PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_197
Name: NAP
Description: N/A

#Associated genes: 576
#Associated MapMan terms: 183

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	100 (17.36%)	5	6	13	27	17	15	8	9
27.3	RNA.regulation of transcription	93 (16.15%)	5	6	13	25	16	15	6	7
29	protein	64 (11.11%)	5	3	9	12	15	7	7	6
30	signalling	49 (8.51%)	3	4	9	10	8	6	4	5
26	misc	35 (6.08%)	1	3	5	5	15	3	1	2
29.4	protein.postranslational modification	35 (6.08%)	3	1	2	8	9	5	4	3
33	development	27 (4.69%)	2	1	1	9	10	2	0	2
34	transport	26 (4.51%)	2	3	2	6	8	2	3	0
30.2	signalling.receptor kinases	22 (3.82%)	2	2	6	2	3	2	3	2
31	cell	22 (3.82%)	2	3	4	5	5	2	1	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	21 (3.65%)	1	0	4	6	6	3	0	1
17	hormone metabolism	20 (3.47%)	2	3	1	6	4	1	2	1
33.99	development.unspecified	20 (3.47%)	2	1	1	7	5	2	0	2
17.5	hormone metabolism.ethylene	16 (2.78%)	1	2	1	6	3	1	1	1
26.10	misc.cytochrome P450	15 (2.60%)	0	1	4	2	5	1	1	1
20	stress	14 (2.43%)	0	3	1	3	2	2	2	1
29.3	protein.targeting	14 (2.43%)	0	1	4	1	4	1	1	2
31.4	cell.vesicle transport	14 (2.43%)	1	2	3	3	3	1	1	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	13 (2.26%)	1	1	0	7	2	2	0	0
29.5	protein.degradation	13 (2.26%)	2	1	3	2	2	1	2	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	12 (2.08%)	1	1	4	1	1	1	2	1
10	cell wall	11 (1.91%)	0	1	1	1	7	1	0	0
30.5	signalling.G-proteins	11 (1.91%)	0	0	2	3	3	1	1	1
17.5.2	hormone metabolism.ethylene.signal transduction	10 (1.74%)	1	1	0	3	3	1	1	0
27.3.99	RNA.regulation of transcription.unclassified	10 (1.74%)	2	2	1	1	1	1	1	1
29.4.1	protein.postranslational modification.kinase	10 (1.74%)	1	0	0	3	2	1	1	2
29.3.4	protein.targeting.secretory pathway	9 (1.56%)	0	0	2	1	3	1	1	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	9 (1.56%)	0	0	0	3	2	1	2	1
34.12	transport.metal	9 (1.56%)	1	0	1	2	3	2	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	8 (1.39%)	0	0	1	0	3	1	2	1
10.6	cell wall.degradation	7 (1.22%)	0	1	1	1	4	0	0	0
20.1	stress.biotic	7 (1.22%)	0	2	1	1	1	1	0	1
20.2	stress.abiotic	7 (1.22%)	0	1	0	2	1	1	2	0
13	amino acid metabolism	6 (1.04%)	4	0	1	0	1	0	0	0
13.1	amino acid metabolism.synthesis	6 (1.04%)	4	0	1	0	1	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	6 (1.04%)	4	0	1	0	1	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	6 (1.04%)	0	1	1	3	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	6 (1.04%)	0	0	0	2	2	1	0	1
29.5.9	protein.degradation.AAA type	6 (1.04%)	0	1	3	1	0	0	1	0
31.1	cell.organisation	6 (1.04%)	1	1	0	2	1	1	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	5 (0.87%)	0	1	1	1	2	0	0	0
13.1.6.5	amino acid metabolism.synthesis.aromatic aa.tryptophan	5 (0.87%)	4	0	0	0	1	0	0	0
13.1.6.5.1	amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase	5 (0.87%)	4	0	0	0	1	0	0	0
16	secondary metabolism	5 (0.87%)	0	0	0	2	1	0	2	0
26.3	misc.gluco-, galacto- and mannosidases	5 (0.87%)	0	1	1	1	2	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	5 (0.87%)	0	1	1	1	2	0	0	0
26.7	misc.oxidases - copper, flavone etc	5 (0.87%)	1	1	0	1	2	0	0	0
30.1	signalling.in sugar and nutrient physiology	5 (0.87%)	0	0	1	2	0	1	0	1
