PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_31
Name: SPL1
Description: N/A

#Associated genes: 291
#Associated MapMan terms: 122

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	103 (35.40%)	5	6	5	31	23	14	6	13
27.3	RNA.regulation of transcription	93 (31.96%)	5	6	3	28	20	12	6	13
29	protein	20 (6.87%)	2	2	2	4	2	3	2	3
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	14 (4.81%)	0	1	0	4	5	1	2	1
27.1	RNA.processing	10 (3.44%)	0	0	2	3	3	2	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	10 (3.44%)	0	0	0	5	3	1	0	1
27.3.99	RNA.regulation of transcription.unclassified	10 (3.44%)	1	2	0	3	0	1	1	2
11	lipid metabolism	9 (3.09%)	0	0	0	3	5	0	0	1
26	misc	9 (3.09%)	1	1	1	1	1	0	3	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	9 (3.09%)	0	0	2	2	2	2	0	1
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	9 (3.09%)	1	0	0	0	4	1	1	2
29.5	protein.degradation	9 (3.09%)	1	2	0	1	0	2	1	2
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	9 (3.09%)	1	0	1	4	1	2	0	0
29.4	protein.postranslational modification	8 (2.75%)	1	0	1	3	1	1	1	0
21	redox	6 (2.06%)	0	0	1	1	2	2	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	6 (2.06%)	0	0	0	4	1	1	0	0
30	signalling	6 (2.06%)	1	2	0	1	1	1	0	0
34	transport	6 (2.06%)	0	1	1	0	1	1	0	2
9	mitochondrial electron transport / ATP synthesis	5 (1.72%)	1	0	0	1	0	0	2	1
17	hormone metabolism	5 (1.72%)	0	1	0	0	1	1	1	1
21.2	redox.ascorbate and glutathione	5 (1.72%)	0	0	1	1	1	2	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	5 (1.72%)	0	0	1	1	1	2	0	0
27.1.2	RNA.processing.RNA helicase	5 (1.72%)	0	0	1	2	1	1	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	5 (1.72%)	1	0	0	2	0	1	0	1
33	development	5 (1.72%)	0	1	1	0	0	0	1	2
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	4 (1.37%)	0	1	0	0	1	0	1	1
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	4 (1.37%)	1	0	0	1	0	0	1	1
11.3	lipid metabolism.Phospholipid synthesis	4 (1.37%)	0	0	0	3	1	0	0	0
33.3	development.squamosa promoter binding like (SPL)	4 (1.37%)	0	1	1	0	0	0	1	1
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	4 (1.37%)	1	0	0	1	0	0	1	1
20	stress	4 (1.37%)	0	0	1	0	1	1	0	1
28	DNA	4 (1.37%)	0	0	0	0	0	2	2	0
11.1	lipid metabolism.FA synthesis and FA elongation	3 (1.03%)	0	0	0	0	2	0	0	1
20.1	stress.biotic	3 (1.03%)	0	0	1	0	1	0	0	1
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	3 (1.03%)	0	1	0	1	0	1	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	3 (1.03%)	1	0	0	1	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (1.03%)	0	2	0	0	0	0	0	1
29.4.1	protein.postranslational modification.kinase	3 (1.03%)	0	0	0	2	0	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (1.03%)	0	0	0	2	0	1	0	0
31	cell	3 (1.03%)	0	0	1	0	1	0	0	1
4	glycolysis	2 (0.69%)	0	0	0	0	1	1	0	0
10	cell wall	2 (0.69%)	0	0	0	0	2	0	0	0
11.1.7	lipid metabolism.FA synthesis and FA elongation.ACP thioesterase	2 (0.69%)	0	0	0	0	2	0	0	0
11.3.8	lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase	2 (0.69%)	0	0	0	1	1	0	0	0
17.4	hormone metabolism.cytokinin	2 (0.69%)	0	0	0	0	0	1	0	1
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	2 (0.69%)	0	0	0	0	0	1	0	1
17.5	hormone metabolism.ethylene	2 (0.69%)	0	0	0	0	1	0	1	0
17.5.2	hormone metabolism.ethylene.signal transduction	2 (0.69%)	0	0	0	0	1	0	1	0
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	2 (0.69%)	0	0	1	0	0	1	0	0
26.10	misc.cytochrome P450	2 (0.69%)	0	0	0	1	0	0	1	0
26.27	misc.calcineurin-like phosphoesterase family protein	2 (0.69%)	0	0	0	0	1	0	1	0
26.7	misc.oxidases - copper, flavone etc	2 (0.69%)	1	0	0	0	0	0	1	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.69%)	0	0	0	0	1	0	1	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.69%)	0	0	0	0	0	2	0	0
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	2 (0.69%)	0	0	0	1	0	0	0	1
27.3.42	RNA.regulation of transcription.Bromodomain proteins	2 (0.69%)	0	0	0	2	0	0	0	0
27.3.54	RNA.regulation of transcription.Histone acetyltransferases	2 (0.69%)	0	0	0	0	0	0	0	2
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	2 (0.69%)	0	0	0	0	0	0	1	1
28.99	DNA.unspecified	2 (0.69%)	0	0	0	0	0	1	1	0
29.3	protein.targeting	2 (0.69%)	0	0	1	0	1	0	0	0
