PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_160
Name: RVE1
Description: N/A

#Associated genes: 337
#Associated MapMan terms: 146

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	58 (17.21%)	5	3	9	18	9	7	4	3
27.3	RNA.regulation of transcription	43 (12.76%)	4	2	8	12	7	6	2	2
29	protein	20 (5.93%)	1	1	3	5	8	0	2	0
20	stress	18 (5.34%)	1	2	6	3	2	1	2	1
20.2	stress.abiotic	16 (4.75%)	1	1	5	3	2	1	2	1
31	cell	13 (3.86%)	2	1	0	2	3	1	1	3
20.2.1	stress.abiotic.heat	12 (3.56%)	0	0	5	2	2	1	1	1
33	development	12 (3.56%)	2	1	1	3	4	1	0	0
26	misc	11 (3.26%)	1	3	0	2	2	1	1	1
28	DNA	11 (3.26%)	0	2	2	2	2	2	1	0
30	signalling	11 (3.26%)	0	1	3	4	0	1	1	1
33.99	development.unspecified	11 (3.26%)	2	1	1	2	4	1	0	0
27.4	RNA.RNA binding	10 (2.97%)	1	0	1	3	2	1	1	1
31.1	cell.organisation	9 (2.67%)	1	1	0	1	1	1	1	3
18	Co-factor and vitamine metabolism	8 (2.37%)	0	3	2	0	2	0	1	0
18.2	Co-factor and vitamine metabolism.thiamine	8 (2.37%)	0	3	2	0	2	0	1	0
21	redox	8 (2.37%)	0	0	1	3	3	0	0	1
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	8 (2.37%)	0	0	2	3	1	1	1	0
29.5	protein.degradation	7 (2.08%)	0	1	1	2	3	0	0	0
11	lipid metabolism	6 (1.78%)	1	2	2	0	1	0	0	0
21.1	redox.thioredoxin	6 (1.78%)	0	0	0	3	3	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	6 (1.78%)	0	0	1	2	2	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	6 (1.78%)	0	0	2	2	0	1	1	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	6 (1.78%)	1	0	1	3	0	0	0	1
1	PS	5 (1.48%)	0	1	1	0	0	1	2	0
3	minor CHO metabolism	5 (1.48%)	0	1	1	2	0	0	0	1
4	glycolysis	5 (1.48%)	1	1	2	0	0	0	0	1
13	amino acid metabolism	5 (1.48%)	0	0	1	2	0	0	1	1
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	5 (1.48%)	1	0	1	1	0	0	1	1
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	5 (1.48%)	0	0	1	1	1	2	0	0
4.2	glycolysis.plastid branch	5 (1.48%)	1	1	2	0	0	0	0	1
29.2	protein.synthesis	5 (1.48%)	0	0	2	0	3	0	0	0
29.4	protein.postranslational modification	5 (1.48%)	1	0	0	2	1	0	1	0
30.2	signalling.receptor kinases	5 (1.48%)	0	0	1	2	0	0	1	1
4.2.2	glycolysis.plastid branch.phosphoglucomutase (PGM)	5 (1.48%)	1	1	2	0	0	0	0	1
34	transport	5 (1.48%)	0	0	1	1	2	0	0	1
1.1	PS.lightreaction	4 (1.19%)	0	1	0	0	0	1	2	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (1.19%)	0	0	1	2	0	1	0	0
3.6	minor CHO metabolism.callose	4 (1.19%)	0	1	0	2	0	0	0	1
16	secondary metabolism	4 (1.19%)	0	1	1	0	1	1	0	0
27.2	RNA.transcription	4 (1.19%)	0	1	0	2	0	0	1	0
28.2	DNA.repair	4 (1.19%)	0	0	2	0	1	0	1	0
28.99	DNA.unspecified	4 (1.19%)	0	0	0	2	1	1	0	0
13.1	amino acid metabolism.synthesis	3 (0.89%)	0	0	1	1	0	0	1	0
13.1.1	amino acid metabolism.synthesis.central amino acid metabolism	3 (0.89%)	0	0	1	1	0	0	1	0
13.1.1.1	amino acid metabolism.synthesis.central amino acid metabolism.GABA	3 (0.89%)	0	0	1	1	0	0	1	0
13.1.1.1.1	amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase	3 (0.89%)	0	0	1	1	0	0	1	0
16.1	secondary metabolism.isoprenoids	3 (0.89%)	0	0	1	0	1	1	0	0
16.1.3	secondary metabolism.isoprenoids.tocopherol biosynthesis	3 (0.89%)	0	0	1	0	1	1	0	0
16.1.3.2	secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase	3 (0.89%)	0	0	1	0	1	1	0	0
20.2.3	stress.abiotic.drought/salt	3 (0.89%)	1	1	0	0	0	0	1	0
