Motif_527 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 94.12% |
Motif_686 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 94.12% |
Motif_159 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 88.24% |
Motif_504 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 88.24% |
Motif_635 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 82.35% |
Matrix_403 | BZR1 | Not Available | | 66.15% |
Matrix_345 | POC1 | Not Available | | 64.78% |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | | 64.78% |
Matrix_338 | AP2 | Not Available | | 63.23% |
Matrix_443 | AGL15 | Not Available | | 62.97% |
Matrix_264 | ATAREB1 | Not Available | | 62.13% |
Matrix_214 | AP1 | Not Available | | 61.69% |
Matrix_498 | AT2G28710; AT3G46070; AT3G46080; ZAT7 | Not Available | | 61.66% |
Matrix_359 | FLC | Not Available | | 61.59% |
Matrix_194 | HYH; HY5 | Not Available | | 61.43% |
Matrix_24 | POC1 | Not Available | | 61.38% |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | | 61.38% |
Matrix_55 | PIF3 | Not Available | | 61.05% |
Matrix_467 | RAV1 | Not Available | | 60.98% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 60.98% |
Matrix_477 | RAV1 | Not Available | | 60.98% |
Motif_180 | AGL2 binding site motif | Binding consensus sequence of Arabidopsis AGL2 (AGAMOUS-like 2); AGL2 contains MADS domain; AGL2 binds DNA as a dimer | | 60.32% |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 59.55% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 59.53% |
Matrix_466 | PRR5 | Not Available | | 59.45% |
Matrix_153 | AP2 | Not Available | | 59.44% |
Matrix_251 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 59.26% |
Matrix_19 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 58.14% |
Matrix_499 | ARR18 | Not Available | | 57.67% |
Matrix_191 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 57.18% |
Matrix_77 | PRR5 | Not Available | | 56.62% |
Matrix_104 | PI | Not Available | | 56.12% |
Matrix_213 | ATHB22 | Not Available | | 56.05% |
Motif_664 | C1GMAUX28 | C1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -463 and -448; A/T-rich sequence | | 55.82% |
Matrix_257 | NAC050; ANAC051; anac057; NAC2 | Not Available | | 55.67% |
Matrix_369 | AT2G18300 | Not Available | | 55.62% |
Matrix_310 | AGL3 | The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein | | 55.45% |
Matrix_2 | SEP4 | Not Available | | 55.45% |
Matrix_417 | SEP4 | Not Available | | 55.45% |
Matrix_105 | SPL14 | Not Available | | 55.36% |
Matrix_222 | AGL2 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | | 55.13% |
Matrix_28 | SEP1 | Not Available | | 55.13% |
Motif_30 | HSELIKENTACIDICPR1 | HSE-like motif in -56 region of acidic PR1 gene of tobacco; not found in basic PR1 gene | | 54.86% |
Motif_156 | HBOXPVCHS15 | Binding site of two bean protein factors, KAP-1 and KAP-2; KAP-1 is a 97 kDa polypeptide; KAP-2 comprises two polypeptides of 76 kDa and 56 kDa; Elicitation of bean cell with glutathione causes a rapid increase in specific activities of KAP-1 and KAP2 | | 54.86% |
Matrix_428 | SEP4 | Not Available | | 54.78% |
Matrix_49 | FHY3/FAR1 | Not Available | | 54.56% |
Matrix_438 | AtbZIP63 | Not Available | | 54.43% |
Matrix_353 | HAT5 | Not Available | | 53.83% |
Matrix_342 | SPL14 | Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance | | 53.76% |
Motif_110 | AGATCONSENSUS | Binding consensus sequence for the product of the Arabidopsis floral homeotic gene AGAMOUS (AG); AG protein contains a region similar to the DNA binding domain of SRF and MCM1; The consensus sequence contains a CArG box; AG protein is a putative transcription factor for floral genes; MADS domain and I region of AGAMOUS are sufficient and necessary for DNA binding; Both the K domain and C region are indispensable for AG function in flower development | | 53.67% |
Matrix_514 | DYT1 | Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development | | 53.59% |
Matrix_95 | LFY | Not Available | | 53.59% |
Motif_691 | HBOXCONSENSUSPVCHS | H-box; Consensus sequence of H-boxes found in bean chs15 gene promoter; Essential for both light regulation and elicitor induction; Similar sequence was found in tobacco Tnt1 retrotransposon promoter (LTR); Tnt1 is induced by wounding and by abiotic stress; KAP-2 binds to the H-box and stimulates transcription from a promoter harboring the H-box; KAP-2 shares sequence similarity to the large subunit of mammalian Ku autoantigen | | 53.54% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 53.31% |
Matrix_304 | AtSPL3 | Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains | | 53.22% |
Matrix_440 | LFY | Not Available | | 52.83% |
Matrix_298 | RAV1 | Not Available | | 52.68% |
Matrix_413 | RAV1 | Not Available | | 52.68% |
Matrix_123 | FUSCA3 | Not Available | | 52.67% |
Motif_327 | AGAMOUSATCONSENSUS | Binding consensus sequence of Arabidopsis AGAMOUS MADS domain; MCM1 binding-sites in a-mating-type-specific promoters of Saccharomyces cerevisiae show similarities with the binding-site sequence of the AGAMOUS MADS domain; MADS domain and I region of AGAMOUS are sufficient and necessary for DNA binding; Both the K domain and C region are indispensable for AG function in flower development; See S000338 | | 52.64% |
Matrix_107 | AtSPL3 | Not Available | | 52.47% |
Motif_105 | AGL3 binding site motif | The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein | | 52.45% |
Matrix_226 | GATA1 | Not Available | | 52.24% |
Matrix_18 | AP3 | Not Available | | 52.23% |
Matrix_358 | AGL15 | Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study | | 52.22% |
Motif_346 | SND1; VND6; VND7; NST1; NST2 | Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis | | 51.92% |
Motif_455 | AG binding site motif | Nucleotide sequences recognized by the AGAMOUS MADS domain of Arabidopsis thaliana in vitro | | 51.90% |
Matrix_352 | LEC2 | Not Available | | 51.89% |
Matrix_192 | FHY3/FAR1 | Not Available | | 51.64% |
Matrix_47 | AtMYB77 | Not Available | | 51.60% |
Matrix_68 | AtMYB77 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84 | | 51.60% |
Matrix_386 | AGL1 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | | 51.50% |
Matrix_121 | SHP1 | Not Available | | 51.50% |
Matrix_458 | MGP; AT1G14580; AtIDD7; AtIDD5; AtIDD4; AtIDD12; JKD; AT5G66730 | Not Available | | 51.37% |
Matrix_39 | AP1 | Not Available | | 51.37% |
Matrix_464 | AGL15; AGL71 | Not Available | | 51.33% |
Matrix_43 | AG | Not Available | | 51.02% |
Matrix_98 | AG | Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS | | 51.02% |
Matrix_445 | AG | Not Available | | 51.02% |
Matrix_151 | ASIL1 | Not Available | | 50.90% |
Matrix_122 | ABF1; AREB2 | Not Available | | 50.84% |
Matrix_301 | PIL5 | Not Available | | 50.54% |
Motif_395 | RHE_element | Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns | | 50.33% |
Motif_390 | GLUTEBOX2OSGT2 | Box II of rice glutelin Gt2 gene family; nuclear factor binding site | | 50.30% |
Matrix_480 | BES1 | Not Available | | 50.17% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 50.16% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 50.06% |