29.3.4	protein.targeting.secretory pathway	2 (0.69%)	0	0	1	0	1	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	2 (0.69%)	0	0	1	0	1	0	0	0
29.5.9	protein.degradation.AAA type	2 (0.69%)	0	0	0	0	0	1	1	0
4.2	glycolysis.plastid branch	2 (0.69%)	0	0	0	0	1	1	0	0
30.2	signalling.receptor kinases	2 (0.69%)	0	1	0	0	1	0	0	0
30.3	signalling.calcium	2 (0.69%)	0	0	0	1	0	1	0	0
30.5	signalling.G-proteins	2 (0.69%)	1	1	0	0	0	0	0	0
31.1	cell.organisation	2 (0.69%)	0	0	1	0	0	0	0	1
34.1	transport.p- and v-ATPases	2 (0.69%)	0	0	0	0	1	1	0	0
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	2 (0.69%)	0	0	0	0	1	1	0	0
10.6	cell wall.degradation	1 (0.34%)	0	0	0	0	1	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.34%)	0	0	0	0	1	0	0	0
10.7	cell wall.modification	1 (0.34%)	0	0	0	0	1	0	0	0
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase	1 (0.34%)	0	0	0	0	0	0	0	1
11.10	lipid metabolism.glycolipid synthesis	1 (0.34%)	0	0	0	0	1	0	0	0
11.10.1	lipid metabolism.glycolipid synthesis.MGDG synthase	1 (0.34%)	0	0	0	0	1	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.34%)	0	0	0	0	1	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.34%)	0	0	0	0	1	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.34%)	0	0	0	0	1	0	0	0
13	amino acid metabolism	1 (0.34%)	0	0	0	0	1	0	0	0
13.99	amino acid metabolism.misc	1 (0.34%)	0	0	0	0	1	0	0	0
17.2	hormone metabolism.auxin	1 (0.34%)	0	1	0	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.34%)	0	1	0	0	0	0	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.34%)	0	0	1	0	0	0	0	0
20.2	stress.abiotic	1 (0.34%)	0	0	0	0	0	1	0	0
20.2.1	stress.abiotic.heat	1 (0.34%)	0	0	0	0	0	1	0	0
21.4	redox.glutaredoxins	1 (0.34%)	0	0	0	0	1	0	0	0
22	polyamine metabolism	1 (0.34%)	0	0	0	0	1	0	0	0
22.1	polyamine metabolism.synthesis	1 (0.34%)	0	0	0	0	1	0	0	0
22.1.2	polyamine metabolism.synthesis.SAM decarboxylase	1 (0.34%)	0	0	0	0	1	0	0	0
26.14	misc.oxygenases	1 (0.34%)	0	0	0	0	0	0	1	0
26.18	misc.invertase/pectin methylesterase inhibitor family protein	1 (0.34%)	0	1	0	0	0	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.34%)	0	0	1	0	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.34%)	0	0	0	0	0	0	0	1
27.1.20	RNA.processing.degradation dicer	1 (0.34%)	0	0	0	0	0	1	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.34%)	0	0	0	0	1	0	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (0.34%)	0	0	0	0	1	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.34%)	1	0	0	0	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.34%)	0	0	0	0	0	0	1	0
27.3.36	RNA.regulation of transcription.Argonaute	1 (0.34%)	0	0	0	0	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.34%)	0	0	0	1	0	0	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.34%)	0	0	0	1	0	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.34%)	0	0	0	0	0	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.34%)	0	0	1	0	0	0	0	0
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	1 (0.34%)	0	0	0	1	0	0	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.34%)	0	0	0	0	0	1	0	0
28.2	DNA.repair	1 (0.34%)	0	0	0	0	0	0	1	0
29.1	protein.aa activation	1 (0.34%)	0	0	0	0	0	0	0	1
29.1.6	protein.aa activation.lysine-tRNA ligase	1 (0.34%)	0	0	0	0	0	0	0	1
29.2.1.1.2.2.2	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2	1 (0.34%)	0	0	0	0	0	0	1	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.34%)	0	0	0	0	1	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.34%)	0	1	0	0	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.34%)	0	1	0	0	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.34%)	0	0	0	0	1	0	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	1 (0.34%)	0	1	0	0	0	0	0	0
9.6	mitochondrial electron transport / ATP synthesis.cytochrome c	1 (0.34%)	0	0	0	0	0	0	1	0
31.4	cell.vesicle transport	1 (0.34%)	0	0	0	0	1	0	0	0
33.99	development.unspecified	1 (0.34%)	0	0	0	0	0	0	0	1
34.13	transport.peptides and oligopeptides	1 (0.34%)	0	0	0	0	0	0	0	1
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.34%)	0	0	0	0	0	0	0	1
34.4	transport.nitrate	1 (0.34%)	0	1	0	0	0	0	0	0
34.7	transport.phosphate	1 (0.34%)	0	0	1	0	0	0	0	0