PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_417
Name: SEP4
Description: N/A

#Associated genes: 454
#Associated MapMan terms: 153

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	112 (24.67%)	12	18	5	20	20	14	14	9
27.3	RNA.regulation of transcription	103 (22.69%)	11	16	5	19	18	13	13	8
29	protein	23 (5.07%)	1	4	2	3	9	1	1	2
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	22 (4.85%)	2	3	2	6	2	3	1	3
30	signalling	17 (3.74%)	3	0	3	3	2	3	0	3
31	cell	16 (3.52%)	1	2	1	4	4	2	1	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	14 (3.08%)	3	3	0	4	1	1	1	1
27.3.99	RNA.regulation of transcription.unclassified	13 (2.86%)	2	1	1	2	3	1	2	1
33	development	13 (2.86%)	2	1	1	6	2	0	0	1
17	hormone metabolism	12 (2.64%)	0	2	0	5	1	3	1	0
28	DNA	12 (2.64%)	2	1	1	5	0	1	1	1
33.99	development.unspecified	12 (2.64%)	2	1	1	5	2	0	0	1
20	stress	11 (2.42%)	0	5	3	1	0	1	1	0
3	minor CHO metabolism	10 (2.20%)	1	0	0	5	2	1	1	0
10	cell wall	10 (2.20%)	0	5	1	2	0	0	0	2
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	10 (2.20%)	1	0	2	2	0	1	2	2
29.4	protein.postranslational modification	10 (2.20%)	1	1	1	2	5	0	0	0
34	transport	10 (2.20%)	0	1	3	3	2	1	0	0
26	misc	9 (1.98%)	2	2	0	3	0	1	0	1
27.1	RNA.processing	9 (1.98%)	1	2	0	1	2	1	1	1
31.1	cell.organisation	9 (1.98%)	0	0	1	2	4	1	1	0
16	secondary metabolism	7 (1.54%)	1	0	1	0	1	0	4	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	7 (1.54%)	1	4	0	0	1	0	1	0
28.2	DNA.repair	7 (1.54%)	1	0	1	2	0	1	1	1
29.4.1	protein.postranslational modification.kinase	7 (1.54%)	1	1	0	2	3	0	0	0
3.6	minor CHO metabolism.callose	6 (1.32%)	0	0	0	2	2	1	1	0
20.2	stress.abiotic	6 (1.32%)	0	3	1	0	0	1	1	0
16.1	secondary metabolism.isoprenoids	5 (1.10%)	1	0	0	0	0	0	4	0
17.1	hormone metabolism.abscisic acid	5 (1.10%)	0	1	0	3	0	1	0	0
20.1	stress.biotic	5 (1.10%)	0	2	2	1	0	0	0	0
29.2	protein.synthesis	5 (1.10%)	0	0	0	1	1	1	1	1
29.5	protein.degradation	5 (1.10%)	0	3	1	0	1	0	0	0
30.2	signalling.receptor kinases	5 (1.10%)	0	0	1	1	0	2	0	1
30.5	signalling.G-proteins	5 (1.10%)	3	0	1	1	0	0	0	0
16.1.5	secondary metabolism.isoprenoids.terpenoids	4 (0.88%)	0	0	0	0	0	0	4	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	4 (0.88%)	0	1	0	2	0	1	0	0
20.2.1	stress.abiotic.heat	4 (0.88%)	0	1	1	0	0	1	1	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	4 (0.88%)	0	0	0	0	1	2	1	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	4 (0.88%)	0	0	0	2	2	0	0	0
27.3.60	RNA.regulation of transcription.NIN-like bZIP-related family	4 (0.88%)	0	1	0	1	0	1	1	0
28.1	DNA.synthesis/chromatin structure	4 (0.88%)	1	1	0	2	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	4 (0.88%)	0	0	0	2	2	0	0	0
3.2	minor CHO metabolism.trehalose	4 (0.88%)	1	0	0	3	0	0	0	0
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	4 (0.88%)	1	0	0	3	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	4 (0.88%)	0	0	1	1	0	1	0	1
10.2	cell wall.cellulose synthesis	3 (0.66%)	0	3	0	0	0	0	0	0
10.2.2	cell wall.cellulose synthesis.COBRA	3 (0.66%)	0	3	0	0	0	0	0	0
10.6	cell wall.degradation	3 (0.66%)	0	1	1	0	0	0	0	1
10.7	cell wall.modification	3 (0.66%)	0	0	0	2	0	0	0	1
11	lipid metabolism	3 (0.66%)	1	0	0	0	0	1	0	1
11.5	lipid metabolism.glyceral metabolism	3 (0.66%)	1	0	0	0	0	1	0	1
11.5.2	lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)	3 (0.66%)	1	0	0	0	0	1	0	1
24	Biodegradation of Xenobiotics	3 (0.66%)	1	0	0	0	0	1	1	0
26.10	misc.cytochrome P450	3 (0.66%)	1	1	0	1	0	0	0	0