26.10	misc.cytochrome P450	3 (0.89%)	0	1	0	0	0	1	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	3 (0.89%)	0	0	1	1	1	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	3 (0.89%)	0	0	1	0	1	1	0	0
28.1	DNA.synthesis/chromatin structure	3 (0.89%)	0	2	0	0	0	1	0	0
29.2.2	protein.synthesis.ribosome biogenesis	3 (0.89%)	0	0	1	0	2	0	0	0
29.2.2.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications	3 (0.89%)	0	0	1	0	2	0	0	0
29.2.2.3.1	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs	3 (0.89%)	0	0	1	0	2	0	0	0
29.4.1	protein.postranslational modification.kinase	3 (0.89%)	0	0	0	1	1	0	1	0
29.5.3	protein.degradation.cysteine protease	3 (0.89%)	0	1	1	1	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	3 (0.89%)	0	0	1	1	0	0	1	0
30.3	signalling.calcium	3 (0.89%)	0	0	1	2	0	0	0	0
1.1.1	PS.lightreaction.photosystem II	2 (0.59%)	0	1	0	0	0	0	1	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	2 (0.59%)	0	1	0	0	0	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.59%)	0	0	0	0	0	1	1	0
11.1	lipid metabolism.FA synthesis and FA elongation	2 (0.59%)	1	0	0	0	1	0	0	0
13.2	amino acid metabolism.degradation	2 (0.59%)	0	0	0	1	0	0	0	1
13.2.5	amino acid metabolism.degradation.serine-glycine-cysteine group	2 (0.59%)	0	0	0	1	0	0	0	1
13.2.5.2	amino acid metabolism.degradation.serine-glycine-cysteine group.glycine	2 (0.59%)	0	0	0	1	0	0	0	1
17	hormone metabolism	2 (0.59%)	0	0	1	0	0	1	0	0
20.1	stress.biotic	2 (0.59%)	0	1	1	0	0	0	0	0
23	nucleotide metabolism	2 (0.59%)	1	0	0	0	0	0	1	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	2 (0.59%)	1	0	0	0	0	0	1	0
23.5.4	nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase	2 (0.59%)	1	0	0	0	0	0	1	0
26.7	misc.oxidases - copper, flavone etc	2 (0.59%)	0	0	0	1	0	0	1	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (0.59%)	0	1	0	0	1	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	2 (0.59%)	1	0	0	1	0	0	0	0
29.2.3	protein.synthesis.initiation	2 (0.59%)	0	0	1	0	1	0	0	0
29.3	protein.targeting	2 (0.59%)	0	0	0	1	1	0	0	0
29.3.4	protein.targeting.secretory pathway	2 (0.59%)	0	0	0	1	1	0	0	0
29.5.5	protein.degradation.serine protease	2 (0.59%)	0	0	0	0	2	0	0	0
30.11	signalling.light	2 (0.59%)	0	0	1	0	0	1	0	0
30.2.99	signalling.receptor kinases.misc	2 (0.59%)	0	0	0	1	0	0	0	1
31.2	cell.division	2 (0.59%)	0	0	0	1	1	0	0	0
34.99	transport.misc	2 (0.59%)	0	0	0	0	2	0	0	0
1.3	PS.calvin cycle	1 (0.30%)	0	0	1	0	0	0	0	0
3.5	minor CHO metabolism.others	1 (0.30%)	0	0	1	0	0	0	0	0
10	cell wall	1 (0.30%)	1	0	0	0	0	0	0	0
10.6	cell wall.degradation	1 (0.30%)	1	0	0	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.30%)	1	0	0	0	0	0	0	0
11.1.15	lipid metabolism.FA synthesis and FA elongation.ACP desaturase	1 (0.30%)	1	0	0	0	0	0	0	0
11.1.8	lipid metabolism.FA synthesis and FA elongation.acyl coa ligase	1 (0.30%)	0	0	0	0	1	0	0	0
11.2	lipid metabolism.FA desaturation	1 (0.30%)	0	1	0	0	0	0	0	0
11.2.1	lipid metabolism.FA desaturation.desaturase	1 (0.30%)	0	1	0	0	0	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	1 (0.30%)	0	1	0	0	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.30%)	0	0	1	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.30%)	0	0	1	0	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.30%)	0	0	1	0	0	0	0	0
