	0	0	3	0	1	0	0
29.2.1.1.1.1.13	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13	5 (0.71%)	1	2	0	2	0	0	0	0
29.4.1	protein.postranslational modification.kinase	5 (0.71%)	0	0	0	2	1	1	1	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	5 (0.71%)	0	0	0	2	1	1	1	0
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	5 (0.71%)	1	0	0	2	0	1	1	0
30.11	signalling.light	5 (0.71%)	0	0	0	2	1	1	1	0
30.3	signalling.calcium	5 (0.71%)	0	0	0	1	1	2	0	1
31.1	cell.organisation	5 (0.71%)	1	1	0	1	2	0	0	0
31.4	cell.vesicle transport	5 (0.71%)	0	0	0	3	0	0	0	2
1.1.2.1	PS.lightreaction.photosystem I.LHC-I	4 (0.57%)	0	0	0	2	1	1	0	0
11.1.8	lipid metabolism.FA synthesis and FA elongation.acyl coa ligase	4 (0.57%)	1	0	1	1	0	0	1	0
16.2	secondary metabolism.phenylpropanoids	4 (0.57%)	0	0	0	2	1	0	0	1
17.2	hormone metabolism.auxin	4 (0.57%)	1	0	0	1	1	0	1	0
20.2	stress.abiotic	4 (0.57%)	0	0	0	1	1	1	0	1
21.4	redox.glutaredoxins	4 (0.57%)	0	0	1	3	0	0	0	0
27.3.38	RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family	4 (0.57%)	0	0	0	2	1	0	1	0
27.3.64	RNA.regulation of transcription.PHOR1	4 (0.57%)	1	2	0	1	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	4 (0.57%)	0	0	1	1	0	0	1	1
29.8	protein.assembly and cofactor ligation	4 (0.57%)	0	0	0	2	0	1	1	0
30.2.17	signalling.receptor kinases.DUF 26	4 (0.57%)	0	0	0	2	0	2	0	0
34.12	transport.metal	4 (0.57%)	1	0	0	1	0	1	0	1
34.19	transport.Major Intrinsic Proteins	4 (0.57%)	0	0	1	0	0	0	3	0
34.8	transport.metabolite transporters at the envelope membrane	4 (0.57%)	0	0	0	0	1	1	2	0
11.9	lipid metabolism.lipid degradation	3 (0.43%)	0	0	0	0	0	0	2	1
12	N-metabolism	3 (0.43%)	1	0	0	1	0	0	0	1
12.2	N-metabolism.ammonia metabolism	3 (0.43%)	1	0	0	1	0	0	0	1
12.2.2	N-metabolism.ammonia metabolism.glutamine synthetase	3 (0.43%)	1	0	0	1	0	0	0	1
13.2.3	amino acid metabolism.degradation.aspartate family	3 (0.43%)	0	0	0	0	2	0	1	0
13.2.3.5	amino acid metabolism.degradation.aspartate family.lysine	3 (0.43%)	0	0	0	0	2	0	1	0
15	metal handling	3 (0.43%)	0	1	0	2	0	0	0	0
17.1	hormone metabolism.abscisic acid	3 (0.43%)	0	0	1	2	0	0	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	3 (0.43%)	0	0	1	2	0	0	0	0
20.2.1	stress.abiotic.heat	3 (0.43%)	0	0	0	0	1	1	0	1
26.28	misc.GDSL-motif lipase	3 (0.43%)	0	0	1	0	0	1	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (0.43%)	0	0	0	1	0	2	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	3 (0.43%)	1	0	0	1	0	1	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (0.43%)	0	0	0	0	2	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	3 (0.43%)	0	0	0	0	1	1	0	1
33.30	development.multitarget	3 (0.43%)	0	1	1	1	0	0	0	0
33.30.1	development.multitarget.target of rapamycin	3 (0.43%)	0	1	1	1	0	0	0	0
34.99	transport.misc	3 (0.43%)	0	0	0	1	0	1	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.28%)	0	0	0	0	1	0	1	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	2 (0.28%)	0	0	1	0	0	1	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	2 (0.28%)	0	0	1	0	0	1	0	0
9	mitochondrial electron transport / ATP synthesis	2 (0.28%)	0	0	0	0	1	0	1	0
11.2	lipid metabolism.FA desaturation	2 (0.28%)	0	0	0	2	0	0	0	0
11.2.1	lipid metabolism.FA desaturation.desaturase	2 (0.28%)	0	0	0	2	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	2 (0.28%)	0	0	0	0	0	0	2	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	2 (0.28%)	0	0	0	0	0	0	2	0
13.1	amino acid metabolism.synthesis	2 (0.28%)	0	1	0	0	1	0	0	0
13.2.3.5.1	mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase	2 (0.28%)	0	0	0	0	2	0	0	0
15.2	metal handling.binding, chelation and storage	2 (0.28%)	0	0	0	2	0	0	0	0
16.1	secondary metabolism.isoprenoids	2 (0.28%)	1	1	0	0	0	0	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	2 (0.28%)	1	1	0	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	2 (0.28%)	0	0	0	1	0	0	0	1
17.2.2	hormone metabolism.auxin.signal transduction	2 (0.28%)	0	0	0	1	1	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (0.28%)	1	0	0	0	0	0	1	0
17.4	hormone metabolism.cytokinin	2 (0.28%)	0	0	0	0	0	1	1	0
17.4.2	hormone metabolism.cytokinin.signal transduction	2 (0.28%)	0	0	0	0	0	1	1	0
20.1	stress.biotic	2 (0.28%)	0	0	0	0	0	0	1	1
27.1.1	RNA.processing.splicing	2 (0.28%)	0	0	0	2	0	0	0	0
27.1.2	RNA.processing.RNA helicase	2 (0.28%)	0	0	0	1	0	1	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (0.28%)	0	0	0	0	0	1	1	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (0.28%)	0	1	0	0	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.28%)	0	1	0	1	0	0	0	0
