PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_91
Name: CRF3
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_261	ATERF-1	Not Available	94.00%
Matrix_493	AT1G22985; AT1G71130	Not Available	93.85%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	85.57%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	83.41%
Matrix_355	ERF10; ERF11	Not Available	82.56%
Matrix_321	HRD	Not Available	82.20%
Matrix_374	AT5G07580; AT5G61590	Not Available	81.32%
Matrix_334	AT3G23230	Not Available	80.17%
Matrix_101	ERF5	Not Available	78.71%
Matrix_50	ATERF14; AT5G43410	Not Available	78.34%
Matrix_287	ERF2	Not Available	78.09%
Matrix_343	AT2G33710	Not Available	76.50%
Matrix_45	DRN	Not Available	73.80%
Matrix_415	WRKY27	Not Available	73.78%
Matrix_409	DEAR3	Not Available	73.46%
Matrix_506	DRNL; ATERF-4	Not Available	73.28%
Matrix_484	ATERF13	Not Available	72.41%
Matrix_57	WIN1; SHN3; SHN2	Not Available	71.92%
Matrix_243	RAP2.12; RAP2.2	Not Available	71.73%
Matrix_86	CRF5; CRF6; CRF4	Not Available	71.03%
Matrix_147	ERF3; AT1G80580	Not Available	70.92%
Matrix_288	RAP2.3	Not Available	70.91%
Matrix_169	E2F1	Not Available	70.58%
Matrix_363	RAP2.3	Not Available	70.43%
Matrix_59	AT4G00238; AT4G00250	Not Available	70.34%
Matrix_426	CRF1; CRF2	Not Available	70.19%
Matrix_37	GATA27	Not Available	69.80%
Matrix_448	ATERF6	Not Available	69.75%
Matrix_234	RAP2.3	Not Available	69.75%
Matrix_190	ATERF1	Not Available	69.71%
Matrix_151	ASIL1	Not Available	69.27%
Matrix_197	NAP	Not Available	69.12%
Matrix_433	ATERF1	Not Available	69.12%
Matrix_360	ORA59	Not Available	69.11%
Matrix_295	ERF1	Not Available	68.86%
Matrix_277	RAP2.6	Not Available	68.74%
Matrix_344	ATERF15; AT4G18450	Not Available	68.71%
Matrix_224	ERF1	Not Available	68.61%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	68.11%
Matrix_260	CAMTA3	Not Available	68.07%
Matrix_296	GBF2	Not Available	67.44%
Matrix_80	BIM1	Not Available	67.12%
Matrix_119	RRTF1	Not Available	67.11%
Matrix_146	ORA47	Not Available	66.96%
Matrix_450	SPL7	Not Available	66.76%
Matrix_378	ATERF1	Not Available	66.64%
Matrix_188	SPL4	Not Available	66.62%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	66.57%
Matrix_489	RAV1	Not Available	66.40%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	66.38%
Matrix_300	bZIP68; bZIP16	Not Available	66.05%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	65.98%
Matrix_152	EIL1; AT5G65100	Not Available	65.88%
Matrix_473	RRTF1	Not Available	65.68%
Matrix_272	DEAR4	Not Available	65.66%
Matrix_70	GATA26	Not Available	65.21%
Matrix_138	RRTF1	Not Available	65.11%
Matrix_5	AT5G51190; ERF104	Not Available	64.81%
Matrix_109	GBF3	Not Available	64.74%
Matrix_505	GATA8	Not Available	64.52%
Matrix_142	ZFP8	Not Available	64.46%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	64.05%
Matrix_171	LBD3; LBD4	Not Available	63.93%
Matrix_252	RAP2.6	Not Available	63.60%
Matrix_475	AT5G64220	Not Available	63.36%
Matrix_14	ZCW32; AT5G62610	Not Available	63.33%
Matrix_84	AtGRF6	Not Available	63.32%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	63.28%
Matrix_141	AT3G25990	Not Available	63.01%
Matrix_78	AT3G45610	Not Available	62.98%
Matrix_500	WRKY43	Not Available	62.96%
Motif_50	AtERF-7; AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses	62.88%
Matrix_418	KNAT6; KNAT2	Not Available	62.85%
Motif_60	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	62.18%
Matrix_307	RGL2; RGL3	Not Available	62.16%
Matrix_46	AT4G21895	Not Available	62.06%
Matrix_517	ERF12	Not Available	61.97%
Motif_457	AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	61.95%
Matrix_61	ATCBF3	Not Available	61.88%