11.9.3.2	lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase	1 (0.30%)	0	0	1	0	0	0	0	0
15	metal handling	1 (0.30%)	0	0	1	0	0	0	0	0
15.2	metal handling.binding, chelation and storage	1 (0.30%)	0	0	1	0	0	0	0	0
16.8	secondary metabolism.flavonoids	1 (0.30%)	0	1	0	0	0	0	0	0
16.8.3	secondary metabolism.flavonoids.dihydroflavonols	1 (0.30%)	0	1	0	0	0	0	0	0
16.8.3.1	secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase	1 (0.30%)	0	1	0	0	0	0	0	0
17.1	hormone metabolism.abscisic acid	1 (0.30%)	0	0	0	0	0	1	0	0
17.1.2	hormone metabolism.abscisic acid.signal transduction	1 (0.30%)	0	0	0	0	0	1	0	0
17.5	hormone metabolism.ethylene	1 (0.30%)	0	0	1	0	0	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.30%)	0	0	1	0	0	0	0	0
19	tetrapyrrole synthesis	1 (0.30%)	0	0	0	0	0	0	1	0
19.99	tetrapyrrole synthesis.unspecified	1 (0.30%)	0	0	0	0	0	0	1	0
20.2.4	stress.abiotic.touch/wounding	1 (0.30%)	0	0	0	1	0	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.30%)	0	0	1	0	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.30%)	0	0	1	0	0	0	0	0
21.4	redox.glutaredoxins	1 (0.30%)	0	0	0	0	0	0	0	1
26.11	misc.alcohol dehydrogenases	1 (0.30%)	0	1	0	0	0	0	0	0
26.11.1	misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase	1 (0.30%)	0	1	0	0	0	0	0	0
26.13	misc.acid and other phosphatases	1 (0.30%)	0	0	0	0	1	0	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.30%)	0	1	0	0	0	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.30%)	0	0	0	0	1	0	0	0
26.23	misc.rhodanese	1 (0.30%)	0	0	0	1	0	0	0	0
26.6	misc.O-methyl transferases	1 (0.30%)	1	0	0	0	0	0	0	0
27.1	RNA.processing	1 (0.30%)	0	0	0	1	0	0	0	0
27.1.1	RNA.processing.splicing	1 (0.30%)	0	0	0	1	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.30%)	0	0	0	0	0	0	0	1
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.30%)	0	1	0	0	0	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.30%)	0	0	0	1	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.30%)	1	0	0	0	0	0	0	0
27.3.75	RNA.regulation of transcription.GRP	1 (0.30%)	1	0	0	0	0	0	0	0
29.1	protein.aa activation	1 (0.30%)	0	0	0	0	0	0	1	0
29.1.3	protein.aa activation.threonine-tRNA ligase	1 (0.30%)	0	0	0	0	0	0	1	0
29.2.1.2.1.23	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S23	1 (0.30%)	0	1	0	0	0	0	0	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.30%)	0	0	0	0	0	0	1	0
29.3.4.2	protein.targeting.secretory pathway.golgi	1 (0.30%)	0	0	0	1	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.30%)	0	0	0	0	1	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.30%)	0	0	0	1	0	0	0	0
29.5.9	protein.degradation.AAA type	1 (0.30%)	0	0	0	0	1	0	0	0
30.4	signalling.phosphinositides	1 (0.30%)	0	1	0	0	0	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.30%)	0	1	0	0	0	0	0	0
31.3	cell.cycle	1 (0.30%)	0	0	0	0	1	0	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.30%)	0	0	0	0	1	0	0	0
31.4	cell.vesicle transport	1 (0.30%)	1	0	0	0	0	0	0	0
33.30	development.multitarget	1 (0.30%)	0	0	0	1	0	0	0	0
33.30.1	development.multitarget.target of rapamycin	1 (0.30%)	0	0	0	1	0	0	0	0
34.15	transport.potassium	1 (0.30%)	0	0	0	1	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.30%)	0	0	0	0	0	0	0	1
34.3	transport.amino acids	1 (0.30%)	0	0	1	0	0	0	0	0