PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_231
Name: HDG2;HDG3;ATML1;HB-7
Description: N/A

#Associated genes: 195
#Associated MapMan terms: 120

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	39 (20.00%)	1	2	1	18	7	3	5	2
27.3	RNA.regulation of transcription	36 (18.46%)	1	2	1	18	6	2	4	2
29	protein	25 (12.82%)	2	1	0	10	4	0	4	4
29.4	protein.postranslational modification	11 (5.64%)	1	1	0	4	1	0	1	3
26	misc	8 (4.10%)	1	1	2	2	0	0	1	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	8 (4.10%)	0	1	0	3	2	1	1	0
30	signalling	8 (4.10%)	0	0	0	7	0	0	1	0
33	development	7 (3.59%)	1	0	0	4	1	1	0	0
33.99	development.unspecified	7 (3.59%)	1	0	0	4	1	1	0	0
29.3	protein.targeting	6 (3.08%)	0	0	0	2	3	0	1	0
29.5	protein.degradation	6 (3.08%)	1	0	0	3	0	0	2	0
31	cell	6 (3.08%)	1	1	0	2	0	0	0	2
34	transport	6 (3.08%)	0	1	2	3	0	0	0	0
3	minor CHO metabolism	5 (2.56%)	0	0	1	1	0	0	0	3
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	4 (2.05%)	0	0	0	3	0	1	0	0
29.5.3	protein.degradation.cysteine protease	4 (2.05%)	1	0	0	2	0	0	1	0
3.1	minor CHO metabolism.raffinose family	4 (2.05%)	0	0	1	0	0	0	0	3
12.2	N-metabolism.ammonia metabolism	4 (2.05%)	0	0	0	3	0	1	0	0
3.1.1	minor CHO metabolism.raffinose family.galactinol synthases	4 (2.05%)	0	0	1	0	0	0	0	3
3.1.1.2	minor CHO metabolism.raffinose family.galactinol synthases.putative	4 (2.05%)	0	0	1	0	0	0	0	3
12	N-metabolism	4 (2.05%)	0	0	0	3	0	1	0	0
31.1	cell.organisation	4 (2.05%)	0	1	0	2	0	0	0	1
10	cell wall	3 (1.54%)	0	0	0	1	0	1	0	1
21	redox	3 (1.54%)	0	0	0	3	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	3 (1.54%)	1	0	1	0	0	0	0	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	3 (1.54%)	0	0	0	3	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	3 (1.54%)	0	0	0	0	1	0	2	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	3 (1.54%)	0	0	0	3	0	0	0	0
28	DNA	3 (1.54%)	0	0	0	3	0	0	0	0
29.3.1	protein.targeting.nucleus	3 (1.54%)	0	0	0	1	1	0	1	0
29.3.4	protein.targeting.secretory pathway	3 (1.54%)	0	0	0	1	2	0	0	0
29.3.4.3	protein.targeting.secretory pathway.vacuole	3 (1.54%)	0	0	0	1	2	0	0	0
30.3	signalling.calcium	3 (1.54%)	0	0	0	3	0	0	0	0
30.5	signalling.G-proteins	3 (1.54%)	0	0	0	2	0	0	1	0
20	stress	2 (1.03%)	0	0	1	1	0	0	0	0
20.2	stress.abiotic	2 (1.03%)	0	0	1	1	0	0	0	0
20.2.1	stress.abiotic.heat	2 (1.03%)	0	0	1	1	0	0	0	0
21.2	redox.ascorbate and glutathione	2 (1.03%)	0	0	0	2	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	2 (1.03%)	0	0	0	2	0	0	0	0
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	2 (1.03%)	0	0	0	2	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (1.03%)	0	1	0	1	0	0	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	2 (1.03%)	1	0	0	0	0	0	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	2 (1.03%)	0	0	0	0	0	0	1	1
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (1.03%)	0	0	0	2	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (1.03%)	0	0	0	1	0	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	2 (1.03%)	0	0	0	1	1	0	0	0
28.1	DNA.synthesis/chromatin structure	2 (1.03%)	0	0	0	2	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.03%)	0	0	1	0	0	0	0	1
30.2	signalling.receptor kinases	2 (1.03%)	0	0	0	2	0	0	0	0
34.99	transport.misc	2 (1.03%)	0	0	0	2	0	0	0	0
3.2	minor CHO metabolism.trehalose	1 (0.51%)	0	0	0	1	0	0	0	0
10.5	cell wall.cell wall proteins	1 (0.51%)	0	0	0	0	0	0	0	1
10.5.1	cell wall.cell wall proteins.AGPs	1 (0.51%)	0	0	0	0	0	0	0	1
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	1 (0.51%)	0	0	0	0	0	0	0	1
10.7	cell wall.modification	1 (0.51%)	0	0	0	1	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.51%)	0	0	0	0	0	1	0	0
10.8.2	cell wall.pectin*esterases.acetyl esterase	1 (0.51%)	0	0	0	0	0	1	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.51%)	0	0	0	1	0	0	0	0
11	lipid metabolism	1 (0.51%)	0	0	0	1	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.51%)	0	0	0	1	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.51%)	0	0	0	1	0	0	0	0
