| Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 93.75% |
| Matrix_137 | SPL1; SPL12 | Not Available | | 86.31% |
| Matrix_450 | SPL7 | Not Available | | 73.04% |
| Matrix_328 | AT1G76580 | Not Available | | 71.46% |
| Matrix_180 | SPL1 | Not Available | | 70.51% |
| Matrix_152 | EIL1; AT5G65100 | Not Available | | 70.05% |
| Matrix_188 | SPL4 | Not Available | | 69.76% |
| Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 69.51% |
| Matrix_38 | SPL14 | Not Available | | 68.94% |
| Matrix_165 | KNAT1 | Not Available | | 68.82% |
| Matrix_504 | WRKY40 | Not Available | | 68.82% |
| Matrix_254 | MYB52 | Not Available | | 68.51% |
| Matrix_307 | RGL2; RGL3 | Not Available | | 68.28% |
| Matrix_99 | DOF4.7 | Not Available | | 68.20% |
| Matrix_221 | SPL7 | Not Available | | 68.13% |
| Matrix_415 | WRKY27 | Not Available | | 67.69% |
| Matrix_31 | SPL1 | Not Available | | 67.49% |
| Matrix_494 | OBP4 | Not Available | | 67.06% |
| Matrix_80 | BIM1 | Not Available | | 66.23% |
| Matrix_78 | AT3G45610 | Not Available | | 64.90% |
| Matrix_334 | AT3G23230 | Not Available | | 64.87% |
| Matrix_177 | ADOF2 | Not Available | | 63.96% |
| Matrix_197 | NAP | Not Available | | 63.86% |
| Matrix_249 | WRKY11 | Not Available | | 63.58% |
| Matrix_271 | AT3G16350 | Not Available | | 63.57% |
| Matrix_37 | GATA27 | Not Available | | 63.31% |
| Matrix_520 | ARR14 | Not Available | | 63.30% |
| Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 62.77% |
| Matrix_230 | ARR11 | Not Available | | 62.62% |
| Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 62.47% |
| Matrix_336 | AT5G08520 | Not Available | | 62.38% |
| Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 61.90% |
| Matrix_418 | KNAT6; KNAT2 | Not Available | | 61.72% |
| Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 61.48% |
| Matrix_500 | WRKY43 | Not Available | | 61.30% |
| Matrix_502 | AT3G13040 | Not Available | | 61.28% |
| Matrix_41 | anac058 | Not Available | | 61.28% |
| Matrix_325 | WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2 | Not Available | | 61.11% |
| Matrix_106 | AT5G47390 | Not Available | | 61.08% |
| Matrix_463 | HAT3.1 | Not Available | | 60.98% |
| Matrix_248 | ZFP5 | Not Available | | 60.97% |
| Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 60.97% |
| Matrix_236 | CCA1 | Not Available | | 60.95% |
| Matrix_226 | GATA1 | Not Available | | 60.75% |
| Matrix_460 | NAM; anac025; ATNAC2 | Not Available | | 60.71% |
| Matrix_206 | CUC1; ANAC100 | Not Available | | 60.66% |
| Matrix_416 | ASL5 | Not Available | | 60.58% |
| Matrix_315 | MYB111 | Not Available | | 60.39% |
| Matrix_411 | DOF5.6 | Not Available | | 60.39% |
| Matrix_6 | AT1G70000 | Not Available | | 60.38% |
| Matrix_350 | ARR14 | Not Available | | 60.26% |
| Matrix_157 | LHY; RVE2 | Not Available | | 60.17% |
| Matrix_469 | NAC041; NAC083 | Not Available | | 60.17% |
| Matrix_195 | GATA2; GATA4 | Not Available | | 60.07% |
| Matrix_109 | GBF3 | Not Available | | 59.75% |
| Matrix_331 | GBF1 | Not Available | | 59.28% |
| Matrix_425 | TIFY2A | Not Available | | 59.27% |
| Matrix_408 | GATA12 | Not Available | | 59.18% |
| Matrix_505 | GATA8 | Not Available | | 59.16% |
| Matrix_46 | AT4G21895 | Not Available | | 59.11% |
| Matrix_447 | RVE1 | Not Available | | 59.10% |
| Matrix_142 | ZFP8 | Not Available | | 58.99% |
