PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_364
Name: FLC
Description: N/A

#Associated genes: 717
#Associated MapMan terms: 204

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	100 (13.95%)	15	4	5	18	17	16	14	11
27.3	RNA.regulation of transcription	73 (10.18%)	12	3	4	8	11	14	12	9
29	protein	48 (6.69%)	4	3	4	11	7	8	7	4
34	transport	45 (6.28%)	8	1	6	9	5	7	5	4
3	minor CHO metabolism	32 (4.46%)	4	4	2	7	5	3	3	4
3.6	minor CHO metabolism.callose	31 (4.32%)	4	4	2	7	4	3	3	4
28	DNA	30 (4.18%)	2	2	2	4	5	7	4	4
31	cell	30 (4.18%)	5	2	5	5	5	5	1	2
26	misc	29 (4.04%)	2	5	2	6	5	5	0	4
33	development	29 (4.04%)	6	4	3	5	4	2	2	3
33.99	development.unspecified	25 (3.49%)	5	3	3	3	4	2	2	3
28.1	DNA.synthesis/chromatin structure	21 (2.93%)	2	2	2	2	5	3	3	2
30	signalling	19 (2.65%)	2	0	1	5	3	1	3	4
11	lipid metabolism	16 (2.23%)	2	3	2	0	3	2	2	2
29.4	protein.postranslational modification	16 (2.23%)	1	0	2	3	2	0	4	4
17	hormone metabolism	15 (2.09%)	1	2	2	3	1	2	2	2
31.1	cell.organisation	14 (1.95%)	3	0	2	3	2	2	0	2
27.1	RNA.processing	13 (1.81%)	2	0	1	6	2	2	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	13 (1.81%)	1	0	0	2	4	2	3	1
34.16	transport.ABC transporters and multidrug resistance systems	13 (1.81%)	2	0	1	3	2	2	3	0
11.9	lipid metabolism.lipid degradation	12 (1.67%)	2	2	1	0	2	1	2	2
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	12 (1.67%)	4	2	2	0	1	1	2	0
17.2	hormone metabolism.auxin	11 (1.53%)	0	2	1	3	1	2	1	1
29.2	protein.synthesis	11 (1.53%)	2	0	0	4	1	3	1	0
29.5	protein.degradation	11 (1.53%)	1	0	1	3	2	2	2	0
10	cell wall	10 (1.39%)	1	2	1	1	1	3	0	1
17.2.2	hormone metabolism.auxin.signal transduction	10 (1.39%)	0	2	1	3	1	1	1	1
27.4	RNA.RNA binding	10 (1.39%)	0	1	0	2	3	0	2	2
29.4.1	protein.postranslational modification.kinase	10 (1.39%)	0	0	1	3	1	0	4	1
21	redox	9 (1.26%)	1	1	0	3	2	1	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	9 (1.26%)	0	0	2	4	1	0	2	0
30.5	signalling.G-proteins	9 (1.26%)	1	0	1	2	2	0	2	1
27.3.99	RNA.regulation of transcription.unclassified	8 (1.12%)	0	0	0	3	0	2	2	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	8 (1.12%)	0	0	1	3	0	0	3	1
26.2	misc.UDP glucosyl and glucoronyl transferases	7 (0.98%)	0	1	1	1	1	1	0	2
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	7 (0.98%)	0	1	1	1	1	2	0	1
31.2	cell.division	7 (0.98%)	0	1	1	1	3	1	0	0
34.3	transport.amino acids	7 (0.98%)	0	1	4	1	0	0	0	1
21.2	redox.ascorbate and glutathione	6 (0.84%)	1	0	0	2	2	0	0	1
21.2.2	redox.ascorbate and glutathione.glutathione	6 (0.84%)	1	0	0	2	2	0	0	1
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	6 (0.84%)	1	0	0	0	1	2	1	1
28.99	DNA.unspecified	6 (0.84%)	0	0	0	1	0	3	1	1
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	5 (0.70%)	1	0	1	0	0	1	1	1
11.9.4.13	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase	5 (0.70%)	1	0	1	0	0	1	1	1
19	tetrapyrrole synthesis	5 (0.70%)	0	3	0	1	1	0	0	0
19.15	tetrapyrrole synthesis.chlorophyll synthase	5 (0.70%)	0	3	0	1	1	0	0	0
20	stress	5 (0.70%)	0	0	1	2	1	0	0	1
26.18	misc.invertase/pectin methylesterase inhibitor family protein	5 (0.70%)	0	1	0	2	1	1	0	0
26.4	misc.beta 1,3 glucan hydrolases	5 (0.70%)	1	0	0	2	2	0	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	5 (0.70%)	1	0	0	2	2	0	0	0
27.1.19	RNA.processing.ribonucleases	5 (0.70%)	0	0	1	2	1	1	0	0
30.4	signalling.phosphinositides	5 (0.70%)	1	0	0	0	1	1	1	1
31.4	cell.vesicle transport	5 (0.70%)	1	1	2	0	0	1	0	0
34.15	transport.potassium	5 (0.70%)	1	0	1	0	2	0	1	0
