MapMan terms associated with a binding site

Binding site
Matrix_34
Name
RAV1_2
Description
RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants
#Associated genes
892
#Associated MapMan terms
271

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA207 (23.21%)8110659552215031
27.3RNA.regulation of transcription181 (20.29%)690550482012031
29protein79 (8.86%)2302192485016
29.4protein.postranslational modification44 (4.93%)220014115307
30signalling44 (4.93%)200115113408
31cell32 (3.59%)11001391304
26misc27 (3.03%)0401491107
33development27 (3.03%)12009102003
29.5protein.degradation26 (2.91%)0102492206
34transport26 (2.91%)01024112204
33.99development.unspecified23 (2.58%)1200981002
1PS22 (2.47%)1102632205
31.1cell.organisation20 (2.24%)1000950203
17hormone metabolism18 (2.02%)1200714102
1.1PS.lightreaction17 (1.91%)0101332205
27.1RNA.processing17 (1.91%)1200642200
27.3.67RNA.regulation of transcription.putative transcription regulator15 (1.68%)2001231402
11lipid metabolism14 (1.57%)0001360202
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family13 (1.46%)0102341002
27.1.2RNA.processing.RNA helicase12 (1.35%)1200242100
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family12 (1.35%)0100442001
27.3.35RNA.regulation of transcription.bZIP transcription factor family12 (1.35%)0100234200
27.3.99RNA.regulation of transcription.unclassified12 (1.35%)0000341004
28DNA12 (1.35%)2000350101
29.5.11.4.2protein.degradation.ubiquitin.E3.RING12 (1.35%)1100042103
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX12 (1.35%)1100521200
30.2signalling.receptor kinases12 (1.35%)0001431201
3minor CHO metabolism11 (1.23%)0001320203
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family11 (1.23%)0000810101
29.5.11protein.degradation.ubiquitin11 (1.23%)0101122103
30.5signalling.G-proteins11 (1.23%)1000241003
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family10 (1.12%)1000151200
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family10 (1.12%)1401111001
28.1DNA.synthesis/chromatin structure10 (1.12%)2000330101
30.2.11signalling.receptor kinases.leucine rich repeat XI10 (1.12%)0001420201
30.3signalling.calcium10 (1.12%)1000511002
10cell wall9 (1.01%)0000410103
11.1lipid metabolism.FA synthesis and FA elongation9 (1.01%)0001150101
20stress9 (1.01%)1100211201
27.3.29RNA.regulation of transcription.TCP transcription factor family9 (1.01%)0000221004
17.2hormone metabolism.auxin8 (0.90%)0000411002
27.3.11RNA.regulation of transcription.C2H2 zinc finger family8 (0.90%)0001232000
3.6minor CHO metabolism.callose8 (0.90%)0001310102
11.1.7lipid metabolism.FA synthesis and FA elongation.ACP thioesterase7 (0.78%)0000140101
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated7 (0.78%)0000411001
18Co-factor and vitamine metabolism7 (0.78%)0000230002
27.3.21RNA.regulation of transcription.GRAS transcription factor family7 (0.78%)0000140002
27.4RNA.RNA binding7 (0.78%)0001230100
30.11signalling.light7 (0.78%)0000400102
34.2transport.sugars7 (0.78%)0100131001
20.2stress.abiotic6 (0.67%)0100110201
26.2misc.UDP glucosyl and glucoronyl transferases6 (0.67%)0000120102
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family6 (0.67%)0000201201
29.5.11.5protein.degradation.ubiquitin.ubiquitin protease6 (0.67%)0001111101
1.1.3PS.lightreaction.cytochrome b6/f5 (0.56%)0000300101
16secondary metabolism5 (0.56%)0000130001
17.5hormone metabolism.ethylene5 (0.56%)1100201000
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated5 (0.56%)1100201000