| Matrix_333 | GATA3 | Not Available | | 58.95% |
| Matrix_368 | ATWRKY56; WRKY45; WRKY75; WRKY24 | Not Available | | 58.93% |
| Matrix_512 | HAT3 | Not Available | | 58.92% |
| Matrix_14 | ZCW32; AT5G62610 | Not Available | | 58.90% |
| Matrix_286 | GATA7 | Not Available | | 58.74% |
| Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 58.63% |
| Matrix_392 | ARR2 | Not Available | | 58.60% |
| Matrix_182 | ATHB6 | Not Available | | 58.59% |
| Matrix_70 | GATA26 | Not Available | | 58.42% |
| Matrix_12 | EIN3; EIL2 | Not Available | | 58.34% |
| Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 58.30% |
| Matrix_227 | AT1G64620 | Not Available | | 58.14% |
| Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 58.08% |
| Matrix_235 | WRKY67; WRKY64; WRKY63; WRKY66 | Not Available | | 58.01% |
| Matrix_379 | RHL41 | Not Available | | 57.95% |
| Matrix_126 | RBE | Not Available | | 57.85% |
| Matrix_289 | WRKY25 | Not Available | | 57.75% |
| Matrix_274 | EDF3 | Not Available | | 57.73% |
| Matrix_75 | WRKY29 | Not Available | | 57.52% |
| Matrix_67 | GLK1 | Not Available | | 57.25% |
| Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 57.12% |
| Matrix_40 | TCP2 | Not Available | | 57.08% |
| Motif_161 | SPL7; SPL4 | A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors | | 57.05% |
| Motif_674 | SPL4; SPL1; SPL5 | Molecular characterisation of the Arabidopsis SBP-box genes. Gene,A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors | | 57.02% |
| Matrix_17 | WRKY22 | Not Available | | 56.99% |
| Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 56.96% |
| Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 56.93% |
| Matrix_239 | AT5G04390 | Not Available | | 56.88% |
| Matrix_53 | MYC3 | Not Available | | 56.82% |
| Matrix_84 | AtGRF6 | Not Available | | 56.81% |
| Matrix_341 | HMGA | Not Available | | 56.81% |
| Matrix_26 | ATMYB3; MYB24 | Not Available | | 56.77% |
| Matrix_507 | TCP3 | Not Available | | 56.61% |
| Matrix_35 | YAB5; YAB3 | Not Available | | 56.53% |
| Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 56.47% |
| Matrix_33 | SPL11; SPL10; SPL2 | Not Available | | 56.43% |
| Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 56.42% |
| Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 56.34% |
| Matrix_308 | INO | Not Available | | 56.27% |
| Matrix_506 | DRNL; ATERF-4 | Not Available | | 56.18% |
| Matrix_519 | ATDOF2.4 | Not Available | | 56.11% |
| Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 55.99% |
| Motif_250 | ACGTOSGLUB1 | ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression | | 55.98% |
| Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 55.97% |
| Matrix_209 | RAP2.6 | Not Available | | 55.83% |
| Matrix_299 | PFG3 | Not Available | | 55.75% |
| Matrix_281 | TCP13 | Not Available | | 55.64% |
| Matrix_287 | ERF2 | Not Available | | 55.62% |
| Matrix_321 | HRD | Not Available | | 55.59% |
| Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 55.59% |
| Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 55.56% |
| Matrix_3 | WRKY48 | Not Available | | 55.55% |
| Matrix_489 | RAV1 | Not Available | | 55.48% |
| Matrix_404 | OBP4 | Not Available | | 55.45% |
| Motif_189 | CMSRE1IBSPOA | CMSRE-1 (Carbohydrate Metabolite Signal Responsive Element 1) found in the promoter of sweet potato sporamin A gene | | 55.41% |
