PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_421
Name: GLK1
Description: N/A

#Associated genes: 231
#Associated MapMan terms: 124

Show species without binding site experiments

Click table-header(s) to enable sorting

MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	43 (18.61%)	1	4	3	13	9	4	5	4
27.3	RNA.regulation of transcription	32 (13.85%)	1	3	3	11	9	1	2	2
29	protein	24 (10.39%)	2	2	0	6	4	4	2	4
29.4	protein.postranslational modification	14 (6.06%)	1	0	0	5	2	2	1	3
34	transport	14 (6.06%)	1	1	2	3	4	0	1	2
30	signalling	10 (4.33%)	0	1	0	2	3	1	1	2
33	development	10 (4.33%)	1	1	1	2	1	2	1	1
33.99	development.unspecified	10 (4.33%)	1	1	1	2	1	2	1	1
27.1	RNA.processing	9 (3.90%)	0	1	0	2	0	3	2	1
27.3.99	RNA.regulation of transcription.unclassified	8 (3.46%)	0	0	1	3	2	0	1	1
31	cell	8 (3.46%)	0	0	0	4	1	0	1	2
29.5	protein.degradation	7 (3.03%)	1	0	0	1	1	2	1	1
27.3.50	RNA.regulation of transcription.General Transcription	6 (2.60%)	0	0	1	4	0	0	1	0
28	DNA	6 (2.60%)	1	1	0	0	4	0	0	0
3	minor CHO metabolism	4 (1.73%)	2	0	1	1	0	0	0	0
26	misc	4 (1.73%)	0	0	0	2	1	0	1	0
27.1.1	RNA.processing.splicing	4 (1.73%)	0	1	0	0	0	3	0	0
28.1	DNA.synthesis/chromatin structure	4 (1.73%)	0	1	0	0	3	0	0	0
31.4	cell.vesicle transport	4 (1.73%)	0	0	0	3	1	0	0	0
34.12	transport.metal	4 (1.73%)	0	0	1	0	1	0	1	1
2	major CHO metabolism	3 (1.30%)	2	0	0	1	0	0	0	0
19	tetrapyrrole synthesis	3 (1.30%)	0	0	0	3	0	0	0	0
19.10	tetrapyrrole synthesis.magnesium chelatase	3 (1.30%)	0	0	0	3	0	0	0	0
29.4.1	protein.postranslational modification.kinase	3 (1.30%)	0	0	0	2	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (1.30%)	0	0	0	2	0	0	0	1
29.5.5	protein.degradation.serine protease	3 (1.30%)	1	0	0	0	0	1	0	1
30.3	signalling.calcium	3 (1.30%)	0	1	0	0	1	0	1	0
31.3	cell.cycle	3 (1.30%)	0	0	0	0	0	0	1	2
1	PS	2 (0.87%)	0	0	1	1	0	0	0	0
1.1	PS.lightreaction	2 (0.87%)	0	0	1	1	0	0	0	0
2.2	major CHO metabolism.degradation	2 (0.87%)	1	0	0	1	0	0	0	0
2.2.2	major CHO metabolism.degradation.starch	2 (0.87%)	1	0	0	1	0	0	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	2 (0.87%)	1	0	0	1	0	0	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	2 (0.87%)	1	0	0	1	0	0	0	0
7	OPP	2 (0.87%)	0	1	0	0	0	0	0	1
10	cell wall	2 (0.87%)	0	0	0	1	0	0	0	1
11	lipid metabolism	2 (0.87%)	0	0	0	1	1	0	0	0
16	secondary metabolism	2 (0.87%)	0	0	0	2	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	2 (0.87%)	0	0	0	2	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	2 (0.87%)	0	0	0	2	0	0	0	0
16.2.1.3	secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL	2 (0.87%)	0	0	0	2	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.87%)	0	0	0	1	1	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	2 (0.87%)	1	1	0	0	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.87%)	0	0	0	0	1	1	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	2 (0.87%)	0	0	0	0	2	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	2 (0.87%)	0	0	0	0	2	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	2 (0.87%)	0	0	0	0	2	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (0.87%)	0	0	0	1	0	0	0	1
3.5	minor CHO metabolism.others	2 (0.87%)	1	0	1	0	0	0	0	0
28.99	DNA.unspecified	2 (0.87%)	1	0	0	0	1	0	0	0
30.11	signalling.light	2 (0.87%)	0	0	0	2	0	0	0	0
30.4	signalling.phosphinositides	2 (0.87%)	0	0	0	0	2	0	0	0
34.2	transport.sugars	2 (0.87%)	0	0	0	0	2	0	0	0
34.22	transport.cyclic nucleotide or calcium regulated channels	2 (0.87%)	0	0	0	2	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	2 (0.87%)	0	0	0	0	1	0	0	1
1.1.3	PS.lightreaction.cytochrome b6/f	1 (0.43%)	0	0	1	0	0	0	0	0
1.1.3.4	PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)	1 (0.43%)	0	0	1	0	0	0	0	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.43%)	0	0	0	1	0	0	0	0
1.1.5.3	PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase	1 (0.43%)	0	0	0	1	0	0	0	0
10.1	cell wall.precursor synthesis	1 (0.43%)	0	0	0	1	0	0	0	0
10.1.5	cell wall.precursor synthesis.UXS	1 (0.43%)	0	0	0	1	0	0	0	0
10.6	cell wall.degradation	1 (0.43%)	0	0	0	0	0	0	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.43%)	0	0	0	0	0	0	0	1
