PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_304
Name: AtSPL3
Description: Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains

#Associated genes: 162
#Associated MapMan terms: 109

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	41 (25.31%)	7	5	3	10	10	4	1	1
27.3	RNA.regulation of transcription	40 (24.69%)	6	5	3	10	10	4	1	1
34	transport	11 (6.79%)	1	0	1	3	2	0	1	3
29	protein	7 (4.32%)	0	2	0	1	2	1	0	1
21	redox	6 (3.70%)	3	1	0	0	1	0	0	1
21.4	redox.glutaredoxins	6 (3.70%)	3	1	0	0	1	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	6 (3.70%)	1	1	0	3	0	1	0	0
10	cell wall	5 (3.09%)	2	0	0	1	2	0	0	0
17	hormone metabolism	5 (3.09%)	0	1	1	2	1	0	0	0
20	stress	5 (3.09%)	0	1	0	1	0	1	1	1
26	misc	5 (3.09%)	1	0	1	0	1	1	1	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	5 (3.09%)	1	1	0	2	0	1	0	0
30	signalling	5 (3.09%)	1	0	0	0	1	1	1	1
33	development	5 (3.09%)	0	1	0	1	2	0	1	0
20.1	stress.biotic	4 (2.47%)	0	0	0	1	0	1	1	1
29.5	protein.degradation	4 (2.47%)	0	2	0	1	1	0	0	0
31	cell	4 (2.47%)	0	0	0	2	1	1	0	0
17.2	hormone metabolism.auxin	3 (1.85%)	0	0	1	2	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	3 (1.85%)	0	0	1	2	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	3 (1.85%)	2	1	0	0	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	3 (1.85%)	0	1	0	2	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (1.85%)	1	0	0	0	1	1	0	0
33.99	development.unspecified	3 (1.85%)	0	0	0	1	1	0	1	0
10.1	cell wall.precursor synthesis	2 (1.23%)	1	0	0	0	1	0	0	0
10.1.6	cell wall.precursor synthesis.GAE	2 (1.23%)	1	0	0	0	1	0	0	0
10.7	cell wall.modification	2 (1.23%)	0	0	0	1	1	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	2 (1.23%)	1	0	0	0	0	0	1	0
26.7	misc.oxidases - copper, flavone etc	2 (1.23%)	0	0	1	0	0	1	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (1.23%)	1	0	0	0	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	2 (1.23%)	0	0	1	0	1	0	0	0
27.3.36	RNA.regulation of transcription.Argonaute	2 (1.23%)	0	1	0	1	0	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	2 (1.23%)	0	0	0	0	1	1	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	2 (1.23%)	0	0	0	0	1	0	0	1
28	DNA	2 (1.23%)	0	0	1	0	0	1	0	0
29.4	protein.postranslational modification	2 (1.23%)	0	0	0	0	1	1	0	0
29.5.11	protein.degradation.ubiquitin	2 (1.23%)	0	1	0	1	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.23%)	0	0	0	0	0	0	0	2
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (1.23%)	0	1	0	1	0	0	0	0
30.11	signalling.light	2 (1.23%)	1	0	0	0	0	0	1	0
31.3	cell.cycle	2 (1.23%)	0	0	0	1	0	1	0	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (1.23%)	0	0	0	0	0	0	0	2
34.22	transport.cyclic nucleotide or calcium regulated channels	2 (1.23%)	1	0	1	0	0	0	0	0
34.99	transport.misc	2 (1.23%)	0	0	0	0	0	0	1	1
3	minor CHO metabolism	1 (0.62%)	0	0	0	0	0	0	0	1
10.6	cell wall.degradation	1 (0.62%)	1	0	0	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.62%)	1	0	0	0	0	0	0	0
11	lipid metabolism	1 (0.62%)	0	0	0	0	0	0	0	1
11.9	lipid metabolism.lipid degradation	1 (0.62%)	0	0	0	0	0	0	0	1
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.62%)	0	0	0	0	0	0	0	1
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.62%)	0	0	0	0	0	0	0	1
15	metal handling	1 (0.62%)	0	1	0	0	0	0	0	0
15.1	metal handling.acquisition	1 (0.62%)	0	1	0	0	0	0	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.62%)	0	1	0	0	0	0	0	0
17.3.1	hormone metabolism.brassinosteroid.synthesis-degradation	1 (0.62%)	0	1	0	0	0	0	0	0
17.3.1.2	hormone metabolism.brassinosteroid.synthesis-degradation.sterols	1 (0.62%)	0	1	0	0	0	0	0	0
17.3.1.2.6	hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7	1 (0.62%)	0	1	0	0	0	0	0	0
