PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_271
Name: AT3G16350
Description: N/A

#Associated genes: 740
#Associated MapMan terms: 206

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	96 (12.97%)	8	9	6	26	19	9	8	11
27.3	RNA.regulation of transcription	66 (8.92%)	5	7	3	17	16	5	5	8
1	PS	55 (7.43%)	4	6	11	8	10	7	3	6
29	protein	54 (7.30%)	1	8	1	15	10	6	5	8
1.1	PS.lightreaction	49 (6.62%)	3	6	11	6	10	6	2	5
1.1.2	PS.lightreaction.photosystem I	30 (4.05%)	2	5	5	3	5	4	1	5
33	development	26 (3.51%)	3	4	2	6	3	4	1	3
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	25 (3.38%)	2	5	5	2	3	3	1	4
30	signalling	22 (2.97%)	0	3	3	4	3	2	2	5
33.99	development.unspecified	22 (2.97%)	3	4	1	5	2	4	1	2
29.4	protein.postranslational modification	20 (2.70%)	0	1	1	7	3	2	2	4
28	DNA	18 (2.43%)	0	0	0	8	3	2	1	4
17	hormone metabolism	17 (2.30%)	1	1	1	7	2	2	1	2
27.4	RNA.RNA binding	17 (2.30%)	1	1	3	2	2	3	3	2
21	redox	14 (1.89%)	3	2	5	2	0	0	0	2
31	cell	14 (1.89%)	1	2	0	3	1	3	3	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	13 (1.76%)	2	0	2	1	2	3	1	2
17.2	hormone metabolism.auxin	12 (1.62%)	0	1	0	5	2	1	1	2
28.1	DNA.synthesis/chromatin structure	12 (1.62%)	0	0	0	6	2	1	1	2
29.5	protein.degradation	12 (1.62%)	0	2	0	5	1	2	2	0
26	misc	11 (1.49%)	1	0	2	0	4	0	2	2
13	amino acid metabolism	10 (1.35%)	1	0	2	0	2	2	1	2
1.1.3	PS.lightreaction.cytochrome b6/f	9 (1.22%)	0	1	3	2	2	1	0	0
3	minor CHO metabolism	9 (1.22%)	0	0	1	2	0	2	1	3
20	stress	9 (1.22%)	0	2	1	3	0	0	2	1
20.2	stress.abiotic	9 (1.22%)	0	2	1	3	0	0	2	1
27.1	RNA.processing	9 (1.22%)	2	1	0	3	1	1	0	1
21.1	redox.thioredoxin	8 (1.08%)	2	0	3	2	0	0	0	1
30.2	signalling.receptor kinases	8 (1.08%)	0	1	0	1	2	2	0	2
1.1.1	PS.lightreaction.photosystem II	7 (0.95%)	1	0	2	1	2	1	0	0
10	cell wall	7 (0.95%)	0	0	0	5	0	1	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	7 (0.95%)	0	1	0	2	2	0	1	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	7 (0.95%)	0	0	0	2	0	1	1	3
27.3.99	RNA.regulation of transcription.unclassified	7 (0.95%)	1	0	0	1	2	1	2	0
29.2	protein.synthesis	7 (0.95%)	0	1	0	3	2	1	0	0
29.3	protein.targeting	7 (0.95%)	1	1	0	0	3	1	0	1
29.6	protein.folding	7 (0.95%)	0	3	0	0	0	0	1	3
31.1	cell.organisation	7 (0.95%)	0	0	0	2	0	2	2	1
34	transport	7 (0.95%)	0	1	1	1	1	1	0	2
1.3	PS.calvin cycle	6 (0.81%)	1	0	0	2	0	1	1	1
11	lipid metabolism	6 (0.81%)	3	1	0	1	0	1	0	0
21.6	redox.dismutases and catalases	6 (0.81%)	1	2	2	0	0	0	0	1
29.2.3	protein.synthesis.initiation	6 (0.81%)	0	1	0	3	2	0	0	0
29.3.3	protein.targeting.chloroplast	6 (0.81%)	1	1	0	0	2	1	0	1
1.1.2.1	PS.lightreaction.photosystem I.LHC-I	5 (0.68%)	0	0	0	1	2	1	0	1
1.1.3.4	PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)	5 (0.68%)	0	0	3	0	2	0	0	0
13.2	amino acid metabolism.degradation	5 (0.68%)	0	0	1	0	1	2	0	1
17.2.2	hormone metabolism.auxin.signal transduction	5 (0.68%)	0	0	0	3	0	1	0	1
27.1.2	RNA.processing.RNA helicase	5 (0.68%)	1	1	0	1	1	0	0	1
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	5 (0.68%)	2	2	0	0	0	0	0	1
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	5 (0.68%)	0	0	0	4	0	0	0	1
30.2.17	signalling.receptor kinases.DUF 26	5 (0.68%)	0	0	0	0	1	2	0	2
30.5	signalling.G-proteins	5 (0.68%)	0	0	1	2	0	0	1	1
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	4 (0.54%)	1	0	1	0	2	0	0	0
10.6	cell wall.degradation	4 (0.54%)	0	0	0	2	0	1	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	4 (0.54%)	0	0	0	2	0	1	0	1
13.1	amino acid metabolism.synthesis	4 (0.54%)	1	0	1	0	0	0	1	1
19	tetrapyrrole synthesis	4 (0.54%)	1	1	0	1	1	0	0	0
