PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_63
Name: ARR10
Description: N/A

#Associated genes: 393
#Associated MapMan terms: 143

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	78 (19.85%)	8	12	3	29	10	2	5	9
27.3	RNA.regulation of transcription	71 (18.07%)	8	10	3	25	10	2	5	8
29	protein	27 (6.87%)	0	6	5	7	2	2	0	5
31	cell	21 (5.34%)	1	1	1	5	4	1	2	6
28	DNA	17 (4.33%)	1	2	2	4	5	0	2	1
28.1	DNA.synthesis/chromatin structure	16 (4.07%)	1	2	2	4	4	0	2	1
27.3.99	RNA.regulation of transcription.unclassified	14 (3.56%)	2	1	1	5	2	1	0	2
34	transport	14 (3.56%)	1	1	1	5	4	1	0	1
30	signalling	11 (2.80%)	0	2	2	3	1	0	1	2
31.1	cell.organisation	11 (2.80%)	1	0	1	4	2	1	0	2
33	development	11 (2.80%)	2	0	1	2	4	0	1	1
29.4	protein.postranslational modification	10 (2.54%)	0	4	2	2	1	0	0	1
26	misc	9 (2.29%)	0	2	2	1	2	0	1	1
29.3	protein.targeting	9 (2.29%)	0	1	2	3	0	1	0	2
33.99	development.unspecified	8 (2.04%)	2	0	0	2	2	0	1	1
8	TCA / org transformation	6 (1.53%)	1	0	2	0	1	1	0	1
17	hormone metabolism	6 (1.53%)	0	0	0	4	1	0	0	1
23	nucleotide metabolism	6 (1.53%)	0	3	0	2	0	0	0	1
23.2	nucleotide metabolism.degradation	6 (1.53%)	0	3	0	2	0	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	6 (1.53%)	0	1	0	3	1	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	6 (1.53%)	0	0	0	0	2	1	1	2
27.4	RNA.RNA binding	6 (1.53%)	0	2	0	4	0	0	0	0
29.5	protein.degradation	6 (1.53%)	0	1	1	1	1	0	0	2
30.3	signalling.calcium	6 (1.53%)	0	2	2	2	0	0	0	0
31.4	cell.vesicle transport	6 (1.53%)	0	1	0	0	2	0	1	2
34.99	transport.misc	6 (1.53%)	1	0	1	2	1	1	0	0
10	cell wall	5 (1.27%)	1	0	1	0	1	0	1	1
10.6	cell wall.degradation	5 (1.27%)	1	0	1	0	1	0	1	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	5 (1.27%)	1	0	1	0	1	0	1	1
28.1.3	DNA.synthesis/chromatin structure.histone	5 (1.27%)	0	1	1	0	2	0	1	0
29.3.1	protein.targeting.nucleus	5 (1.27%)	0	0	1	3	0	0	0	1
8.2	TCA / org transformation.other organic acid transformations	5 (1.27%)	1	0	2	0	1	1	0	0
8.2.11	TCA / org transformation.other organic acid transformatons.atp-citrate lyase	5 (1.27%)	1	0	2	0	1	1	0	0
2	major CHO metabolism	4 (1.02%)	2	0	0	1	0	0	1	0
9	mitochondrial electron transport / ATP synthesis	4 (1.02%)	0	0	0	3	0	0	0	1
27.3.5	RNA.regulation of transcription.ARR	4 (1.02%)	0	0	0	2	2	0	0	0
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	4 (1.02%)	1	2	0	0	0	0	1	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	4 (1.02%)	0	1	0	0	2	0	0	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	4 (1.02%)	0	0	0	0	2	1	0	1
29.5.9	protein.degradation.AAA type	4 (1.02%)	0	1	1	0	1	0	0	1
2.2	major CHO metabolism.degradation	3 (0.76%)	1	0	0	1	0	0	1	0
12.2	N-metabolism.ammonia metabolism	3 (0.76%)	0	0	0	1	1	0	0	1
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	3 (0.76%)	0	0	0	1	1	0	0	1
17.2	hormone metabolism.auxin	3 (0.76%)	0	0	0	1	1	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	3 (0.76%)	0	0	0	1	1	0	0	1
2.2.2	major CHO metabolism.degradation.starch	3 (0.76%)	1	0	0	1	0	0	1	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (0.76%)	1	0	0	1	0	0	1	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (0.76%)	1	0	0	1	0	0	1	0
11	lipid metabolism	3 (0.76%)	0	1	1	1	0	0	0	0
12	N-metabolism	3 (0.76%)	0	0	0	1	1	0	0	1