27.1.1	RNA.processing.splicing	3 (0.66%)	0	0	0	0	1	1	1	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	3 (0.66%)	1	2	0	0	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (0.66%)	0	0	0	0	0	1	2	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	3 (0.66%)	0	0	0	0	3	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (0.66%)	1	0	0	1	1	0	0	0
31.2	cell.division	3 (0.66%)	1	0	0	1	0	0	0	1
31.4	cell.vesicle transport	3 (0.66%)	0	1	0	1	0	1	0	0
34.1	transport.p- and v-ATPases	3 (0.66%)	0	0	1	2	0	0	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	2 (0.44%)	0	1	0	0	0	0	0	1
17.4	hormone metabolism.cytokinin	2 (0.44%)	0	0	0	0	1	1	0	0
17.5	hormone metabolism.ethylene	2 (0.44%)	0	0	0	1	0	1	0	0
17.8	hormone metabolism.salicylic acid	2 (0.44%)	0	0	0	1	0	0	1	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	2 (0.44%)	0	0	0	1	0	0	1	0
26.3	misc.gluco-, galacto- and mannosidases	2 (0.44%)	0	1	0	0	0	0	0	1
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	2 (0.44%)	0	1	0	0	0	0	0	1
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	2 (0.44%)	0	2	0	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	2 (0.44%)	0	0	0	0	2	0	0	0
27.3.42	RNA.regulation of transcription.Bromodomain proteins	2 (0.44%)	0	0	0	0	2	0	0	0
29.5.11	protein.degradation.ubiquitin	2 (0.44%)	0	1	0	0	1	0	0	0
29.5.5	protein.degradation.serine protease	2 (0.44%)	0	1	1	0	0	0	0	0
30.6	signalling.MAP kinases	2 (0.44%)	0	0	1	0	0	1	0	0
30.99	signalling.unspecified	2 (0.44%)	0	0	0	1	0	0	0	1
34.11	transport.NDP-sugars at the ER	2 (0.44%)	0	0	1	0	0	1	0	0
34.99	transport.misc	2 (0.44%)	0	0	1	0	1	0	0	0
1	PS	1 (0.22%)	0	0	0	1	0	0	0	0
1.1	PS.lightreaction	1 (0.22%)	0	0	0	1	0	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.22%)	0	0	0	1	0	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (0.22%)	0	0	0	1	0	0	0	0
2	major CHO metabolism	1 (0.22%)	0	0	0	0	1	0	0	0
10.5	cell wall.cell wall proteins	1 (0.22%)	0	1	0	0	0	0	0	0
10.5.5	cell wall.cell wall proteins.RGP	1 (0.22%)	0	1	0	0	0	0	0	0
10.6.2	cell wall.degradation.mannan-xylose-arabinose-fucose	1 (0.22%)	0	0	1	0	0	0	0	0
13	amino acid metabolism	1 (0.22%)	0	1	0	0	0	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.22%)	0	1	0	0	0	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.22%)	0	1	0	0	0	0	0	0
13.1.6.5	amino acid metabolism.synthesis.aromatic aa.tryptophan	1 (0.22%)	0	1	0	0	0	0	0	0
13.1.6.5.1	amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase	1 (0.22%)	0	1	0	0	0	0	0	0
15	metal handling	1 (0.22%)	0	0	0	0	0	1	0	0
15.2	metal handling.binding, chelation and storage	1 (0.22%)	0	0	0	0	0	1	0	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	1 (0.22%)	1	0	0	0	0	0	0	0
16.1.1.10	secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase	1 (0.22%)	1	0	0	0	0	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.22%)	0	0	1	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.22%)	0	0	0	0	1	0	0	0
17.1.1	hormone metabolism.abscisic acid.synthesis-degradation	1 (0.22%)	0	0	0	1	0	0	0	0
17.1.1.1	hormone metabolism.abscisic acid.synthesis-degradation.synthesis	1 (0.22%)	0	0	0	1	0	0	0	0
17.1.1.1.1	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase	1 (0.22%)	0	0	0	1	0	0	0	0
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	1 (0.22%)	0	0	0	0	0	0	0	1
17.2	hormone metabolism.auxin	1 (0.22%)	0	1	0	0	0	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.22%)	0	1	0	0	0	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.22%)	0	0	0	0	1	0	0	0