28.2	DNA.repair	2 (0.28%)	1	0	0	0	0	1	0	0
28.99	DNA.unspecified	2 (0.28%)	0	0	0	2	0	0	0	0
29.2.1.1.3.2.35	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35	2 (0.28%)	0	0	0	1	0	1	0	0
29.2.1.99.2.34	protein.synthesis.ribosomal protein.unknown.large subunit.L34	2 (0.28%)	0	0	0	0	1	0	0	1
29.5.3	protein.degradation.cysteine protease	2 (0.28%)	1	1	0	0	0	0	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	2 (0.28%)	0	0	0	0	0	0	2	0
34.19.2	transport.Major Intrinsic Proteins.TIP	2 (0.28%)	0	0	1	0	0	0	1	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	2 (0.28%)	0	0	0	0	1	0	1	0
29.6	protein.folding	2 (0.28%)	0	0	0	2	0	0	0	0
34.7	transport.phosphate	2 (0.28%)	0	0	0	2	0	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (0.28%)	1	0	0	1	0	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	2 (0.28%)	0	0	0	0	1	0	1	0
1.1.6	PS.lightreaction.NADH DH	1 (0.14%)	0	0	0	1	0	0	0	0
10	cell wall	1 (0.14%)	0	0	0	0	0	0	0	1
10.6	cell wall.degradation	1 (0.14%)	0	0	0	0	0	0	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.14%)	0	0	0	0	0	0	0	1
11.1.3	lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase	1 (0.14%)	0	0	0	0	1	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.14%)	0	0	0	0	0	0	0	1
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase	1 (0.14%)	0	0	0	0	0	0	0	1
13.1.1	amino acid metabolism.synthesis.central amino acid metabolism	1 (0.14%)	0	1	0	0	0	0	0	0
13.1.1.3	amino acid metabolism.synthesis.central amino acid metabolism.alanine	1 (0.14%)	0	1	0	0	0	0	0	0
13.1.1.3.1	amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase	1 (0.14%)	0	1	0	0	0	0	0	0
13.1.5	amino acid metabolism.synthesis.serine-glycine-cysteine group	1 (0.14%)	0	0	0	0	1	0	0	0
13.1.5.3	amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine	1 (0.14%)	0	0	0	0	1	0	0	0
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	1 (0.14%)	0	0	0	0	0	0	0	1
16.2.1.3	secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL	1 (0.14%)	0	0	0	1	0	0	0	0
19	tetrapyrrole synthesis	1 (0.14%)	1	0	0	0	0	0	0	0
19.10	tetrapyrrole synthesis.magnesium chelatase	1 (0.14%)	1	0	0	0	0	0	0	0
20.2.4	stress.abiotic.touch/wounding	1 (0.14%)	0	0	0	1	0	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.14%)	0	0	0	1	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.14%)	0	0	0	1	0	0	0	0
22	polyamine metabolism	1 (0.14%)	0	0	0	0	0	0	0	1
22.1	polyamine metabolism.synthesis	1 (0.14%)	0	0	0	0	0	0	0	1
22.1.6	polyamine metabolism.synthesis.spermidine synthase	1 (0.14%)	0	0	0	0	0	0	0	1
26.12	misc.peroxidases	1 (0.14%)	0	0	0	0	0	1	0	0
26.18	misc.invertase/pectin methylesterase inhibitor family protein	1 (0.14%)	0	1	0	0	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.14%)	0	0	0	0	0	0	1	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	1 (0.14%)	0	0	0	0	0	0	1	0
27.2	RNA.transcription	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	1 (0.14%)	1	0	0	0	0	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.14%)	0	0	0	0	1	0	0	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.14%)	0	0	0	1	0	0	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.14%)	0	0	0	1	0	0	0	0
29.2.1.1.1.1.31	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S31	1 (0.14%)	0	0	1	0	0	0	0	0
29.2.1.1.1.1.83	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3	1 (0.14%)	0	0	0	0	0	0	1	0
29.2.1.1.1.2.17	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17	1 (0.14%)	1	0	0	0	0	0	0	0
29.2.1.1.1.2.34	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34	1 (0.14%)	0	0	0	0	0	0	1	0
29.2.1.2.2.23	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23	1 (0.14%)	0	0	0	0	1	0	0	0
29.3	protein.targeting	1 (0.14%)	1	0	0	0	0	0	0	0
29.3.3	protein.targeting.chloroplast	1 (0.14%)	1	0	0	0	0	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.14%)	0	0	0	1	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.14%)	1	0	0	0	0	0	0	0
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (0.14%)	1	0	0	0	0	0	0	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	1 (0.14%)	0	0	0	1	0	0	0	0
29.5.4	protein.degradation.aspartate protease	1 (0.14%)	0	0	0	1	0	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.14%)	0	0	0	1	0	0	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.14%)	0	0	0	0	0	0	1	0
33.1	development.storage proteins	1 (0.14%)	0	0	0	0	1	0	0	0
34.13	transport.peptides and oligopeptides	1 (0.14%)	0	0	0	0	0	0	0	1
34.3	transport.amino acids	1 (0.14%)	0	0	0	0	1	0	0	0