MapMan terms associated with a binding site

Binding site
Matrix_191
Name
PIF5
Description
Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling
#Associated genes
928
#Associated MapMan terms
215

Click table-header(s) to enable sorting
MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA157 (16.92%)8150651301915013
27.3RNA.regulation of transcription145 (15.63%)8150546271814012
29protein76 (8.19%)5603241811405
30signalling59 (6.36%)66032093804
29.4protein.postranslational modification44 (4.74%)140214106403
26misc35 (3.77%)3303748403
34transport34 (3.66%)12011073604
30.2signalling.receptor kinases33 (3.56%)5502573501
31cell26 (2.80%)2300970401
17hormone metabolism23 (2.48%)2002853201
33development22 (2.37%)1206621301
33.99development.unspecified22 (2.37%)1206621301
10cell wall21 (2.26%)0000364305
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family20 (2.16%)1401612302
29.5protein.degradation20 (2.16%)4201543001
27.3.99RNA.regulation of transcription.unclassified19 (2.05%)2102621401
31.1cell.organisation19 (2.05%)1200560401
20stress18 (1.94%)2003522004
29.4.1protein.postranslational modification.kinase17 (1.83%)1201443002
29.5.11.4.2protein.degradation.ubiquitin.E3.RING17 (1.83%)0200551301
30.2.3signalling.receptor kinases.leucine rich repeat III17 (1.83%)3302422100
28DNA16 (1.72%)1201423102
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII16 (1.72%)0201443002
20.1stress.biotic14 (1.51%)2003312003
16secondary metabolism13 (1.40%)2102231002
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family13 (1.40%)0000922000
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family13 (1.40%)1100621101
34.16transport.ABC transporters and multidrug resistance systems13 (1.40%)0001540102
10.6cell wall.degradation12 (1.29%)0000132204
27.3.11RNA.regulation of transcription.C2H2 zinc finger family12 (1.29%)0200440002
29.5.11protein.degradation.ubiquitin12 (1.29%)0201432000
28.1DNA.synthesis/chromatin structure11 (1.19%)0101312102
30.3signalling.calcium11 (1.19%)1100510102
29.5.11.3protein.degradation.ubiquitin.E210 (1.08%)0201322000
30.2.11signalling.receptor kinases.leucine rich repeat XI10 (1.08%)0000141301
10.6.3cell wall.degradation.pectate lyases and polygalacturonases9 (0.97%)0000122202
27.3.29RNA.regulation of transcription.TCP transcription factor family9 (0.97%)1300201101
2major CHO metabolism8 (0.86%)1002310100
2.2major CHO metabolism.degradation8 (0.86%)1002310100
17.2hormone metabolism.auxin8 (0.86%)2001220100
27.1RNA.processing8 (0.86%)0001221101
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family8 (0.86%)0000231200
30.11signalling.light8 (0.86%)0000610100
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated7 (0.75%)2001210100
17.4hormone metabolism.cytokinin7 (0.75%)0000421000
17.4.1hormone metabolism.cytokinin.synthesis-degradation7 (0.75%)0000421000
27.1.1RNA.processing.splicing7 (0.75%)0001211101
2.2.2major CHO metabolism.degradation.starch6 (0.65%)1001210100
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage6 (0.65%)1001210100
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase6 (0.65%)1001210100
9mitochondrial electron transport / ATP synthesis6 (0.65%)0001211100
16.2secondary metabolism.phenylpropanoids6 (0.65%)1002120000
26.16misc.myrosinases-lectin-jacalin6 (0.65%)1000102200
26.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein6 (0.65%)1100121000
26.7misc.oxidases - copper, flavone etc6 (0.65%)0001211100
27.3.35RNA.regulation of transcription.bZIP transcription factor family6 (0.65%)0100041000
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family6 (0.65%)0000202101
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis5 (0.54%)1002110000
16.2.1.10secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD5 (0.54%)1002110000
16.8secondary metabolism.flavonoids5 (0.54%)0100111001
27.3.24RNA.regulation of transcription.MADS box transcription factor family5 (0.54%)0001121000
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family5 (0.54%)0000221000
29.3protein.targeting5 (0.54%)0000311000
30.5signalling.G-proteins5 (0.54%)0000400100
31.3cell.cycle5 (0.54%)0000410000
3minor CHO metabolism4 (0.43%)0001020100
11lipid metabolism4 (0.43%)0200010001
15metal handling4 (0.43%)1000300000
15.2metal handling.binding, chelation and storage4 (0.43%)1000300000
17.7hormone metabolism.jasmonate4 (0.43%)0000101101
17.7.3hormone metabolism.jasmonate.induced-regulated-responsive-activated4 (0.43%)0000101101
20.2stress.abiotic4 (0.43%)0000210001
26.10misc.cytochrome P4504 (0.43%)1000200001