34.8	transport.metabolite transporters at the envelope membrane	5 (0.70%)	1	0	0	1	0	2	0	1
1	PS	4 (0.56%)	0	1	0	2	0	1	0	0
1.1	PS.lightreaction	4 (0.56%)	0	1	0	2	0	1	0	0
10.6	cell wall.degradation	4 (0.56%)	0	0	1	0	1	2	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	4 (0.56%)	0	0	1	0	1	2	0	0
11.3	lipid metabolism.Phospholipid synthesis	4 (0.56%)	0	1	1	0	1	1	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	4 (0.56%)	1	1	0	0	1	0	1	0
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase	4 (0.56%)	1	1	0	0	1	0	1	0
20.2	stress.abiotic	4 (0.56%)	0	0	1	2	0	0	0	1
27.2	RNA.transcription	4 (0.56%)	1	0	0	2	1	0	0	0
27.3.65	RNA.regulation of transcription.Polycomb Group (PcG)	4 (0.56%)	1	1	0	0	1	0	0	1
29.2.4	protein.synthesis.elongation	4 (0.56%)	0	0	0	2	0	2	0	0
29.3	protein.targeting	4 (0.56%)	0	2	0	0	1	1	0	0
29.5.11	protein.degradation.ubiquitin	4 (0.56%)	1	0	0	2	1	0	0	0
31.3	cell.cycle	4 (0.56%)	1	0	0	1	0	1	1	0
34.7	transport.phosphate	4 (0.56%)	1	0	0	1	1	0	0	1
1.1.1	PS.lightreaction.photosystem II	3 (0.42%)	0	0	0	2	0	1	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	3 (0.42%)	0	0	0	2	0	1	0	0
2	major CHO metabolism	3 (0.42%)	1	0	0	0	1	0	0	1
10.8	cell wall.pectin*esterases	3 (0.42%)	1	2	0	0	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	3 (0.42%)	0	1	0	0	1	0	0	1
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	3 (0.42%)	0	1	0	0	1	0	0	1
2.2	major CHO metabolism.degradation	3 (0.42%)	1	0	0	0	1	0	0	1
12.2	N-metabolism.ammonia metabolism	3 (0.42%)	0	1	0	2	0	0	0	0
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	3 (0.42%)	0	1	0	2	0	0	0	0
2.2.2	major CHO metabolism.degradation.starch	3 (0.42%)	1	0	0	0	1	0	0	1
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (0.42%)	1	0	0	0	1	0	0	1
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (0.42%)	1	0	0	0	1	0	0	1
12	N-metabolism	3 (0.42%)	0	1	0	2	0	0	0	0
25	C1-metabolism	3 (0.42%)	0	0	1	1	0	0	0	1
25.5	C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase	3 (0.42%)	0	0	1	1	0	0	0	1
26.12	misc.peroxidases	3 (0.42%)	1	1	0	0	0	0	0	1
26.28	misc.GDSL-motif lipase	3 (0.42%)	0	0	1	0	0	1	0	1
27.1.2	RNA.processing.RNA helicase	3 (0.42%)	1	0	0	1	0	1	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (0.42%)	1	0	0	0	1	0	1	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	3 (0.42%)	1	0	0	0	0	1	1	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	3 (0.42%)	1	0	0	0	0	2	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	3 (0.42%)	0	0	0	0	1	2	0	0
27.3.80	RNA.regulation of transcription.zf-HD	3 (0.42%)	1	0	0	1	0	1	0	0
28.2	DNA.repair	3 (0.42%)	0	0	0	1	0	1	0	1
29.5.11.20	protein.degradation.ubiquitin.proteasom	3 (0.42%)	1	0	0	1	1	0	0	0
29.5.3	protein.degradation.cysteine protease	3 (0.42%)	0	0	0	0	1	0	2	0
29.5.9	protein.degradation.AAA type	3 (0.42%)	0	0	1	1	1	0	0	0
29.6	protein.folding	3 (0.42%)	0	0	0	1	1	1	0	0
30.3	signalling.calcium	3 (0.42%)	0	0	0	2	0	0	0	1
31.3.1	cell.cycle.peptidylprolyl isomerase	3 (0.42%)	1	0	0	1	0	0	1	0
34.12	transport.metal	3 (0.42%)	0	0	0	1	0	1	0	1
34.14	transport.unspecified cations	3 (0.42%)	1	0	0	1	0	1	0	0
10.7	cell wall.modification	2 (0.28%)	0	0	0	1	0	0	0	1
10.8.99	cell wall.pectin*esterases.misc	2 (0.28%)	1	1	0	0	0	0	0	0
11.3.10	lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase	2 (0.28%)	0	0	0	0	1	1	0	0
13	amino acid metabolism	2 (0.28%)	0	0	0	0	1	0	1	0
16	secondary metabolism	2 (0.28%)	0	1	0	1	0	0	0	0