23nucleotide metabolism5 (0.56%)0000310001
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family5 (0.56%)0000110003
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family5 (0.56%)0000220001
27.3.54RNA.regulation of transcription.Histone acetyltransferases5 (0.56%)0000111101
27.3.64RNA.regulation of transcription.PHOR15 (0.56%)0000111002
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family5 (0.56%)0000211001
29.3protein.targeting5 (0.56%)0000130001
29.4.1protein.postranslational modification.kinase5 (0.56%)0000210200
31.4cell.vesicle transport5 (0.56%)0100121000
34.99transport.misc5 (0.56%)0000120002
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration4 (0.45%)0000000103
1.3PS.calvin cycle4 (0.45%)1001200000
9mitochondrial electron transport / ATP synthesis4 (0.45%)1000100200
10.6cell wall.degradation4 (0.45%)0000200101
10.6.3cell wall.degradation.pectate lyases and polygalacturonases4 (0.45%)0000200101
20.2.1stress.abiotic.heat4 (0.45%)0100100101
26.4misc.beta 1,3 glucan hydrolases4 (0.45%)0000210001
26.7misc.oxidases - copper, flavone etc4 (0.45%)0100120000
27.1.1RNA.processing.splicing4 (0.45%)0000300100
27.3.25RNA.regulation of transcription.MYB domain transcription factor family4 (0.45%)0200110000
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII4 (0.45%)0000210100
9.1mitochondrial electron transport / ATP synthesis.NADH-DH4 (0.45%)1000100200
31.3cell.cycle4 (0.45%)0000310000
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear4 (0.45%)1000100200
21redox4 (0.45%)0000120001
1.1.1PS.lightreaction.photosystem II3 (0.34%)0101010000
1.1.3.3PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)3 (0.34%)0000200100
1.1.5PS.lightreaction.other electron carrier (ox/red)3 (0.34%)0000020001
1.1.5.2PS.lightreaction.other electron carrier (ox/red).ferredoxin3 (0.34%)0000020001
16.10secondary metabolism.simple phenols3 (0.34%)0000030000
18.2Co-factor and vitamine metabolism.thiamine3 (0.34%)0000200001
20.1stress.biotic3 (0.34%)1000101000
23.1nucleotide metabolism.synthesis3 (0.34%)0000110001
23.1.3nucleotide metabolism.synthesis.PRS-PP3 (0.34%)0000110001
25C1-metabolism3 (0.34%)0100011000
26.10misc.cytochrome P4503 (0.34%)0100000002
26.22misc.short chain dehydrogenase/reductase (SDR)3 (0.34%)0000020001
27.2RNA.transcription3 (0.34%)1000200000
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP3 (0.34%)0000120000
27.3.40RNA.regulation of transcription.Aux/IAA family3 (0.34%)0000120000
27.3.5RNA.regulation of transcription.ARR3 (0.34%)0000200001
29.2protein.synthesis3 (0.34%)0000011001
29.2.1.1.2.1.29protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S293 (0.34%)0000111000
29.2.3protein.synthesis.initiation3 (0.34%)0000011001
29.3.1protein.targeting.nucleus3 (0.34%)0000030000
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ3 (0.34%)0300000000
29.5.5protein.degradation.serine protease3 (0.34%)0000020001
30.4signalling.phosphinositides3 (0.34%)0000030000
31.2cell.division3 (0.34%)0000010101
34.16transport.ABC transporters and multidrug resistance systems3 (0.34%)0001110000
1.1.1.1PS.lightreaction.photosystem II.LHC-II2 (0.22%)0101000000
1.3.6PS.calvin cycle.aldolase2 (0.22%)1001000000
1.3.9PS.calvin cycle.seduheptulose bisphosphatase2 (0.22%)0000200000
2major CHO metabolism2 (0.22%)0000010001
7OPP2 (0.22%)1000010000
10.2cell wall.cellulose synthesis2 (0.22%)0000010001
10.7cell wall.modification2 (0.22%)0000100001
11.8lipid metabolism.exotics(steroids, squalene etc)2 (0.22%)0000110000