30.7	signalling.14-3-3 proteins	5 (0.87%)	0	1	0	2	1	1	0	0
34.3	transport.amino acids	5 (0.87%)	1	1	1	1	1	0	0	0
6	gluconeogenesis / glyoxylate cycle	4 (0.69%)	0	0	0	3	1	0	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	4 (0.69%)	0	0	0	0	4	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	4 (0.69%)	0	0	1	1	0	1	1	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	4 (0.69%)	0	1	0	2	1	0	0	0
27.4	RNA.RNA binding	4 (0.69%)	0	0	0	0	1	0	2	1
29.2.1.2.2.80	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0	4 (0.69%)	1	0	1	2	0	0	0	0
29.3.1	protein.targeting.nucleus	4 (0.69%)	0	0	2	0	1	0	0	1
29.3.4.1	protein.targeting.secretory pathway.ER	4 (0.69%)	0	0	1	1	2	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	4 (0.69%)	0	0	1	0	1	1	0	1
30.2.17	signalling.receptor kinases.DUF 26	4 (0.69%)	0	0	1	1	2	0	0	0
30.2.99	signalling.receptor kinases.misc	4 (0.69%)	1	1	1	0	0	1	0	0
6.4	gluconeogenesis / glyoxylate cycle.PEPCK	4 (0.69%)	0	0	0	3	1	0	0	0
33.1	development.storage proteins	4 (0.69%)	0	0	0	0	4	0	0	0
34.99	transport.misc	4 (0.69%)	0	0	0	1	2	0	1	0
4	glycolysis	3 (0.52%)	0	1	1	1	0	0	0	0
11	lipid metabolism	3 (0.52%)	1	0	0	2	0	0	0	0
16.1	secondary metabolism.isoprenoids	3 (0.52%)	0	0	0	0	1	0	2	0
20.2.1	stress.abiotic.heat	3 (0.52%)	0	0	0	1	0	0	2	0
20.2.4	stress.abiotic.touch/wounding	3 (0.52%)	0	1	0	1	0	1	0	0
27.1	RNA.processing	3 (0.52%)	0	0	0	2	0	0	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	3 (0.52%)	0	0	3	0	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (0.52%)	1	1	0	1	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	3 (0.52%)	0	0	1	0	0	1	1	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	3 (0.52%)	0	0	0	0	0	1	1	1
27.3.5	RNA.regulation of transcription.ARR	3 (0.52%)	0	0	0	2	0	1	0	0
28	DNA	3 (0.52%)	0	0	0	2	1	0	0	0
28.1	DNA.synthesis/chromatin structure	3 (0.52%)	0	0	0	2	1	0	0	0
33.3	development.squamosa promoter binding like (SPL)	3 (0.52%)	0	0	0	2	1	0	0	0
34.19	transport.Major Intrinsic Proteins	3 (0.52%)	0	0	0	2	0	0	1	0
34.19.3	transport.Major Intrinsic Proteins.NIP	3 (0.52%)	0	0	0	2	0	0	1	0
4.2	glycolysis.plastid branch	3 (0.52%)	0	1	1	1	0	0	0	0
1	PS	2 (0.35%)	0	0	0	0	0	1	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	2 (0.35%)	0	0	0	0	2	0	0	0
15	metal handling	2 (0.35%)	0	0	0	0	0	1	0	1
15.2	metal handling.binding, chelation and storage	2 (0.35%)	0	0	0	0	0	1	0	1
16.1.5	secondary metabolism.isoprenoids.terpenoids	2 (0.35%)	0	0	0	0	0	0	2	0
17.2	hormone metabolism.auxin	2 (0.35%)	0	1	0	0	1	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (0.35%)	0	1	0	0	1	0	0	0
18	Co-factor and vitamine metabolism	2 (0.35%)	0	0	0	1	1	0	0	0
18.7	Co-factor and vitamine metabolism.iron-sulphur clusters	2 (0.35%)	0	0	0	1	1	0	0	0
23	nucleotide metabolism	2 (0.35%)	0	1	0	1	0	0	0	0
23.2	nucleotide metabolism.degradation	2 (0.35%)	0	1	0	1	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.35%)	0	0	0	1	0	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.35%)	0	0	0	1	0	0	1	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.35%)	0	0	0	2	0	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	2 (0.35%)	0	0	0	0	0	2	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.35%)	0	1	0	0	0	1	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	2 (0.35%)	0	0	0	0	1	0	0	1