27.3.67RNA.regulation of transcription.putative transcription regulator4 (0.43%)0000210001
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family4 (0.43%)1001010100
27.4RNA.RNA binding4 (0.43%)0000310000
29.3.4protein.targeting.secretory pathway4 (0.43%)0000211000
29.3.4.99protein.targeting.secretory pathway.unspecified4 (0.43%)0000211000
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX4 (0.43%)1000110001
29.5.5protein.degradation.serine protease4 (0.43%)2000100001
9.2mitochondrial electron transport / ATP synthesis.NADH-DH4 (0.43%)0001110100
34.12transport.metal4 (0.43%)0100100101
34.99transport.misc4 (0.43%)0000210100
10.5cell wall.cell wall proteins3 (0.32%)0000021000
10.7cell wall.modification3 (0.32%)0000101100
10.8cell wall.pectin*esterases3 (0.32%)0000110001
10.8.1cell wall.pectin*esterases.PME3 (0.32%)0000110001
16.8.3secondary metabolism.flavonoids.dihydroflavonols3 (0.32%)0000011001
16.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase3 (0.32%)0000011001
20.1.7stress.biotic.PR-proteins3 (0.32%)2000010000
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family3 (0.32%)1200000000
27.3.14RNA.regulation of transcription.CCAAT box binding factor family, HAP23 (0.32%)0000200001
27.3.21RNA.regulation of transcription.GRAS transcription factor family3 (0.32%)0000101100
3.4minor CHO metabolism.myo-inositol3 (0.32%)0001010100
21redox3 (0.32%)0001100100
23nucleotide metabolism3 (0.32%)1000010001
26.12misc.peroxidases3 (0.32%)0002001000
26.28misc.GDSL-motif lipase3 (0.32%)0100010100
28.99DNA.unspecified3 (0.32%)1100100000
29.7protein.glycosylation3 (0.32%)0000120000
3.4.4minor CHO metabolism.myo-inositol.myo inositol oxygenases3 (0.32%)0001010100
34.19transport.Major Intrinsic Proteins3 (0.32%)0000111000
34.9transport.metabolite transporters at the mitochondrial membrane3 (0.32%)0000010101
9.2.1mitochondrial electron transport / ATP synthesis.NADH-DH.type II3 (0.32%)0001110000
9.2.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external3 (0.32%)0001110000
1PS2 (0.22%)0000011000
10.5.2cell wall.cell wall proteins.proline rich proteins2 (0.22%)0000020000
10.6.2cell wall.degradation.mannan-xylose-arabinose-fucose2 (0.22%)0000010001
11.1lipid metabolism.FA synthesis and FA elongation2 (0.22%)0100010000
16.8.1secondary metabolism.flavonoids.anthocyanins2 (0.22%)0100100000
16.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase2 (0.22%)0100100000
17.3hormone metabolism.brassinosteroid2 (0.22%)0001001000
17.3.2hormone metabolism.brassinosteroid.signal transduction2 (0.22%)0001001000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR2 (0.22%)0001001000
2.2.1major CHO metabolism.degradation.sucrose2 (0.22%)0001100000
2.2.1.3major CHO metabolism.degradation.sucrose.invertases2 (0.22%)0001100000
2.2.1.3.2major CHO metabolism.degradation.sucrose.invertases.cell wall2 (0.22%)0001100000
8TCA / org transformation2 (0.22%)0001100000
20.2.1stress.abiotic.heat2 (0.22%)0000100001
20.2.3stress.abiotic.drought/salt2 (0.22%)0000110000
21.6redox.dismutases and catalases2 (0.22%)0001100000
23.2nucleotide metabolism.degradation2 (0.22%)1000010000
23.2.1nucleotide metabolism.degradation.pyrimidine2 (0.22%)1000010000
23.2.1.2nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase2 (0.22%)1000010000
26.18misc.invertase/pectin methylesterase inhibitor family protein2 (0.22%)0100100000
26.4misc.beta 1,3 glucan hydrolases2 (0.22%)0000001001
26.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase2 (0.22%)0000001001
27.3.25RNA.regulation of transcription.MYB domain transcription factor family2 (0.22%)1000000001
27.3.26RNA.regulation of transcription.MYB-related transcription factor family2 (0.22%)0000011000
27.3.40RNA.regulation of transcription.Aux/IAA family2 (0.22%)0000001001
28.1.3DNA.synthesis/chromatin structure.histone2 (0.22%)0000100001
28.2DNA.repair2 (0.22%)0000011000
29.2protein.synthesis2 (0.22%)0000110000
29.5.11.20protein.degradation.ubiquitin.proteasom2 (0.22%)0000110000
30.2.20signalling.receptor kinases.wheat LRK10 like2 (0.22%)1000000100
30.2.99signalling.receptor kinases.misc2 (0.22%)0100010000
8.1TCA / org transformation.TCA2 (0.22%)0001100000
9.1mitochondrial electron transport / ATP synthesis.NADH-DH2 (0.22%)0000101000
30.99signalling.unspecified2 (0.22%)0001000001
31.2cell.division2 (0.22%)1100000000
34.19.2transport.Major Intrinsic Proteins.TIP2 (0.22%)0000110000
34.20transport.porins2 (0.22%)0100000100
34.3transport.amino acids2 (0.22%)1000100000
8.1.1TCA / org transformation.TCA.pyruvate DH2 (0.22%)0001100000
