PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_210
Name: ARR1
Description: N/A

#Associated genes: 274
#Associated MapMan terms: 129

Show species without binding site experiments

Click table-header(s) to enable sorting

MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	47 (17.15%)	4	5	1	14	2	6	5	10
27.3	RNA.regulation of transcription	43 (15.69%)	3	5	1	13	2	6	4	9
29	protein	24 (8.76%)	2	6	3	4	1	3	0	5
29.4	protein.postranslational modification	17 (6.20%)	1	5	2	4	0	1	0	4
34	transport	16 (5.84%)	1	4	0	3	7	1	0	0
31	cell	12 (4.38%)	2	1	0	1	1	2	2	3
28	DNA	11 (4.01%)	1	2	0	2	2	1	3	0
30	signalling	11 (4.01%)	0	1	2	0	2	2	0	4
33	development	11 (4.01%)	1	0	0	2	5	1	0	2
28.1	DNA.synthesis/chromatin structure	10 (3.65%)	1	2	0	2	2	0	3	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	10 (3.65%)	1	2	1	1	4	0	0	1
33.99	development.unspecified	10 (3.65%)	1	0	0	2	4	1	0	2
23	nucleotide metabolism	8 (2.92%)	0	3	0	4	0	0	0	1
17	hormone metabolism	7 (2.55%)	0	1	0	3	0	1	1	1
23.2	nucleotide metabolism.degradation	7 (2.55%)	0	3	0	3	0	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	7 (2.55%)	0	0	1	2	0	1	1	2
26	misc	6 (2.19%)	0	0	2	0	1	2	1	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	5 (1.82%)	0	0	0	3	0	1	1	0
30.11	signalling.light	5 (1.82%)	0	0	2	0	1	2	0	0
31.2	cell.division	5 (1.82%)	1	1	0	1	1	1	0	0
31.3	cell.cycle	5 (1.82%)	1	0	0	0	0	0	2	2
27.3.5	RNA.regulation of transcription.ARR	4 (1.46%)	0	0	0	2	2	0	0	0
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	4 (1.46%)	1	2	0	0	0	0	1	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	4 (1.46%)	0	0	0	0	2	1	0	1
34.99	transport.misc	4 (1.46%)	0	0	0	2	1	1	0	0
2	major CHO metabolism	3 (1.09%)	1	0	0	1	0	0	1	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	3 (1.09%)	0	0	0	2	0	0	1	0
2.2	major CHO metabolism.degradation	3 (1.09%)	1	0	0	1	0	0	1	0
17.8	hormone metabolism.salicylic acid	3 (1.09%)	0	0	0	2	0	0	1	0
2.2.2	major CHO metabolism.degradation.starch	3 (1.09%)	1	0	0	1	0	0	1	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (1.09%)	1	0	0	1	0	0	1	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (1.09%)	1	0	0	1	0	0	1	0
8	TCA / org transformation	3 (1.09%)	0	0	0	1	0	1	1	0
11	lipid metabolism	3 (1.09%)	0	0	0	1	0	1	0	1
15	metal handling	3 (1.09%)	0	1	0	0	0	1	1	0
27.1	RNA.processing	3 (1.09%)	0	0	0	1	0	0	1	1
29.3	protein.targeting	3 (1.09%)	1	1	0	0	0	1	0	0
29.3.4	protein.targeting.secretory pathway	3 (1.09%)	1	1	0	0	0	1	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	3 (1.09%)	1	1	0	0	0	1	0	0
10	cell wall	2 (0.73%)	0	0	1	0	0	0	0	1
10.6	cell wall.degradation	2 (0.73%)	0	0	1	0	0	0	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	2 (0.73%)	0	0	1	0	0	0	0	1
11.1	lipid metabolism.FA synthesis and FA elongation	2 (0.73%)	0	0	0	0	0	1	0	1
14	S-assimilation	2 (0.73%)	0	0	0	0	0	1	0	1
14.1	S-assimilation.ATPS	2 (0.73%)	0	0	0	0	0	1	0	1
15.1	metal handling.acquisition	2 (0.73%)	0	0	0	0	0	1	1	0
17.4	hormone metabolism.cytokinin	2 (0.73%)	0	0	0	1	0	0	0	1
26.7	misc.oxidases - copper, flavone etc	2 (0.73%)	0	0	0	0	0	1	1	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.73%)	0	0	0	0	0	1	0	1
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	2 (0.73%)	0	1	0	0	0	0	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	2 (0.73%)	1	0	0	0	0	1	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.73%)	0	0	0	2	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.73%)	0	0	0	2	0	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (0.73%)	0	0	0	0	0	1	0	1
28.1.3	DNA.synthesis/chromatin structure.histone	2 (0.73%)	0	1	0	0	1	0	0	0
29.5	protein.degradation	2 (0.73%)	0	0	1	0	1	0	0	0
29.5.9	protein.degradation.AAA type	2 (0.73%)	0	0	1	0	1	0	0	0
29.7	protein.glycosylation	2 (0.73%)	0	0	0	0	0	1	0	1
30.3	signalling.calcium	2 (0.73%)	0	1	0	0	0	0	0	1
30.5	signalling.G-proteins	2 (0.73%)	0	0	0	0	0	0	0	2
31.1	cell.organisation	2 (0.73%)	0	0	0	0	0	1	0	1
31.3.1	cell.cycle.peptidylprolyl isomerase	2 (0.73%)	1	0	0	0	0	0	1	0
8.2	TCA / org transformation.other organic acid transformations	2 (0.73%)	0	0	0	0	0	1	1	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (0.73%)	1	0	0	0	1	0	0	0
34.2	transport.sugars	2 (0.73%)	0	0	0	0	2	0	0	0
34.7	transport.phosphate	2 (0.73%)	0	0	0	0	2	0	0	0