20.2.3	stress.abiotic.drought/salt	4 (0.54%)	0	0	1	1	0	0	2	0
27.2	RNA.transcription	4 (0.54%)	0	0	0	4	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	4 (0.54%)	0	1	1	0	1	0	0	1
27.3.29	RNA.regulation of transcription.TCP transcription factor family	4 (0.54%)	0	1	0	3	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	4 (0.54%)	0	1	0	1	1	0	0	1
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	4 (0.54%)	0	0	0	2	2	0	0	0
29.5.11	protein.degradation.ubiquitin	4 (0.54%)	0	2	0	1	0	1	0	0
29.5.5	protein.degradation.serine protease	4 (0.54%)	0	0	0	2	0	1	1	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	3 (0.41%)	0	0	1	1	0	1	0	0
1.1.3.1	PS.lightreaction.cytochrome b6/f.iron sulfur subunit	3 (0.41%)	0	0	0	2	0	1	0	0
1.3.13	PS.calvin cycle.rubisco interacting	3 (0.41%)	1	0	0	0	0	0	1	1
1.3.7	PS.calvin cycle.FBPase	3 (0.41%)	0	0	0	2	0	1	0	0
11.2	lipid metabolism.FA desaturation	3 (0.41%)	1	1	0	1	0	0	0	0
11.2.1	lipid metabolism.FA desaturation.desaturase	3 (0.41%)	1	1	0	1	0	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	3 (0.41%)	1	0	1	0	0	0	0	1
13.1.6.1	amino acid metabolism.synthesis.aromatic aa.chorismate	3 (0.41%)	1	0	1	0	0	0	0	1
13.1.6.1.5	amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase	3 (0.41%)	1	0	1	0	0	0	0	1
13.2.3	amino acid metabolism.degradation.aspartate family	3 (0.41%)	0	0	0	0	1	1	0	1
15	metal handling	3 (0.41%)	0	0	0	1	1	0	0	1
15.2	metal handling.binding, chelation and storage	3 (0.41%)	0	0	0	1	1	0	0	1
17.4	hormone metabolism.cytokinin	3 (0.41%)	0	0	0	2	0	1	0	0
17.4.2	hormone metabolism.cytokinin.signal transduction	3 (0.41%)	0	0	0	2	0	1	0	0
18	Co-factor and vitamine metabolism	3 (0.41%)	0	1	1	0	0	0	1	0
18.5	Co-factor and vitamine metabolism.folate & vitamine K	3 (0.41%)	0	1	1	0	0	0	1	0
18.5.2	Co-factor and vitamine metabolism.folate & vitamine K.vitamine K	3 (0.41%)	0	1	1	0	0	0	1	0
19.40	tetrapyrrole synthesis.regulation	3 (0.41%)	1	0	0	1	1	0	0	0
26.28	misc.GDSL-motif lipase	3 (0.41%)	0	0	2	0	0	0	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	3 (0.41%)	0	0	0	2	0	1	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	3 (0.41%)	0	0	0	3	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	3 (0.41%)	1	0	0	0	1	0	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	3 (0.41%)	0	0	0	0	2	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (0.41%)	0	0	1	0	1	0	1	0
29.2.1.1.1.2.19	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19	3 (0.41%)	1	1	0	0	0	0	0	1
29.4.1	protein.postranslational modification.kinase	3 (0.41%)	0	1	0	0	0	0	0	2
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (0.41%)	0	1	0	0	0	0	0	2
3.2	minor CHO metabolism.trehalose	3 (0.41%)	0	0	0	0	0	1	1	1
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	3 (0.41%)	0	0	0	0	0	1	1	1
3.5	minor CHO metabolism.others	3 (0.41%)	0	0	0	1	0	1	0	1
3.7	minor CHO metabolism.sugar kinases	3 (0.41%)	0	0	1	1	0	0	0	1
28.2	DNA.repair	3 (0.41%)	0	0	0	0	1	1	0	1
28.99	DNA.unspecified	3 (0.41%)	0	0	0	2	0	0	0	1
30.11	signalling.light	3 (0.41%)	0	0	2	0	1	0	0	0
30.3	signalling.calcium	3 (0.41%)	0	1	0	1	0	0	0	1
31.3	cell.cycle	3 (0.41%)	1	1	0	0	0	0	1	0
31.4	cell.vesicle transport	3 (0.41%)	0	0	0	1	1	1	0	0
10.5	cell wall.cell wall proteins	2 (0.27%)	0	0	0	2	0	0	0	0
10.5.1	cell wall.cell wall proteins.AGPs	2 (0.27%)	0	0	0	2	0	0	0	0
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	2 (0.27%)	0	0	0	2	0	0	0	0
11.6	lipid metabolism.lipid transfer proteins etc	2 (0.27%)	2	0	0	0	0	0	0	0
13.2.3.4	amino acid metabolism.degradation.aspartate family.methionine	2 (0.27%)	0	0	0	0	0	1	0	1