17.5	hormone metabolism.ethylene	2 (0.28%)	0	0	1	0	0	0	1	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	2 (0.28%)	0	0	1	0	0	0	1	0
17.7	hormone metabolism.jasmonate	2 (0.28%)	1	0	0	0	0	0	1	0
17.7.1	hormone metabolism.jasmonate.synthesis-degradation	2 (0.28%)	1	0	0	0	0	0	1	0
18	Co-factor and vitamine metabolism	2 (0.28%)	0	0	0	1	1	0	0	0
20.2.3	stress.abiotic.drought/salt	2 (0.28%)	0	0	1	1	0	0	0	0
21.6	redox.dismutases and catalases	2 (0.28%)	0	1	0	1	0	0	0	0
26.10	misc.cytochrome P450	2 (0.28%)	0	0	0	1	0	1	0	0
26.3	misc.gluco-, galacto- and mannosidases	2 (0.28%)	0	2	0	0	0	0	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	2 (0.28%)	0	2	0	0	0	0	0	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	2 (0.28%)	0	0	1	0	1	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.28%)	1	0	0	1	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	2 (0.28%)	0	0	0	0	1	0	1	0
27.3.57	RNA.regulation of transcription.JUMONJI family	2 (0.28%)	0	0	1	0	0	1	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (0.28%)	0	0	0	0	0	1	1	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.28%)	1	0	0	0	0	1	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	2 (0.28%)	1	0	0	0	0	0	0	1
29.1	protein.aa activation	2 (0.28%)	0	1	1	0	0	0	0	0
29.1.40	protein.aa activation.bifunctional aminoacyl-tRNA synthetase	2 (0.28%)	0	1	1	0	0	0	0	0
29.2.1.1.1.1.2	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S2	2 (0.28%)	0	0	1	0	0	0	1	0
29.2.1.2.2.518	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A	2 (0.28%)	1	0	0	0	1	0	0	0
29.3.1	protein.targeting.nucleus	2 (0.28%)	0	1	0	0	0	1	0	0
29.3.4	protein.targeting.secretory pathway	2 (0.28%)	0	1	0	0	1	0	0	0
30.2	signalling.receptor kinases	2 (0.28%)	0	0	0	1	0	0	0	1
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	2 (0.28%)	0	0	0	0	0	1	0	1
33.1	development.storage proteins	2 (0.28%)	1	1	0	0	0	0	0	0
33.3	development.squamosa promoter binding like (SPL)	2 (0.28%)	0	0	0	2	0	0	0	0
34.20	transport.porins	2 (0.28%)	1	0	0	1	0	0	0	0
34.2	transport.sugars	2 (0.28%)	1	0	0	1	0	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.14%)	0	1	0	0	0	0	0	0
7	OPP	1 (0.14%)	0	0	0	0	0	1	0	0
8	TCA / org transformation	1 (0.14%)	0	1	0	0	0	0	0	0
10.2	cell wall.cellulose synthesis	1 (0.14%)	0	0	0	0	0	1	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.14%)	0	1	0	0	0	0	0	0
11.3.6	lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase	1 (0.14%)	0	0	1	0	0	0	0	0
11.3.7	lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase	1 (0.14%)	0	1	0	0	0	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.14%)	0	0	0	0	0	0	1	0
13.1.3	amino acid metabolism.synthesis.aspartate family	1 (0.14%)	0	0	0	0	0	0	1	0
13.1.3.5	amino acid metabolism.synthesis.aspartate family.lysine	1 (0.14%)	0	0	0	0	0	0	1	0
13.1.3.5.2	amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase	1 (0.14%)	0	0	0	0	0	0	1	0
13.2	amino acid metabolism.degradation	1 (0.14%)	0	0	0	0	1	0	0	0
13.2.4	amino acid metabolism.degradation.branched chain group	1 (0.14%)	0	0	0	0	1	0	0	0
13.2.4.1	amino acid metabolism.degradation.branched chain group.shared	1 (0.14%)	0	0	0	0	1	0	0	0
16.1	secondary metabolism.isoprenoids	1 (0.14%)	0	0	0	1	0	0	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	1 (0.14%)	0	0	0	1	0	0	0	0
16.1.4.1	secondary metabolism.isoprenoids.carotenoids.phytoene synthase	1 (0.14%)	0	0	0	1	0	0	0	0
3.4	minor CHO metabolism.myo-inositol	1 (0.14%)	0	0	0	0	1	0	0	0
7.1	OPP.oxidative PP	1 (0.14%)	0	0	0	0	0	1	0	0