11.9lipid metabolism.lipid degradation2 (0.22%)0000000101
13amino acid metabolism2 (0.22%)0000010001
13.1amino acid metabolism.synthesis2 (0.22%)0000010001
17.3hormone metabolism.brassinosteroid2 (0.22%)0100001000
17.3.2hormone metabolism.brassinosteroid.signal transduction2 (0.22%)0100001000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR2 (0.22%)0100001000
18.3Co-factor and vitamine metabolism.riboflavin2 (0.22%)0000020000
18.3.1Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II2 (0.22%)0000020000
18.4Co-factor and vitamine metabolism.pantothenate2 (0.22%)0000010001
18.4.2Co-factor and vitamine metabolism.pantothenate.3-methyl-2-oxobutanoate hydroxymethyltransferase (KPHMT,PANB)2 (0.22%)0000010001
20.1.7stress.biotic.PR-proteins2 (0.22%)1000001000
20.2.3stress.abiotic.drought/salt2 (0.22%)0000010100
21.2redox.ascorbate and glutathione2 (0.22%)0000100001
24Biodegradation of Xenobiotics2 (0.22%)0000100100
26.13misc.acid and other phosphatases2 (0.22%)0100010000
27.3.24RNA.regulation of transcription.MADS box transcription factor family2 (0.22%)0000000002
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family2 (0.22%)0000001001
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors2 (0.22%)0000011000
29.2.1.2.2.3protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32 (0.22%)0001100000
29.3.4protein.targeting.secretory pathway2 (0.22%)0000100001
29.5.11.20protein.degradation.ubiquitin.proteasom2 (0.22%)0000001001
30.2.3signalling.receptor kinases.leucine rich repeat III2 (0.22%)0000101000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase2 (0.22%)0000020000
33.2development.late embryogenesis abundant2 (0.22%)0000020000
34.15transport.potassium2 (0.22%)0000001001
34.3transport.amino acids2 (0.22%)0000010100
34.6transport.sulphate2 (0.22%)0001000100
34.9transport.metabolite transporters at the mitochondrial membrane2 (0.22%)0000020000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits1 (0.11%)0000010000
1.1.2PS.lightreaction.photosystem I1 (0.11%)0000001000
1.1.2.2PS.lightreaction.photosystem I.PSI polypeptide subunits1 (0.11%)0000001000
1.1.3.4PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)1 (0.11%)0000100000
1.1.4PS.lightreaction.ATP synthase1 (0.11%)0000001000
1.1.4.4PS.lightreaction.ATP synthase.gamma chain1 (0.11%)0000001000
1.2PS.photorespiration1 (0.11%)0000100000
1.2.3PS.photorespiration.aminotransferases peroxisomal1 (0.11%)0000100000
10.2.1cell wall.cellulose synthesis.cellulose synthase1 (0.11%)0000010000
10.5.4cell wall.cell wall proteins.HRGP1 (0.11%)0000100000
11.1.1lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation1 (0.11%)0001000000
11.1.1.2lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex1 (0.11%)0001000000
11.1.1.2.1lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase1 (0.11%)0001000000
11.1.8lipid metabolism.FA synthesis and FA elongation.acyl coa ligase1 (0.11%)0000010000
11.3.5lipid metabolism.Phospholipid synthesis.diacylglycerol kinase1 (0.11%)0000100000
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids1 (0.11%)0000100000
11.8.1.2lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase1 (0.11%)0000100000
11.8.7lipid metabolism.exotics (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)1 (0.11%)0000010000
11.9.2lipid metabolism.lipid degradation.lipases1 (0.11%)0000000001
11.9.3lipid metabolism.lipid degradation.lysophospholipases1 (0.11%)0000000100
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase1 (0.11%)0000000100