11.9.3.2	lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase	1 (0.51%)	0	0	0	1	0	0	0	0
13	amino acid metabolism	1 (0.51%)	0	0	0	0	0	0	1	0
13.1	amino acid metabolism.synthesis	1 (0.51%)	0	0	0	0	0	0	1	0
13.1.1.3.11	amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase	1 (0.51%)	0	0	0	1	0	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.51%)	0	0	0	0	0	0	1	0
13.1.6.5	amino acid metabolism.synthesis.aromatic aa.tryptophan	1 (0.51%)	0	0	0	0	0	0	1	0
13.1.6.5.1	amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase	1 (0.51%)	0	0	0	0	0	0	1	0
14	S-assimilation	1 (0.51%)	0	1	0	0	0	0	0	0
14.3	S-assimilation.sulfite redox	1 (0.51%)	0	1	0	0	0	0	0	0
17	hormone metabolism	1 (0.51%)	0	0	0	0	0	0	0	1
17.1	hormone metabolism.abscisic acid	1 (0.51%)	0	0	0	0	0	0	0	1
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	1 (0.51%)	0	0	0	0	0	0	0	1
18	Co-factor and vitamine metabolism	1 (0.51%)	0	0	0	0	0	1	0	0
18.3	Co-factor and vitamine metabolism.riboflavin	1 (0.51%)	0	0	0	0	0	1	0	0
18.3.1	Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II	1 (0.51%)	0	0	0	0	0	1	0	0
21.4	redox.glutaredoxins	1 (0.51%)	0	0	0	1	0	0	0	0
22	polyamine metabolism	1 (0.51%)	0	0	0	0	0	1	0	0
22.2	polyamine metabolism.degradation	1 (0.51%)	0	0	0	0	0	1	0	0
22.2.1	polyamine metabolism.degradation.polyamin oxidase	1 (0.51%)	0	0	0	0	0	1	0	0
23	nucleotide metabolism	1 (0.51%)	0	0	0	1	0	0	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.51%)	0	0	0	1	0	0	0	0
23.4.3	nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase	1 (0.51%)	0	0	0	1	0	0	0	0
26.12	misc.peroxidases	1 (0.51%)	0	0	0	0	0	0	1	0
26.28	misc.GDSL-motif lipase	1 (0.51%)	0	0	1	0	0	0	0	0
26.3.1	misc.gluco-, galacto- and mannosidases.alpha-galactosidase	1 (0.51%)	0	0	1	0	0	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.51%)	0	0	0	1	0	0	0	0
27.1	RNA.processing	1 (0.51%)	0	0	0	0	1	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.51%)	0	0	0	0	1	0	0	0
27.2	RNA.transcription	1 (0.51%)	0	0	0	0	0	0	1	0
27.3.13	RNA.regulation of transcription.CCAAT box binding factor family, DR1	1 (0.51%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.51%)	0	0	0	1	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.51%)	1	0	0	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.51%)	0	0	1	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.51%)	0	0	0	0	1	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.51%)	0	0	0	0	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.51%)	0	0	0	1	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	1 (0.51%)	0	1	0	0	0	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.51%)	0	0	0	1	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.51%)	0	0	0	1	0	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	1 (0.51%)	0	0	0	0	0	0	0	1
27.4	RNA.RNA binding	1 (0.51%)	0	0	0	0	0	1	0	0
28.99	DNA.unspecified	1 (0.51%)	0	0	0	1	0	0	0	0
29.1	protein.aa activation	1 (0.51%)	0	0	0	1	0	0	0	0
29.2	protein.synthesis	1 (0.51%)	0	0	0	0	0	0	0	1
29.2.3	protein.synthesis.initiation	1 (0.51%)	0	0	0	0	0	0	0	1
29.4.1	protein.postranslational modification.kinase	1 (0.51%)	0	0	0	0	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.51%)	0	0	0	0	0	0	0	1
29.5.1	protein.degradation.subtilases	1 (0.51%)	0	0	0	0	0	0	1	0
29.5.11	protein.degradation.ubiquitin	1 (0.51%)	0	0	0	1	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.51%)	0	0	0	1	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.51%)	0	0	1	0	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.51%)	0	0	0	1	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.51%)	0	0	0	1	0	0	0	0
31.2	cell.division	1 (0.51%)	1	0	0	0	0	0	0	0
31.3	cell.cycle	1 (0.51%)	0	0	0	0	0	0	0	1
34.15	transport.potassium	1 (0.51%)	0	0	1	0	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.51%)	0	0	1	0	0	0	0	0
34.22	transport.cyclic nucleotide or calcium regulated channels	1 (0.51%)	0	0	0	1	0	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.51%)	0	1	0	0	0	0	0	0