27.3.40	RNA.regulation of transcription.Aux/IAA family	2 (0.35%)	0	0	1	0	1	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	2 (0.35%)	0	0	1	0	0	0	0	1
29.2	protein.synthesis	2 (0.35%)	0	0	0	1	0	0	0	1
29.2.1.2.1.8	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8	2 (0.35%)	0	0	0	2	0	0	0	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	2 (0.35%)	0	0	0	1	0	1	0	0
29.2.1.2.2.5	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5	2 (0.35%)	1	0	0	1	0	0	0	0
29.5.5	protein.degradation.serine protease	2 (0.35%)	2	0	0	0	0	0	0	0
30.11	signalling.light	2 (0.35%)	0	0	0	1	0	0	0	1
30.3	signalling.calcium	2 (0.35%)	0	1	0	0	1	0	0	0
30.4	signalling.phosphinositides	2 (0.35%)	1	0	0	0	0	1	0	0
31.3	cell.cycle	2 (0.35%)	0	0	1	0	1	0	0	0
34.7	transport.phosphate	2 (0.35%)	0	2	0	0	0	0	0	0
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	2 (0.35%)	0	0	1	1	0	0	0	0
1.1	PS.lightreaction	1 (0.17%)	0	0	0	0	0	1	0	0
1.1.4	PS.lightreaction.ATP synthase	1 (0.17%)	0	0	0	0	0	1	0	0
1.1.4.4	PS.lightreaction.ATP synthase.gamma chain	1 (0.17%)	0	0	0	0	0	1	0	0
1.3	PS.calvin cycle	1 (0.17%)	0	0	0	0	0	0	0	1
1.3.8	PS.calvin cycle.transketolase	1 (0.17%)	0	0	0	0	0	0	0	1
9	mitochondrial electron transport / ATP synthesis	1 (0.17%)	0	0	0	0	0	0	1	0
10.2	cell wall.cellulose synthesis	1 (0.17%)	0	0	0	0	1	0	0	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.17%)	0	0	0	0	1	0	0	0
10.3	cell wall.hemicellulose synthesis	1 (0.17%)	0	0	0	0	1	0	0	0
10.7	cell wall.modification	1 (0.17%)	0	0	0	0	1	0	0	0
10.8	cell wall.pectin*esterases	1 (0.17%)	0	0	0	0	0	1	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.17%)	0	0	0	0	0	1	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	1 (0.17%)	0	0	0	1	0	0	0	0
11.1.8	lipid metabolism.FA synthesis and FA elongation.acyl coa ligase	1 (0.17%)	0	0	0	1	0	0	0	0
11.10	lipid metabolism.glycolipid synthesis	1 (0.17%)	0	0	0	1	0	0	0	0
11.10.1	lipid metabolism.glycolipid synthesis.MGDG synthase	1 (0.17%)	0	0	0	1	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.17%)	1	0	0	0	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.17%)	1	0	0	0	0	0	0	0
12	N-metabolism	1 (0.17%)	0	0	0	0	0	0	0	1
12.3	N-metabolism.N-degradation	1 (0.17%)	0	0	0	0	0	0	0	1
12.3.1	N-metabolism.N-degradation.glutamate dehydrogenase	1 (0.17%)	0	0	0	0	0	0	0	1
13.1.3.6.1.1	amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase	1 (0.17%)	0	1	0	0	0	0	0	0
13.1.6.3	amino acid metabolism.synthesis.aromatic aa.phenylalanine	1 (0.17%)	0	0	1	0	0	0	0	0
13.1.6.3.1	amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase	1 (0.17%)	0	0	1	0	0	0	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	1 (0.17%)	0	0	0	0	1	0	0	0
16.1.4.21	secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase	1 (0.17%)	0	0	0	0	1	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.17%)	0	0	0	1	0	0	0	0
16.8	secondary metabolism.flavonoids	1 (0.17%)	0	0	0	1	0	0	0	0
16.8.1	secondary metabolism.flavonoids.anthocyanins	1 (0.17%)	0	0	0	1	0	0	0	0