16	secondary metabolism	2 (0.27%)	0	0	0	0	1	0	0	1
18.5.2.8	Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase	2 (0.27%)	0	1	1	0	0	0	0	0
18.5.2.8.1	Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO	2 (0.27%)	0	1	1	0	0	0	0	0
20.2.1	stress.abiotic.heat	2 (0.27%)	0	1	0	0	0	0	0	1
26.23	misc.rhodanese	2 (0.27%)	0	0	0	0	0	0	1	1
27.1.1	RNA.processing.splicing	2 (0.27%)	1	0	0	0	0	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.27%)	0	2	0	0	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.27%)	0	0	0	1	1	0	0	0
27.3.46	RNA.regulation of transcription.DNA methyltransferases	2 (0.27%)	1	0	0	0	1	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	2 (0.27%)	0	0	0	0	1	0	0	1
28.1.3	DNA.synthesis/chromatin structure.histone	2 (0.27%)	0	0	0	1	0	0	0	1
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	2 (0.27%)	0	0	0	1	0	0	0	1
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	2 (0.27%)	0	0	0	1	0	0	0	1
29.2.1.1.1.1.13	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13	2 (0.27%)	1	1	0	0	0	0	0	0
29.2.1.1.3.2.1712	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L7/L12	2 (0.27%)	0	0	0	0	0	0	1	1
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	2 (0.27%)	0	0	0	1	0	1	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	2 (0.27%)	0	0	0	0	0	0	1	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.27%)	0	0	0	1	1	0	0	0
30.4	signalling.phosphinositides	2 (0.27%)	0	1	0	0	0	0	0	1
31.3.1	cell.cycle.peptidylprolyl isomerase	2 (0.27%)	1	1	0	0	0	0	0	0
33.1	development.storage proteins	2 (0.27%)	0	0	0	0	1	0	0	1
33.2	development.late embryogenesis abundant	2 (0.27%)	0	0	1	1	0	0	0	0
34.19	transport.Major Intrinsic Proteins	2 (0.27%)	0	0	1	0	0	0	0	1
34.19.2	transport.Major Intrinsic Proteins.TIP	2 (0.27%)	0	0	1	0	0	0	0	1
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.14%)	0	0	0	0	0	0	1	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.14%)	0	0	0	0	1	0	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	1 (0.14%)	0	0	0	0	1	0	0	0
1.1.6	PS.lightreaction.NADH DH	1 (0.14%)	0	0	1	0	0	0	0	0
2	major CHO metabolism	1 (0.14%)	0	0	0	1	0	0	0	0
6	gluconeogenesis / glyoxylate cycle	1 (0.14%)	0	0	0	0	1	0	0	0
10.7	cell wall.modification	1 (0.14%)	0	0	0	1	0	0	0	0
11.10	lipid metabolism.glycolipid synthesis	1 (0.14%)	0	0	0	0	0	1	0	0
11.10.2	lipid metabolism.glycolipid synthesis.DGDG synthase	1 (0.14%)	0	0	0	0	0	1	0	0
13.1.5	amino acid metabolism.synthesis.serine-glycine-cysteine group	1 (0.14%)	0	0	0	0	0	0	1	0
13.1.5.3	amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine	1 (0.14%)	0	0	0	0	0	0	1	0
13.2.2	amino acid metabolism.degradation.glutamate family	1 (0.14%)	0	0	0	0	0	1	0	0
13.2.2.3	amino acid metabolism.degradation.glutamate family.arginine	1 (0.14%)	0	0	0	0	0	1	0	0
13.2.3.5	amino acid metabolism.degradation.aspartate family.lysine	1 (0.14%)	0	0	0	0	1	0	0	0
13.2.3.5.1	mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase	1 (0.14%)	0	0	0	0	1	0	0	0
13.2.4	amino acid metabolism.degradation.branched chain group	1 (0.14%)	0	0	1	0	0	0	0	0
13.2.4.4	amino acid metabolism.degradation.branched chain group.leucine	1 (0.14%)	0	0	1	0	0	0	0	0
13.99	amino acid metabolism.misc	1 (0.14%)	0	0	0	0	1	0	0	0
16.1	secondary metabolism.isoprenoids	1 (0.14%)	0	0	0	0	1	0	0	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	1 (0.14%)	0	0	0	0	1	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.14%)	0	0	0	0	0	0	0	1
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.14%)	0	0	0	0	0	0	0	1