8.2.11	TCA / org transformation.other organic acid transformatons.atp-citrate lyase	2 (0.73%)	0	0	0	0	0	1	1	0
1	PS	1 (0.36%)	0	0	0	0	0	0	1	0
1.1	PS.lightreaction	1 (0.36%)	0	0	0	0	0	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.36%)	0	0	0	0	0	0	1	0
4	glycolysis	1 (0.36%)	0	0	0	0	0	0	0	1
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase	1 (0.36%)	0	0	0	0	0	0	0	1
11.1.13	lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein	1 (0.36%)	0	0	0	0	0	1	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.36%)	0	0	0	1	0	0	0	0
11.8.3	lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase	1 (0.36%)	0	0	0	1	0	0	0	0
4.2	glycolysis.plastid branch	1 (0.36%)	0	0	0	0	0	0	0	1
8.1	TCA / org transformation.TCA	1 (0.36%)	0	0	0	1	0	0	0	0
15.2	metal handling.binding, chelation and storage	1 (0.36%)	0	1	0	0	0	0	0	0
17.2	hormone metabolism.auxin	1 (0.36%)	0	1	0	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.36%)	0	1	0	0	0	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.36%)	0	0	0	0	0	0	0	1
17.4.2	hormone metabolism.cytokinin.signal transduction	1 (0.36%)	0	0	0	1	0	0	0	0
17.7	hormone metabolism.jasmonate	1 (0.36%)	0	0	0	0	0	1	0	0
17.7.1	hormone metabolism.jasmonate.synthesis-degradation	1 (0.36%)	0	0	0	0	0	1	0	0
17.7.1.2	hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase	1 (0.36%)	0	0	0	0	0	1	0	0
20.1	stress.biotic	1 (0.36%)	0	0	0	0	0	0	0	1
20.1.1	stress.biotic.respiratory burst	1 (0.36%)	0	0	0	0	0	0	0	1
23.1	nucleotide metabolism.synthesis	1 (0.36%)	0	0	0	1	0	0	0	0
23.1.3	nucleotide metabolism.synthesis.PRS-PP	1 (0.36%)	0	0	0	1	0	0	0	0
26.10	misc.cytochrome P450	1 (0.36%)	0	0	1	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.36%)	0	0	0	0	1	0	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.36%)	0	0	0	0	0	1	0	0
26.28	misc.GDSL-motif lipase	1 (0.36%)	0	0	1	0	0	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.36%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.36%)	0	0	0	0	0	0	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.36%)	1	0	0	0	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (0.36%)	0	0	0	1	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.36%)	0	1	0	0	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.36%)	0	0	0	0	0	1	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.36%)	0	0	0	1	0	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.36%)	0	1	0	0	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.36%)	0	0	0	0	0	0	0	1
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.36%)	0	0	0	0	0	0	0	1
27.4	RNA.RNA binding	1 (0.36%)	1	0	0	0	0	0	0	0
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	1 (0.36%)	0	0	0	0	0	0	1	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	1 (0.36%)	0	0	0	0	0	0	1	0
28.99	DNA.unspecified	1 (0.36%)	0	0	0	0	0	1	0	0
29.2.1.1.1.1.3	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3	1 (0.36%)	0	1	0	0	0	0	0	0
29.2.1.1.2.1.3	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3	1 (0.36%)	0	0	0	0	0	0	1	0
29.4.1	protein.postranslational modification.kinase	1 (0.36%)	0	0	0	0	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.36%)	0	0	0	0	0	0	0	1
29.7.4	protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase	1 (0.36%)	0	0	0	0	0	1	0	0
30.4	signalling.phosphinositides	1 (0.36%)	0	0	0	0	1	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.36%)	0	0	0	0	1	0	0	0
30.99	signalling.unspecified	1 (0.36%)	0	0	0	0	0	0	0	1
33.1	development.storage proteins	1 (0.36%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.36%)	0	0	0	0	1	0	0	0
34.11	transport.NDP-sugars at the ER	1 (0.36%)	0	0	0	1	0	0	0	0
34.14	transport.unspecified cations	1 (0.36%)	0	1	0	0	0	0	0	0
34.15	transport.potassium	1 (0.36%)	0	1	0	0	0	0	0	0
34.20	transport.porins	1 (0.36%)	0	1	0	0	0	0	0	0
34.21	transport.calcium	1 (0.36%)	0	1	0	0	0	0	0	0
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	1 (0.36%)	0	0	0	0	0	0	0	1
8.1.1	TCA / org transformation.TCA.pyruvate DH	1 (0.36%)	0	0	0	1	0	0	0	0
8.1.1.1	TCA / org transformation.TCA.pyruvate DH.E1	1 (0.36%)	0	0	0	1	0	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.36%)	0	0	0	1	0	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.36%)	0	0	0	1	0	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.36%)	0	0	0	1	0	0	0	0
20	stress	1 (0.36%)	0	0	0	0	0	0	0	1