Matrix_452	MYB46	Not Available	61.74%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	61.73%
Matrix_504	WRKY40	Not Available	61.72%
Matrix_331	GBF1	Not Available	61.38%
Matrix_3	WRKY48	Not Available	61.34%
Matrix_463	HAT3.1	Not Available	61.33%
Matrix_221	SPL7	Not Available	61.26%
Matrix_193	RAV1	Not Available	61.12%
Matrix_265	NGA3	Not Available	61.12%
Matrix_333	GATA3	Not Available	61.12%
Motif_625	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	61.07%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	61.02%
Matrix_259	AT1G50680; AT1G51120	Not Available	60.99%
Matrix_249	WRKY11	Not Available	60.97%
Matrix_370	WRKY50; WRKY51	Not Available	60.94%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	60.89%
Matrix_75	WRKY29	Not Available	60.89%
Matrix_423	AT3G04030	Not Available	60.48%
Matrix_336	AT5G08520	Not Available	60.46%
Matrix_92	AT1G33760	Not Available	60.18%
Motif_37	AtERF-4	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	60.18%
Matrix_17	WRKY22	Not Available	60.16%
Matrix_462	ATERF-8	Not Available	60.12%
Matrix_406	ATERF-7	Not Available	59.82%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	59.70%
Matrix_12	EIN3; EIL2	Not Available	59.16%
Matrix_436	AT3G49930; AZF1	Not Available	58.70%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	58.64%
Matrix_322	NST3; ANAC015; BRN2	Not Available	58.56%
Matrix_196	TCP20; AT5G41030	Not Available	58.46%
Matrix_99	DOF4.7	Not Available	58.38%
Matrix_206	CUC1; ANAC100	Not Available	58.05%
Matrix_341	HMGA	Not Available	57.98%
Matrix_502	AT3G13040	Not Available	57.88%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	57.79%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	57.73%
Matrix_362	DEAR3	Not Available	57.70%
Matrix_35	YAB5; YAB3	Not Available	57.58%
Matrix_384	ATWRKY17	Not Available	57.57%
Matrix_503	AT2G37430; AT3G53600	Not Available	57.46%
Matrix_143	GATA14; GATA6; GATA5	Not Available	57.38%
Matrix_248	ZFP5	Not Available	57.30%
Matrix_389	ILR3	Not Available	57.28%
Matrix_478	AT1G01250	Not Available	57.23%
Matrix_38	SPL14	Not Available	57.18%
Matrix_244	DREB2C	Not Available	57.11%
Matrix_239	AT5G04390	Not Available	57.05%
Matrix_507	TCP3	Not Available	56.95%
Matrix_394	DREB_U	Not Available	56.94%
Matrix_198	STZ; C2H2; AZF3	Not Available	56.87%
Matrix_379	RHL41	Not Available	56.82%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	56.63%
Matrix_102	WRKY21	Not Available	56.33%
Matrix_97	APRR2	Not Available	56.31%
Matrix_144	AT5G08330; AT5G23280	Not Available	56.28%
Matrix_53	MYC3	Not Available	56.27%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	56.14%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	56.12%
Matrix_308	INO	Not Available	56.06%
Matrix_373	E2FE	Not Available	55.97%
Matrix_425	TIFY2A	Not Available	55.96%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	55.87%
Matrix_120	BEE2	Not Available	55.79%
Matrix_293	WRKY38	Not Available	55.78%
Matrix_69	AT2G03500	Not Available	55.75%
Matrix_227	AT1G64620	Not Available	55.75%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	55.74%
Matrix_241	HB-1; AT5G44180	Not Available	55.73%
Matrix_162	AtPHR1	Not Available	55.70%
Matrix_416	ASL5	Not Available	55.66%
Matrix_328	AT1G76580	Not Available	55.59%
Matrix_52	ZAT18	Not Available	55.55%
Motif_191	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	55.46%
Matrix_165	KNAT1	Not Available	55.40%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	55.31%
Matrix_332	SPT; ALC	Not Available	55.25%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	55.20%
Matrix_385	DEAR4	Not Available	55.10%
Matrix_23	ANAC46	Not Available	55.06%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	55.02%