2.1	major CHO metabolism.synthesis	1 (0.43%)	1	0	0	0	0	0	0	0
3.2	minor CHO metabolism.trehalose	1 (0.43%)	0	0	0	1	0	0	0	0
3.6	minor CHO metabolism.callose	1 (0.43%)	1	0	0	0	0	0	0	0
7.1	OPP.oxidative PP	1 (0.43%)	0	0	0	0	0	0	0	1
7.2	OPP.non-reductive PP	1 (0.43%)	0	1	0	0	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.43%)	0	0	0	1	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.43%)	0	0	0	1	0	0	0	0
11.8.1.2	lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase	1 (0.43%)	0	0	0	1	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.43%)	0	0	0	0	1	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.43%)	0	0	0	0	1	0	0	0
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase	1 (0.43%)	0	0	0	0	1	0	0	0
13	amino acid metabolism	1 (0.43%)	0	0	0	0	1	0	0	0
13.2	amino acid metabolism.degradation	1 (0.43%)	0	0	0	0	1	0	0	0
13.2.3	amino acid metabolism.degradation.aspartate family	1 (0.43%)	0	0	0	0	1	0	0	0
13.2.3.5	amino acid metabolism.degradation.aspartate family.lysine	1 (0.43%)	0	0	0	0	1	0	0	0
13.2.3.5.1	mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase	1 (0.43%)	0	0	0	0	1	0	0	0
17.8	hormone metabolism.salicylic acid	1 (0.43%)	0	0	0	0	1	0	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	1 (0.43%)	0	0	0	0	1	0	0	0
2.1.1	major CHO metabolism.synthesis.sucrose	1 (0.43%)	1	0	0	0	0	0	0	0
2.1.1.3	major CHO metabolism.synthesis.sucrose.FBPase	1 (0.43%)	1	0	0	0	0	0	0	0
3.2.2	minor CHO metabolism.trehalose.TPP	1 (0.43%)	0	0	0	1	0	0	0	0
17	hormone metabolism	1 (0.43%)	0	0	0	0	1	0	0	0
18	Co-factor and vitamine metabolism	1 (0.43%)	1	0	0	0	0	0	0	0
18.4	Co-factor and vitamine metabolism.pantothenate	1 (0.43%)	1	0	0	0	0	0	0	0
18.4.5	Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)	1 (0.43%)	1	0	0	0	0	0	0	0
21	redox	1 (0.43%)	1	0	0	0	0	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.43%)	1	0	0	0	0	0	0	0
26.10	misc.cytochrome P450	1 (0.43%)	0	0	0	1	0	0	0	0
26.23	misc.rhodanese	1 (0.43%)	0	0	0	0	0	0	1	0
27.2	RNA.transcription	1 (0.43%)	0	0	0	0	0	0	1	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	1 (0.43%)	0	0	1	0	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.43%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.43%)	0	0	0	0	0	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.43%)	0	0	0	0	1	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (0.43%)	0	0	0	0	1	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.43%)	0	0	0	0	1	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.43%)	0	0	0	0	1	0	0	0
27.3.48	RNA.regulation of transcription.FHA transcription factor	1 (0.43%)	0	1	0	0	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.43%)	0	0	0	0	1	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.43%)	0	0	0	1	0	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.43%)	0	0	0	0	1	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.43%)	0	1	0	0	0	0	0	0
27.4	RNA.RNA binding	1 (0.43%)	0	0	0	0	0	0	0	1
29.2	protein.synthesis	1 (0.43%)	0	0	0	0	1	0	0	0
29.2.1.1.1.1.7	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7	1 (0.43%)	0	1	0	0	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.43%)	0	0	0	0	1	0	0	0
29.3	protein.targeting	1 (0.43%)	0	1	0	0	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.43%)	0	1	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.43%)	0	1	0	0	0	0	0	0
29.7	protein.glycosylation	1 (0.43%)	0	1	0	0	0	0	0	0
29.7.9	protein.glycosylation.beta-1,2-xylosyltransferase(beta-1,2-XylT)	1 (0.43%)	0	1	0	0	0	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.43%)	0	0	0	0	0	0	0	1
30.2	signalling.receptor kinases	1 (0.43%)	0	0	0	0	0	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.43%)	0	0	0	0	0	1	0	0
30.5	signalling.G-proteins	1 (0.43%)	0	0	0	0	0	0	0	1
31.1	cell.organisation	1 (0.43%)	0	0	0	1	0	0	0	0
34.15	transport.potassium	1 (0.43%)	1	0	0	0	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.43%)	0	0	1	0	0	0	0	0
34.18	transport.unspecified anions	1 (0.43%)	0	1	0	0	0	0	0	0
7.1.1	OPP.oxidative PP.G6PD	1 (0.43%)	0	0	0	0	0	0	0	1
7.2.4	OPP.non-reductive PP.ribose 5-phosphate isomerase	1 (0.43%)	0	1	0	0	0	0	0	0