8.1	TCA / org transformation.TCA	1 (0.14%)	0	1	0	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.14%)	0	1	0	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.14%)	0	1	0	0	0	0	0	0
16.2.1.6	secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT	1 (0.14%)	0	1	0	0	0	0	0	0
17.1	hormone metabolism.abscisic acid	1 (0.14%)	0	0	0	0	0	0	0	1
17.1.2	hormone metabolism.abscisic acid.signal transduction	1 (0.14%)	0	0	0	0	0	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.14%)	0	0	0	0	0	1	0	0
17.7.1.1	hormone metabolism.jasmonate.synthesis-degradation.lipases	1 (0.14%)	1	0	0	0	0	0	0	0
18.1	Co-factor and vitamine metabolism.molybdenum cofactor	1 (0.14%)	0	0	0	0	1	0	0	0
18.3	Co-factor and vitamine metabolism.riboflavin	1 (0.14%)	0	0	0	1	0	0	0	0
18.3.2	Co-factor and vitamine metabolism.riboflavin.riboflavin synthase	1 (0.14%)	0	0	0	1	0	0	0	0
20.1	stress.biotic	1 (0.14%)	0	0	0	0	1	0	0	0
20.2.1	stress.abiotic.heat	1 (0.14%)	0	0	0	0	0	0	0	1
20.2.2	stress.abiotic.cold	1 (0.14%)	0	0	0	1	0	0	0	0
21.4	redox.glutaredoxins	1 (0.14%)	0	0	0	0	0	1	0	0
23	nucleotide metabolism	1 (0.14%)	0	0	1	0	0	0	0	0
23.2	nucleotide metabolism.degradation	1 (0.14%)	0	0	1	0	0	0	0	0
23.2.2	nucleotide metabolism.degradation.purine	1 (0.14%)	0	0	1	0	0	0	0	0
23.3	nucleotide metabolism.salvage	1 (0.14%)	0	0	1	0	0	0	0	0
26.1	misc.misc2	1 (0.14%)	0	0	0	0	1	0	0	0
26.19	misc.plastocyanin-like	1 (0.14%)	0	0	0	0	0	1	0	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.2	RNA.regulation of transcription.Alfin-like	1 (0.14%)	1	0	0	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.14%)	0	0	0	0	0	0	0	1
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.14%)	1	0	0	0	0	0	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	1 (0.14%)	0	0	0	0	0	0	1	0
27.3.38	RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family	1 (0.14%)	0	0	0	0	0	0	1	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.14%)	0	0	0	0	0	0	0	1
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.71	RNA.regulation of transcription.SNF7	1 (0.14%)	0	0	0	0	0	0	0	1
29.2.1.1.1.2.14	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14	1 (0.14%)	0	0	1	0	0	0	0	0
29.2.1.2.2.32	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32	1 (0.14%)	0	0	0	1	0	0	0	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	1 (0.14%)	1	0	0	0	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.14%)	1	0	0	0	0	0	0	0
29.3.4.1	protein.targeting.secretory pathway.ER	1 (0.14%)	0	1	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.14%)	0	0	0	0	1	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.14%)	0	0	0	1	0	0	0	0
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (0.14%)	0	0	0	1	0	0	0	0
29.5.5	protein.degradation.serine protease	1 (0.14%)	0	0	0	0	0	1	0	0
29.7	protein.glycosylation	1 (0.14%)	0	0	0	0	0	1	0	0
3.4.3	minor CHO metabolism.myo-inositol.InsP Synthases	1 (0.14%)	0	0	0	0	1	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.14%)	0	0	0	1	0	0	0	0
30.2.8	signalling.receptor kinases.leucine rich repeat VIII	1 (0.14%)	0	0	0	0	0	0	0	1
30.2.8.2	signalling.receptor kinases.leucine rich repeat VIII.VIII-2	1 (0.14%)	0	0	0	0	0	0	0	1
34.19	transport.Major Intrinsic Proteins	1 (0.14%)	0	0	0	0	0	1	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	1 (0.14%)	0	0	0	0	0	1	0	0
34.99	transport.misc	1 (0.14%)	0	0	0	0	0	0	1	0
7.1.1	OPP.oxidative PP.G6PD	1 (0.14%)	0	0	0	0	0	1	0	0
8.1.7	TCA / org transformation.TCA.succinate dehydrogenase	1 (0.14%)	0	1	0	0	0	0	0	0