2.1major CHO metabolism.synthesis1 (0.11%)0000000001
2.2major CHO metabolism.degradation1 (0.11%)0000010000
3.1minor CHO metabolism.raffinose family1 (0.11%)0000010000
3.2minor CHO metabolism.trehalose1 (0.11%)0000000100
3.5minor CHO metabolism.others1 (0.11%)0000000001
7.2OPP.non-reductive PP1 (0.11%)0000010000
7.3OPP.electron transfer1 (0.11%)1000000000
10.5cell wall.cell wall proteins1 (0.11%)0000100000
11.3lipid metabolism.Phospholipid synthesis1 (0.11%)0000100000
12N-metabolism1 (0.11%)0000010000
12.2N-metabolism.ammonia metabolism1 (0.11%)0000010000
12.2.1N-metabolism.ammonia metabolism.glutamate synthase1 (0.11%)0000010000
13.1.1.3.11amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase1 (0.11%)0000100000
13.1.3amino acid metabolism.synthesis.aspartate family1 (0.11%)0000000001
13.1.3.5amino acid metabolism.synthesis.aspartate family.lysine1 (0.11%)0000000001
13.1.5amino acid metabolism.synthesis.serine-glycine-cysteine group1 (0.11%)0000010000
13.1.5.3amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine1 (0.11%)0000010000
13.1.5.3.1amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL1 (0.11%)0000010000
14S-assimilation1 (0.11%)0000100000
14.2S-assimilation.APR1 (0.11%)0000100000
15metal handling1 (0.11%)0000010000
15.2metal handling.binding, chelation and storage1 (0.11%)0000010000
16.1secondary metabolism.isoprenoids1 (0.11%)0000000001
16.1.4secondary metabolism.isoprenoids.carotenoids1 (0.11%)0000000001
16.1.4.4secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase1 (0.11%)0000000001
16.8secondary metabolism.flavonoids1 (0.11%)0000100000
16.8.1secondary metabolism.flavonoids.anthocyanins1 (0.11%)0000100000
16.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase1 (0.11%)0000100000
17.1hormone metabolism.abscisic acid1 (0.11%)0000000100
17.1.1hormone metabolism.abscisic acid.synthesis-degradation1 (0.11%)0000000100
17.1.1.1hormone metabolism.abscisic acid.synthesis-degradation.synthesis1 (0.11%)0000000100
17.1.1.1.1hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase1 (0.11%)0000000100
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase1 (0.11%)0000010000
17.2.2hormone metabolism.auxin.signal transduction1 (0.11%)0000000001
17.4hormone metabolism.cytokinin1 (0.11%)0000100000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.11%)0000100000
17.6hormone metabolism.gibberelin1 (0.11%)0000001000
17.6.3hormone metabolism.gibberelin.induced-regulated-responsive-activated1 (0.11%)0000001000
19.1tetrapyrrole synthesis.glu-tRNA synthetase1 (0.11%)0000000001
2.1.2major CHO metabolism.synthesis.starch1 (0.11%)0000000001
2.1.2.2major CHO metabolism.synthesis.starch.starch synthase1 (0.11%)0000000001
2.2.2major CHO metabolism.degradation.starch1 (0.11%)0000010000
2.2.2.6major CHO metabolism.degradation.starch.transporter1 (0.11%)0000010000
19tetrapyrrole synthesis1 (0.11%)0000000001
20.1.3stress.biotic.signalling1 (0.11%)0000100000
20.1.3.1stress.biotic.signalling.MLO-like1 (0.11%)0000100000
21.1redox.thioredoxin1 (0.11%)0000010000
21.2.1redox.ascorbate and glutathione.ascorbate1 (0.11%)0000100000
21.4redox.glutaredoxins1 (0.11%)0000010000
22polyamine metabolism1 (0.11%)0000000001
22.1polyamine metabolism.synthesis1 (0.11%)0000000001
22.1.2polyamine metabolism.synthesis.SAM decarboxylase1 (0.11%)0000000001
23.3nucleotide metabolism.salvage1 (0.11%)0000100000
23.3.3nucleotide metabolism.salvage.NUDIX hydrolases1 (0.11%)0000100000
23.5nucleotide metabolism.deoxynucleotide metabolism1 (0.11%)0000100000