16.8.1.21	secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase	1 (0.17%)	0	0	0	1	0	0	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.17%)	1	0	0	0	0	0	0	0
17.3.1	hormone metabolism.brassinosteroid.synthesis-degradation	1 (0.17%)	1	0	0	0	0	0	0	0
17.3.1.1	hormone metabolism.brassinosteroid.synthesis-degradation.BRs	1 (0.17%)	1	0	0	0	0	0	0	0
17.3.1.1.5	hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation	1 (0.17%)	1	0	0	0	0	0	0	0
17.5.1.1	hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase	1 (0.17%)	0	0	0	1	0	0	0	0
17.6	hormone metabolism.gibberelin	1 (0.17%)	0	0	0	0	0	0	1	0
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.17%)	0	0	0	0	0	0	1	0
20.2.3	stress.abiotic.drought/salt	1 (0.17%)	0	0	0	0	1	0	0	0
21	redox	1 (0.17%)	0	0	1	0	0	0	0	0
21.4	redox.glutaredoxins	1 (0.17%)	0	0	1	0	0	0	0	0
24	Biodegradation of Xenobiotics	1 (0.17%)	0	0	0	0	0	0	1	0
26.1	misc.misc2	1 (0.17%)	0	0	0	0	0	0	0	1
26.18	misc.invertase/pectin methylesterase inhibitor family protein	1 (0.17%)	0	0	0	0	1	0	0	0
26.31	misc.zinc finger	1 (0.17%)	0	0	0	0	1	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.17%)	0	0	0	0	0	1	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	1 (0.17%)	0	0	0	0	0	1	0	0
27.1.1	RNA.processing.splicing	1 (0.17%)	0	0	0	1	0	0	0	0
27.1.2	RNA.processing.RNA helicase	1 (0.17%)	0	0	0	1	0	0	0	0
27.1.20	RNA.processing.degradation dicer	1 (0.17%)	0	0	0	0	0	0	0	1
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	1 (0.17%)	0	0	0	0	0	0	0	1
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.17%)	0	0	0	1	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.17%)	0	0	0	1	0	0	0	0
27.3.48	RNA.regulation of transcription.FHA transcription factor	1 (0.17%)	0	0	0	0	0	1	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.17%)	0	0	0	0	1	0	0	0
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	1 (0.17%)	0	0	0	0	1	0	0	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	1 (0.17%)	0	0	0	0	1	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.17%)	0	0	0	1	0	0	0	0
29.2.4	protein.synthesis.elongation	1 (0.17%)	0	0	0	0	0	0	0	1
29.3.2	protein.targeting.mitochondria	1 (0.17%)	0	1	0	0	0	0	0	0
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.17%)	0	0	0	0	0	0	1	0
29.4.1.59	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX	1 (0.17%)	0	0	0	0	0	0	1	0
29.5.4	protein.degradation.aspartate protease	1 (0.17%)	0	0	0	1	0	0	0	0
30.2.24	signalling.receptor kinases.S-locus glycoprotein like	1 (0.17%)	0	0	0	0	0	0	0	1
30.2.3	signalling.receptor kinases.leucine rich repeat III	1 (0.17%)	0	0	0	0	0	0	1	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.17%)	0	0	0	0	0	1	0	0
30.4.4	signalling.phosphinositides.phosphoinositide phospholipase C	1 (0.17%)	1	0	0	0	0	0	0	0
4.2.4	glycolysis.plastid branch.phosphofructokinase (PFK)	1 (0.17%)	0	1	0	0	0	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.17%)	0	0	0	0	0	0	1	0
34.2	transport.sugars	1 (0.17%)	0	0	0	0	0	0	1	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.17%)	0	0	0	0	1	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.17%)	0	0	0	0	1	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.17%)	0	0	0	0	0	0	1	0