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear2 (0.22%)0000101000
1.1PS.lightreaction1 (0.11%)0000010000
1.1.1PS.lightreaction.photosystem II1 (0.11%)0000010000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits1 (0.11%)0000010000
1.3PS.calvin cycle1 (0.11%)0000001000
1.3.2PS.calvin cycle.rubisco small subunit1 (0.11%)0000001000
4glycolysis1 (0.11%)0000010000
5fermentation1 (0.11%)0000010000
10.5.5cell wall.cell wall proteins.RGP1 (0.11%)0000001000
10.6.1cell wall.degradation.cellulases and beta -1,4-glucanases1 (0.11%)0000000001
11.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase1 (0.11%)0100000000
11.1.3lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase1 (0.11%)0000010000
11.8lipid metabolism.exotics(steroids, squalene etc)1 (0.11%)0100000000
11.9lipid metabolism.lipid degradation1 (0.11%)0000000001
11.9.3lipid metabolism.lipid degradation.lysophospholipases1 (0.11%)0000000001
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase1 (0.11%)0000000001
13amino acid metabolism1 (0.11%)0000010000
13.1amino acid metabolism.synthesis1 (0.11%)0000010000
13.1.6amino acid metabolism.synthesis.aromatic aa1 (0.11%)0000010000
13.1.6.5amino acid metabolism.synthesis.aromatic aa.tryptophan1 (0.11%)0000010000
14S-assimilation1 (0.11%)0000000001
14.1S-assimilation.ATPS1 (0.11%)0000000001
16.1secondary metabolism.isoprenoids1 (0.11%)0000000001
16.1.5secondary metabolism.isoprenoids.terpenoids1 (0.11%)0000000001
16.7secondary metabolism.wax1 (0.11%)1000000000
17.1hormone metabolism.abscisic acid1 (0.11%)0000100000
17.1.2hormone metabolism.abscisic acid.signal transduction1 (0.11%)0000100000
17.2.2hormone metabolism.auxin.signal transduction1 (0.11%)0000010000
3.2minor CHO metabolism.trehalose1 (0.11%)0000010000
4.1glycolysis.cytosolic branch1 (0.11%)0000010000
5.10fermentation.aldehyde dehydrogenase1 (0.11%)0000010000
17.6hormone metabolism.gibberelin1 (0.11%)0000010000
17.6.2hormone metabolism.gibberelin.signal transduction1 (0.11%)0000010000
3.2.3minor CHO metabolism.trehalose.potential TPS/TPP1 (0.11%)0000010000
4.1.8glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)1 (0.11%)0000010000
8.1.1.1TCA / org transformation.TCA.pyruvate DH.E11 (0.11%)0001000000
8.1.1.3TCA / org transformation.TCA.pyruvate DH.E31 (0.11%)0000100000
9.2.2mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external1 (0.11%)0000000100
18Co-factor and vitamine metabolism1 (0.11%)1000000000
18.7Co-factor and vitamine metabolism.iron-sulphur clusters1 (0.11%)1000000000
21.1redox.thioredoxin1 (0.11%)0000000100
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.11%)0000000001
23.4.1nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase1 (0.11%)0000000001
24Biodegradation of Xenobiotics1 (0.11%)0000000001
26.13misc.acid and other phosphatases1 (0.11%)0000001000
26.23misc.rhodanese1 (0.11%)0000001000
26.3misc.gluco-, galacto- and mannosidases1 (0.11%)0000000001
26.3.4misc.gluco-, galacto- and mannosidases.endoglucanase1 (0.11%)0000000001
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP1 (0.11%)0000010000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family1 (0.11%)0000010000
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family1 (0.11%)0100000000
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors1 (0.11%)0000100000
27.3.52RNA.regulation of transcription.Global transcription factor group1 (0.11%)0000001000
27.3.68RNA.regulation of transcription.PWWP domain protein1 (0.11%)0000001000
29.2.1.2.2.30protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L301 (0.11%)0000000001
29.2.1.2.2.80protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P01 (0.11%)0000100000
29.2.3protein.synthesis.initiation1 (0.11%)0000010000
29.2.4protein.synthesis.elongation1 (0.11%)0000100000
29.3.1protein.targeting.nucleus1 (0.11%)0000100000
29.5.1protein.degradation.subtilases1 (0.11%)1000000000
29.5.3protein.degradation.cysteine protease1 (0.11%)0000001000
29.5.4protein.degradation.aspartate protease1 (0.11%)1000000000
29.6protein.folding1 (0.11%)0000000001
29.8protein.assembly and cofactor ligation1 (0.11%)0000001000
30.2.1signalling.receptor kinases.leucine rich repeat I1 (0.11%)0100000000
30.2.7signalling.receptor kinases.leucine rich repeat VII1 (0.11%)1000000000
31.3.1cell.cycle.peptidylprolyl isomerase1 (0.11%)0000010000
34.10transport.nucleotides1 (0.11%)0000000100
34.15transport.potassium1 (0.11%)0000001000
34.19.1transport.Major Intrinsic Proteins.PIP1 (0.11%)0000001000
34.22transport.cyclic nucleotide or calcium regulated channels1 (0.11%)0000001000