17.4.2	hormone metabolism.cytokinin.signal transduction	1 (0.22%)	0	0	0	0	0	1	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.22%)	0	0	0	1	0	0	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	1 (0.22%)	0	0	0	0	0	1	0	0
2.2	major CHO metabolism.degradation	1 (0.22%)	0	0	0	0	1	0	0	0
2.2.2	major CHO metabolism.degradation.starch	1 (0.22%)	0	0	0	0	1	0	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	1 (0.22%)	0	0	0	0	1	0	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	1 (0.22%)	0	0	0	0	1	0	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.22%)	0	0	1	0	0	0	0	0
20.2.3	stress.abiotic.drought/salt	1 (0.22%)	0	1	0	0	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.22%)	0	1	0	0	0	0	0	0
23	nucleotide metabolism	1 (0.22%)	0	0	0	0	0	1	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.22%)	0	0	0	0	0	1	0	0
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	1 (0.22%)	0	0	0	0	0	1	0	0
26.12	misc.peroxidases	1 (0.22%)	1	0	0	0	0	0	0	0
26.17	misc.dynamin	1 (0.22%)	0	0	0	0	0	1	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.22%)	0	0	0	1	0	0	0	0
26.9	misc.glutathione S transferases	1 (0.22%)	0	0	0	1	0	0	0	0
27.1.2	RNA.processing.RNA helicase	1 (0.22%)	0	1	0	0	0	0	0	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.22%)	0	0	0	0	0	0	1	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.22%)	0	0	0	0	1	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	1 (0.22%)	0	0	0	1	0	0	0	0
27.3.54	RNA.regulation of transcription.Histone acetyltransferases	1 (0.22%)	1	0	0	0	0	0	0	0
27.3.59	RNA.regulation of transcription.Methyl binding domain proteins	1 (0.22%)	0	0	0	0	0	1	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.22%)	0	0	0	0	0	1	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.22%)	0	0	0	0	0	0	0	1
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.22%)	0	0	0	0	0	0	1	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.22%)	0	0	0	1	0	0	0	0
28.99	DNA.unspecified	1 (0.22%)	0	0	0	1	0	0	0	0
29.1	protein.aa activation	1 (0.22%)	0	0	0	0	1	0	0	0
29.1.9	protein.aa activation.valine-tRNA ligase	1 (0.22%)	0	0	0	0	1	0	0	0
29.3	protein.targeting	1 (0.22%)	0	0	0	0	0	0	0	1
29.3.4	protein.targeting.secretory pathway	1 (0.22%)	0	0	0	0	0	0	0	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.22%)	0	0	0	0	0	0	0	1
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.22%)	0	0	0	0	1	0	0	0
29.5.11.4.1	protein.degradation.ubiquitin.E3.HECT	1 (0.22%)	0	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.22%)	0	0	0	0	0	1	0	0
29.5.2	protein.degradation.autophagy	1 (0.22%)	0	1	0	0	0	0	0	0
29.8	protein.assembly and cofactor ligation	1 (0.22%)	0	0	0	0	1	0	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.22%)	0	0	0	1	0	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.22%)	0	0	0	0	0	0	0	1
30.11	signalling.light	1 (0.22%)	0	0	0	0	1	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.22%)	0	0	0	0	0	1	0	0
30.3	signalling.calcium	1 (0.22%)	0	0	0	0	1	0	0	0
31.3	cell.cycle	1 (0.22%)	0	1	0	0	0	0	0	0
33.3	development.squamosa promoter binding like (SPL)	1 (0.22%)	0	0	0	1	0	0	0	0
34.12	transport.metal	1 (0.22%)	0	0	0	0	1	0	0	0
34.15	transport.potassium	1 (0.22%)	0	1	0	0	0	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.22%)	0	0	0	1	0	0	0	0
34.19.2	transport.Major Intrinsic Proteins.TIP	1 (0.22%)	0	0	0	1	0	0	0	0