Motif_612 | RBCSBOX2PS | rbcS box II; 5' upstream region (-151) of pea rbcS gene; Binding with trans factor GT-1; one of GT-1 boxes; GT-1 may act as a molecular switch modulated by calcium-dependent phosphorylation and dephosphorylation in response to light signals | | 93.33% |
Motif_126 | 5256BOXLELAT5256 | 52/56 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)52 and LAT56 promoters; Encompassing PB core motif (TGTGGTT), and is closely related to the box II sequence motif in the pea rbcS-3A gene promoter; Involved in modulating the activity of the LAT gene promoters in pollen; Dispensable for the developmental regulation of the LAT52 gene in pollen; 52/56 box may be a target for the binding of a member of the GT-1 transcription factor family | | 73.33% |
Motif_175 | BOX2PVCHS15 | Box 2 of bean (P.v.) chs15 promoter; SBF-1 binding site | | 66.67% |
Motif_247 | BOX3PVCHS15 | Box 3 of bean chs15 promoter; SBF-1 binding site | | 66.67% |
Motif_78 | SITE3SORPS1 | Site 3 of spinach (S.o.) rps1 promoter; S1F binding site | | 60.00% |
Motif_304 | SRENTTTO1 | Stress responsive element (SRE) in tobacco retrotransposon Tto1; A 13 bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1; Involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors; Contains a conserved motif, Box L | | 60.00% |
Motif_491 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 60.00% |
Motif_90 | GT1MOTIFPSRBCS | GT-1 motif; Consensus sequence of rbcS BOX II, III, II', III'; GT-1 box; 5' upstream region (-151) of pea (P.s.) rbcS gene; binding with trans factor GT-1; See GT1CORE | | 56.67% |
Motif_494 | TOPOISOM | Topoisomerase cleavage site consensus sequence; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR) | | 54.56% |
Motif_178 | MRNA3ENDTAH3 | Cis element in 3' end region of wheat histone H3 mRNA; 3' end formation; Also found in histone genes of other plants, yeast | | 53.33% |
Motif_378 | WRKY6 | Targets of AtWRKY6 regulation during plant senescence and pathogen defense | | 53.33% |
Motif_442 | GT2OSPHYA | GT-2 (a rice nuclear protein) binding site in a rice phyA promoter; phyA gene are transcriptionaly repressed in response to light; One of GT elements;The HMG-1/Y protein PF1 stimulates binding of the GT-2 to PHYA gene promoter | | 53.33% |
Motif_489 | SORLREP3AT | one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and also all SORLIPs;Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 53.33% |
Motif_601 | D3GMAUX28 | D3; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -750 and -760; A/T-rich sequence | | 53.33% |
Motif_224 | CGTGTSPHZMC1 | Sequence found in the maize C1 gene promoter; Located between -147 to -132; Containing Sph element; Required for ABA responsiveness | | 53.33% |
Motif_135 | WRKY11 | Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function | | 53.33% |
Motif_417 | SITE1SORPS1 | Site 1 in the spinach rps1 promoter; S1F binding site; Nuclear genes encoding plastid ribosomal proteins are more highly expressed in leaves than in root; Involved in leaf-specific induction; Seems to be light-independent; Involved in negative regulation; Related to the light-responsive Box II of the pea rbcs-3A promoter; Related to GT elements; S1 box=ATGGTA | | 53.33% |
Matrix_205 | AGL15 | Not Available | | 52.16% |
Matrix_523 | FUSCA3 | Not Available | | 52.01% |
Motif_615 | MARTBOX | T-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR) | | 51.79% |
Matrix_51 | LFY | Not Available | | 51.38% |
Matrix_140 | ATHB5 | DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 50.94% |
Motif_207 | MAMMALENHAN | Core sequence in enhancers from polyoma virus and from the IgM heavy chain gene | | 50.00% |