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	1 (0.14%)	0	0	0	0	0	0	0	1
17.1	hormone metabolism.abscisic acid	1 (0.14%)	0	0	1	0	0	0	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	1 (0.14%)	0	0	1	0	0	0	0	0
2.2	major CHO metabolism.degradation	1 (0.14%)	0	0	0	1	0	0	0	0
17.6	hormone metabolism.gibberelin	1 (0.14%)	1	0	0	0	0	0	0	0
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.14%)	1	0	0	0	0	0	0	0
18.5.2.10	2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO	1 (0.14%)	0	0	0	0	0	0	1	0
19.12	tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase	1 (0.14%)	0	1	0	0	0	0	0	0
2.2.2	major CHO metabolism.degradation.starch	1 (0.14%)	0	0	0	1	0	0	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	1 (0.14%)	0	0	0	1	0	0	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	1 (0.14%)	0	0	0	1	0	0	0	0
22	polyamine metabolism	1 (0.14%)	0	0	0	0	0	1	0	0
22.1	polyamine metabolism.synthesis	1 (0.14%)	0	0	0	0	0	1	0	0
22.1.3	polyamine metabolism.synthesis.arginine decarboxylase	1 (0.14%)	0	0	0	0	0	1	0	0
23	nucleotide metabolism	1 (0.14%)	0	0	0	1	0	0	0	0
23.2	nucleotide metabolism.degradation	1 (0.14%)	0	0	0	1	0	0	0	0
23.2.1	nucleotide metabolism.degradation.pyrimidine	1 (0.14%)	0	0	0	1	0	0	0	0
23.2.1.2	nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase	1 (0.14%)	0	0	0	1	0	0	0	0
26.10	misc.cytochrome P450	1 (0.14%)	1	0	0	0	0	0	0	0
26.1	misc.misc2	1 (0.14%)	0	0	0	0	1	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.14%)	0	0	0	0	1	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.14%)	0	0	0	0	1	0	0	0
26.6	misc.O-methyl transferases	1 (0.14%)	0	0	0	0	1	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.14%)	0	0	0	0	0	0	1	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.14%)	0	0	0	0	0	1	0	0
27.3.5	RNA.regulation of transcription.ARR	1 (0.14%)	0	0	1	0	0	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	1 (0.14%)	0	0	0	0	1	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.14%)	0	0	0	0	0	1	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.14%)	0	0	0	0	1	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.14%)	0	0	0	0	1	0	0	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	1 (0.14%)	0	0	0	1	0	0	0	0
29.2.1.1.1.1.31	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S31	1 (0.14%)	0	0	1	0	0	0	0	0
29.2.1.1.1.1.530	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A	1 (0.14%)	0	1	0	0	0	0	0	0
29.2.1.1.1.2.18	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18	1 (0.14%)	0	1	0	0	0	0	0	0
29.2.1.1.1.2.5	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5	1 (0.14%)	0	0	0	0	0	0	0	1
29.2.4	protein.synthesis.elongation	1 (0.14%)	0	0	0	0	0	1	0	0
29.3.99	protein.targeting.unknown	1 (0.14%)	0	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.14%)	0	0	0	0	1	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.14%)	0	0	0	1	0	0	0	0
29.8	protein.assembly and cofactor ligation	1 (0.14%)	0	0	0	0	1	0	0	0
30.2.99	signalling.receptor kinases.misc	1 (0.14%)	0	1	0	0	0	0	0	0
30.4.3	signalling.phosphinositides.bis(5-nucleosyl)-tetraphosphatase	1 (0.14%)	0	0	0	0	0	0	0	1
6.3	gluconeogenesis / glyoxylate cycle.Malate DH	1 (0.14%)	0	0	0	0	1	0	0	0
30.9	signalling.lipids	1 (0.14%)	0	0	0	0	0	0	1	0
31.2	cell.division	1 (0.14%)	0	1	0	0	0	0	0	0
34.11	transport.NDP-sugars at the ER	1 (0.14%)	0	1	0	0	0	0	0	0
34.12	transport.metal	1 (0.14%)	0	0	0	1	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.14%)	0	0	0	0	0	1	0	0
34.2	transport.sugars	1 (0.14%)	0	0	0	0	1	0	0	0
34.99	transport.misc	1 (0.14%)	0	0	0	0	0	0	0	1