22	polyamine metabolism	3 (0.76%)	0	1	1	0	0	0	0	1
22.1	polyamine metabolism.synthesis	3 (0.76%)	0	1	1	0	0	0	0	1
22.1.3	polyamine metabolism.synthesis.arginine decarboxylase	3 (0.76%)	0	1	1	0	0	0	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	3 (0.76%)	0	0	0	0	0	0	2	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	3 (0.76%)	0	0	0	2	0	0	1	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	3 (0.76%)	0	0	0	2	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	3 (0.76%)	1	2	0	0	0	0	0	0
31.3	cell.cycle	3 (0.76%)	0	0	0	0	0	0	1	2
34.2	transport.sugars	3 (0.76%)	0	1	0	0	2	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	3 (0.76%)	0	0	0	2	0	0	0	1
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	2 (0.51%)	0	0	0	1	0	0	0	1
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	2 (0.51%)	0	0	0	2	0	0	0	0
15	metal handling	2 (0.51%)	0	1	0	1	0	0	0	0
15.2	metal handling.binding, chelation and storage	2 (0.51%)	0	1	0	1	0	0	0	0
17.8	hormone metabolism.salicylic acid	2 (0.51%)	0	0	0	2	0	0	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	2 (0.51%)	0	0	0	2	0	0	0	0
20	stress	2 (0.51%)	0	1	0	0	0	0	1	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.51%)	0	1	0	0	1	0	0	0
26.27	misc.calcineurin-like phosphoesterase family protein	2 (0.51%)	0	0	0	0	0	0	1	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.51%)	1	1	0	0	0	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.51%)	0	0	0	2	0	0	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.51%)	0	0	0	2	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.51%)	2	0	0	0	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.51%)	0	0	0	2	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (0.51%)	0	0	1	0	1	0	0	0
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	2 (0.51%)	0	0	0	0	1	0	1	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	2 (0.51%)	0	0	0	0	1	0	1	0
29.3.2	protein.targeting.mitochondria	2 (0.51%)	0	0	1	0	0	1	0	0
29.3.4	protein.targeting.secretory pathway	2 (0.51%)	0	1	0	0	0	0	0	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	2 (0.51%)	0	1	0	0	0	0	0	1
30.11	signalling.light	2 (0.51%)	0	0	0	1	1	0	0	0
33.2	development.late embryogenesis abundant	2 (0.51%)	0	0	1	0	1	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	2 (0.51%)	0	0	0	1	0	0	0	1
11.10	lipid metabolism.glycolipid synthesis	1 (0.25%)	0	0	1	0	0	0	0	0
11.10.1	lipid metabolism.glycolipid synthesis.MGDG synthase	1 (0.25%)	0	0	1	0	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.25%)	0	0	0	1	0	0	0	0
11.8.3	lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase	1 (0.25%)	0	0	0	1	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.25%)	0	1	0	0	0	0	0	0
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	1 (0.25%)	0	1	0	0	0	0	0	0
11.9.4.2	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH	1 (0.25%)	0	1	0	0	0	0	0	0
13	amino acid metabolism	1 (0.25%)	0	0	1	0	0	0	0	0
13.2	amino acid metabolism.degradation	1 (0.25%)	0	0	1	0	0	0	0	0
13.2.2	amino acid metabolism.degradation.glutamate family	1 (0.25%)	0	0	1	0	0	0	0	0
13.2.2.3	amino acid metabolism.degradation.glutamate family.arginine	1 (0.25%)	0	0	1	0	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.25%)	0	0	0	1	0	0	0	0