23.5.4nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase1 (0.11%)0000100000
24.2Biodegradation of Xenobiotics.lactoylglutathione lyase1 (0.11%)0000100000
26.1misc.misc21 (0.11%)0001000000
26.12misc.peroxidases1 (0.11%)0000010000
26.14misc.oxygenases1 (0.11%)0000010000
26.28misc.GDSL-motif lipase1 (0.11%)0000000001
26.3misc.gluco-, galacto- and mannosidases1 (0.11%)0000001000
26.3.1misc.gluco-, galacto- and mannosidases.alpha-galactosidase1 (0.11%)0000001000
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases1 (0.11%)0100000000
27.3.14RNA.regulation of transcription.CCAAT box binding factor family, HAP21 (0.11%)0000100000
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP31 (0.11%)1000000000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.11%)0000100000
27.3.52RNA.regulation of transcription.Global transcription factor group1 (0.11%)0000010000
27.3.57RNA.regulation of transcription.JUMONJI family1 (0.11%)0000000001
27.3.59RNA.regulation of transcription.Methyl binding domain proteins1 (0.11%)0000100000
27.3.62RNA.regulation of transcription.Nucleosome/chromatin assembly factor group1 (0.11%)0000100000
27.3.63RNA.regulation of transcription.PHD finger transcription factor1 (0.11%)0000100000
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family1 (0.11%)0000010000
27.3.71RNA.regulation of transcription.SNF71 (0.11%)0000100000
27.3.80RNA.regulation of transcription.zf-HD1 (0.11%)1000000000
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family1 (0.11%)0000100000
28.1.1DNA.synthesis/chromatin structure.retrotransposon/transposase1 (0.11%)0000100000
28.1.1.4DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase1 (0.11%)0000100000
28.1.3DNA.synthesis/chromatin structure.histone1 (0.11%)0000100000
28.1.3.2DNA.synthesis/chromatin structure.histone.core1 (0.11%)0000100000
28.1.3.2.3DNA.synthesis/chromatin structure.histone.core.H31 (0.11%)0000100000
28.2DNA.repair1 (0.11%)0000010000
28.99DNA.unspecified1 (0.11%)0000010000
29.2.1.1.2.1.14protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S141 (0.11%)0000000100
29.2.1.2.2.7protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L71 (0.11%)1000000000
29.3.4.2protein.targeting.secretory pathway.golgi1 (0.11%)0000100000
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.11%)0000000001
29.4.1.59protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX1 (0.11%)0000000100
29.5.1protein.degradation.subtilases1 (0.11%)0000100000
29.5.2protein.degradation.autophagy1 (0.11%)0000010000
29.5.7protein.degradation.metalloprotease1 (0.11%)0000000001
29.5.9protein.degradation.AAA type1 (0.11%)0000010000
29.6protein.folding1 (0.11%)0000000001
3.1.1minor CHO metabolism.raffinose family.galactinol synthases1 (0.11%)0000010000
3.1.1.2minor CHO metabolism.raffinose family.galactinol synthases.putative1 (0.11%)0000010000
3.2.2minor CHO metabolism.trehalose.TPP1 (0.11%)0000000100
30.2.99signalling.receptor kinases.misc1 (0.11%)0000010000
30.4.2signalling.phosphinositides.phosphatidylinositol 4-kinase1 (0.11%)0000010000
30.6signalling.MAP kinases1 (0.11%)0000000100
33.1development.storage proteins1 (0.11%)0000001000
33.3development.squamosa promoter binding like (SPL)1 (0.11%)0000000001
34.1transport.p- and v-ATPases1 (0.11%)0000010000
34.12transport.metal1 (0.11%)0000100000
34.19transport.Major Intrinsic Proteins1 (0.11%)0000010000
34.19.1transport.Major Intrinsic Proteins.PIP1 (0.11%)0000010000
7.2.2OPP.non-reductive PP.transaldolase1 (0.11%)0000010000