17.5	hormone metabolism.ethylene	1 (0.62%)	0	0	0	0	1	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (0.62%)	0	0	0	0	1	0	0	0
20.2	stress.abiotic	1 (0.62%)	0	1	0	0	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.62%)	0	1	0	0	0	0	0	0
23	nucleotide metabolism	1 (0.62%)	0	0	1	0	0	0	0	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	1 (0.62%)	0	0	1	0	0	0	0	0
23.5.3	nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase	1 (0.62%)	0	0	1	0	0	0	0	0
24	Biodegradation of Xenobiotics	1 (0.62%)	0	0	0	1	0	0	0	0
24.2	Biodegradation of Xenobiotics.lactoylglutathione lyase	1 (0.62%)	0	0	0	1	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.62%)	0	0	0	0	1	0	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	1 (0.62%)	0	0	0	0	1	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.62%)	0	0	0	0	1	0	0	0
27.3.2	RNA.regulation of transcription.Alfin-like	1 (0.62%)	0	0	1	0	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.62%)	0	0	0	0	1	0	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (0.62%)	0	0	0	0	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.62%)	0	0	0	0	1	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.62%)	0	0	0	1	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.62%)	0	0	0	1	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.62%)	0	0	0	0	0	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	1 (0.62%)	0	0	1	0	0	0	0	0
27.4	RNA.RNA binding	1 (0.62%)	1	0	0	0	0	0	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.62%)	0	0	1	0	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.62%)	0	0	1	0	0	0	0	0
28.99	DNA.unspecified	1 (0.62%)	0	0	0	0	0	1	0	0
29.2.1.1.1.1.4	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4	1 (0.62%)	0	0	0	0	0	0	0	1
29.2.1.1.1.1.7	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7	1 (0.62%)	0	1	0	0	0	0	0	0
29.2.1.1.2.2.2	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2	1 (0.62%)	0	0	0	0	0	0	1	0
29.3	protein.targeting	1 (0.62%)	0	0	0	0	0	0	0	1
29.3.4	protein.targeting.secretory pathway	1 (0.62%)	0	0	0	0	0	0	0	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.62%)	0	0	0	0	0	0	0	1
29.4.1	protein.postranslational modification.kinase	1 (0.62%)	0	0	0	0	1	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.62%)	0	0	0	0	1	0	0	0
29.5.11.1	protein.degradation.ubiquitin.ubiquitin	1 (0.62%)	0	1	0	0	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.62%)	0	0	0	1	0	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.62%)	0	1	0	0	0	0	0	0
3.4	minor CHO metabolism.myo-inositol	1 (0.62%)	0	0	0	0	0	0	0	1
3.4.4	minor CHO metabolism.myo-inositol.myo inositol oxygenases	1 (0.62%)	0	0	0	0	0	0	0	1
30.11.1	signalling.light.COP9 signalosome	1 (0.62%)	0	0	0	0	0	0	1	0
30.2	signalling.receptor kinases	1 (0.62%)	0	0	0	0	0	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.62%)	0	0	0	0	0	1	0	0
30.3	signalling.calcium	1 (0.62%)	0	0	0	0	1	0	0	0
30.6	signalling.MAP kinases	1 (0.62%)	0	0	0	0	0	0	0	1
31.1	cell.organisation	1 (0.62%)	0	0	0	1	0	0	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.62%)	0	0	0	1	0	0	0	0
31.4	cell.vesicle transport	1 (0.62%)	0	0	0	0	1	0	0	0
33.1	development.storage proteins	1 (0.62%)	0	1	0	0	0	0	0	0
33.2	development.late embryogenesis abundant	1 (0.62%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.62%)	0	0	0	1	0	0	0	0
34.12	transport.metal	1 (0.62%)	0	0	0	0	1	0	0	0
34.14	transport.unspecified cations	1 (0.62%)	0	0	0	1	0	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.62%)	0	0	0	0	1	0	0	0
34.19.3	transport.Major Intrinsic Proteins.NIP	1 (0.62%)	0	0	0	0	1	0	0	0
34.3	transport.amino acids	1 (0.62%)	0	0	0	1	0	0	0	0