17.4.2	hormone metabolism.cytokinin.signal transduction	1 (0.25%)	0	0	0	1	0	0	0	0
2.1	major CHO metabolism.synthesis	1 (0.25%)	1	0	0	0	0	0	0	0
2.1.1	major CHO metabolism.synthesis.sucrose	1 (0.25%)	1	0	0	0	0	0	0	0
2.1.1.3	major CHO metabolism.synthesis.sucrose.FBPase	1 (0.25%)	1	0	0	0	0	0	0	0
20.1	stress.biotic	1 (0.25%)	0	0	0	0	0	0	1	0
20.2	stress.abiotic	1 (0.25%)	0	1	0	0	0	0	0	0
20.2.4	stress.abiotic.touch/wounding	1 (0.25%)	0	1	0	0	0	0	0	0
25	C1-metabolism	1 (0.25%)	0	0	0	0	1	0	0	0
25.7	C1-metabolism.GTP cyclohydrolase I	1 (0.25%)	0	0	0	0	1	0	0	0
26.10	misc.cytochrome P450	1 (0.25%)	0	0	1	0	0	0	0	0
26.13	misc.acid and other phosphatases	1 (0.25%)	0	0	0	1	0	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.25%)	0	0	1	0	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.25%)	0	0	0	0	1	0	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	1 (0.25%)	0	0	0	0	1	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.25%)	0	1	0	0	0	0	0	0
27.1	RNA.processing	1 (0.25%)	0	0	0	0	0	0	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.25%)	0	0	0	0	0	0	0	1
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.25%)	0	1	0	0	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.25%)	1	0	0	0	0	0	0	0
27.3.36	RNA.regulation of transcription.Argonaute	1 (0.25%)	0	0	0	0	1	0	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.25%)	0	0	0	1	0	0	0	0
27.3.54	RNA.regulation of transcription.Histone acetyltransferases	1 (0.25%)	0	1	0	0	0	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.25%)	0	1	0	0	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.25%)	0	0	0	1	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.25%)	0	0	1	0	0	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.25%)	0	0	0	0	1	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.25%)	0	0	0	0	1	0	0	0
28.99	DNA.unspecified	1 (0.25%)	0	0	0	0	1	0	0	0
29.2	protein.synthesis	1 (0.25%)	0	0	0	1	0	0	0	0
29.2.1.1.2.1.3	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3	1 (0.25%)	0	0	0	0	0	0	1	0
29.2.1.2.1.27	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27	1 (0.25%)	0	0	1	0	0	0	0	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.25%)	0	0	1	0	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.25%)	0	0	0	1	0	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.25%)	0	0	0	0	0	0	0	1
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.25%)	0	0	0	0	0	0	0	1
29.5.2	protein.degradation.autophagy	1 (0.25%)	0	0	0	1	0	0	0	0
8.1	TCA / org transformation.TCA	1 (0.25%)	0	0	0	0	0	0	0	1
29.7	protein.glycosylation	1 (0.25%)	0	0	0	0	0	1	0	0
29.7.4	protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase	1 (0.25%)	0	0	0	0	0	1	0	0
30.4	signalling.phosphinositides	1 (0.25%)	0	0	0	0	0	0	0	1
30.5	signalling.G-proteins	1 (0.25%)	0	0	0	0	0	0	1	0
30.99	signalling.unspecified	1 (0.25%)	0	0	0	0	0	0	0	1
31.2	cell.division	1 (0.25%)	0	0	0	1	0	0	0	0
33.1	development.storage proteins	1 (0.25%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.25%)	0	0	0	0	1	0	0	0
34.11	transport.NDP-sugars at the ER	1 (0.25%)	0	0	0	1	0	0	0	0
8.1.1	TCA / org transformation.TCA.pyruvate DH	1 (0.25%)	0	0	0	0	0	0	0	1
8.1.1.2	TCA / org transformation.TCA.pyruvate DH.E2	1 (0.25%)	0	0	0	0	0	0	0	1