Matrix_85	SPL5	Not Available	54.94%
Matrix_253	ETT	Not Available	54.84%
Matrix_126	RBE	Not Available	54.60%
Matrix_465	MYC4	Not Available	54.45%
Matrix_330	MYC2; TT8	Not Available	54.35%
Matrix_492	ETT	Not Available	54.30%
Matrix_325	WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2	Not Available	54.29%
Matrix_380	ATMYR1	Not Available	54.27%
Matrix_41	anac058	Not Available	54.24%
Matrix_313	ATMYB65; MYB33	Not Available	54.24%
Matrix_285	DDF1	Not Available	54.23%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	54.20%
Matrix_27	ATAIB; ATNIG1	Not Available	54.14%
Matrix_220	WRKY18	Not Available	54.12%
Matrix_26	ATMYB3; MYB24	Not Available	54.11%
Motif_368	CBF1 BS in cor15a	Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs	54.06%
Matrix_329	WRKY12	Not Available	54.04%
Matrix_113	ABI5	Not Available	54.02%
Matrix_420	ANAC58	Not Available	54.00%
Matrix_40	TCP2	Not Available	53.98%
Matrix_110	ATABI4; AT3G57600	Not Available	53.94%
Matrix_226	GATA1	Not Available	53.89%
Matrix_233	MYC3	Not Available	53.64%
Matrix_491	AT1G68670; AT3G25790	Not Available	53.57%
Matrix_230	ARR11	Not Available	53.47%
Matrix_482	AT2G25650; AT4G00270	Not Available	53.44%
Matrix_177	ADOF2	Not Available	53.42%
Matrix_346	AtMYB70; MYB73	Not Available	53.35%
Matrix_282	bZIP60	Not Available	53.21%
Matrix_286	GATA7	Not Available	53.06%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	53.02%
Motif_320	AGCBOXNPGLB	AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box	53.02%
Matrix_16	AT3G04450; PHL1	Not Available	52.97%
Matrix_457	TGA2	Not Available	52.82%
Matrix_274	EDF3	Not Available	52.82%
Matrix_446	LBD16	Not Available	52.77%
Matrix_255	cdf3	Not Available	52.69%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	52.50%
Motif_318	CGCGBOXAT	CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs	52.47%
Matrix_31	SPL1	Not Available	52.36%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	52.32%
Matrix_100	AT1G48610	Not Available	52.31%
Matrix_516	ANAC038; ANAC079	Not Available	52.29%
Matrix_137	SPL1; SPL12	Not Available	52.24%
Matrix_218	TIFY2B; TIFY1	Not Available	52.19%
Matrix_323	BIM3	Not Available	52.14%
Matrix_311	TGA1	Not Available	52.08%
Matrix_209	RAP2.6	Not Available	52.03%
Matrix_476	bHLH115; bHLH34	Not Available	51.98%
Matrix_368	ATWRKY56; WRKY45; WRKY75; WRKY24	Not Available	51.87%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	51.80%
Motif_402	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	51.77%
Matrix_449	BIM2	Not Available	51.76%
Matrix_156	POC1	Not Available	51.67%
Motif_552	MRE1	MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1	51.56%
Matrix_490	AtMYB77; ATMYB44	Not Available	51.55%
Matrix_195	GATA2; GATA4	Not Available	51.40%
Matrix_128	TGA2	Not Available	51.31%
Matrix_350	ARR14	Not Available	51.17%
Matrix_297	TCP15	Not Available	51.09%
Matrix_289	WRKY25	Not Available	51.05%
Matrix_235	WRKY67; WRKY64; WRKY63; WRKY66	Not Available	51.05%
Matrix_361	AT1G25550	Not Available	50.89%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	50.85%
Matrix_470	WRKY18	Not Available	50.83%
Motif_666	MYB binding site promoter	A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes	50.75%
Motif_684	MNF1ZMPPC1	MNF1 binding site in maize Ppc1 (phosphoenolpyruvate carboxylase) gene promoter; Involved in light induction	50.60%
Matrix_437	MYC2	Not Available	50.50%
Matrix_279	HRS1	Not Available	50.27%
Matrix_421	GLK1	Not Available	50.24%
Motif_94	UP1ATMSD	Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	50.24%
Matrix_122	ABF1; AREB2	Not Available	50.20%
Matrix_157	LHY; RVE2	Not Available	50.17%
Matrix_324	AT2G01060	Not Available	50.04%
Matrix_129	ABF1	Not Available	50.01%