| Matrix_255 | cdf3 | Not Available | | 55.39% |
| Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 55.34% |
| Matrix_337 | MYB46 | Not Available | | 55.28% |
| Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 55.23% |
| Matrix_156 | POC1 | Not Available | | 55.22% |
| Matrix_245 | WRKY62; WRKY38 | Not Available | | 55.19% |
| Matrix_69 | AT2G03500 | Not Available | | 55.17% |
| Matrix_162 | AtPHR1 | Not Available | | 54.98% |
| Matrix_436 | AT3G49930; AZF1 | Not Available | | 54.97% |
| Matrix_101 | ERF5 | Not Available | | 54.95% |
| Matrix_91 | CRF3 | Not Available | | 54.94% |
| Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 54.91% |
| Matrix_482 | AT2G25650; AT4G00270 | Not Available | | 54.72% |
| Matrix_241 | HB-1; AT5G44180 | Not Available | | 54.71% |
| Matrix_371 | MYB7; AtMYB6; AtMYB32; ATMYB4 | Not Available | | 54.60% |
| Matrix_455 | MYB111 | Not Available | | 54.44% |
| Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 54.41% |
| Matrix_347 | WOX14; WOX10 | Not Available | | 54.31% |
| Motif_322 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 54.25% |
| Matrix_261 | ATERF-1 | Not Available | | 54.16% |
| Matrix_86 | CRF5; CRF6; CRF4 | Not Available | | 54.13% |
| Matrix_451 | STY1 | Not Available | | 54.09% |
| Matrix_423 | AT3G04030 | Not Available | | 54.06% |
| Matrix_100 | AT1G48610 | Not Available | | 54.04% |
| Matrix_424 | MYB59 | Not Available | | 53.99% |
| Matrix_370 | WRKY50; WRKY51 | Not Available | | 53.94% |
| Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 53.84% |
| Motif_429 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 53.81% |
| Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 53.73% |
| Matrix_122 | ABF1; AREB2 | Not Available | | 53.72% |
| Matrix_97 | APRR2 | Not Available | | 53.62% |
| Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 53.59% |
| Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 53.41% |
| Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 53.35% |
| Matrix_229 | CDC5 | A cdc5+ homolog of a higher plant, Arabidopsis thaliana | | 53.31% |
| Motif_282 | D4GMAUX28 | D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes | | 53.17% |
| Matrix_52 | ZAT18 | Not Available | | 53.17% |
| Matrix_427 | ZAT14 | Not Available | | 53.12% |
| Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 53.05% |
| Matrix_300 | bZIP68; bZIP16 | Not Available | | 53.03% |
| Matrix_426 | CRF1; CRF2 | Not Available | | 52.97% |
| Matrix_296 | GBF2 | Not Available | | 52.71% |
| Matrix_96 | TMO6 | Not Available | | 52.62% |
| Matrix_218 | TIFY2B; TIFY1 | Not Available | | 52.54% |
| Matrix_16 | AT3G04450; PHL1 | Not Available | | 52.53% |
| Matrix_475 | AT5G64220 | Not Available | | 52.52% |
| Matrix_151 | ASIL1 | Not Available | | 52.51% |
| Matrix_144 | AT5G08330; AT5G23280 | Not Available | | 52.41% |
| Motif_286 | SEBFCONSSTPR10A | Binding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response element | | 52.39% |
| Matrix_7 | PIF4 | Not Available | | 52.39% |
| Matrix_487 | AT1G29160 | Not Available | | 52.34% |
| Matrix_93 | YAB5 | Not Available | | 52.22% |
| Matrix_211 | MYB3 | Not Available | | 52.13% |
| Motif_131 | P1BS | PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii | | 52.13% |
| Matrix_275 | ZAP1 | Characterization of a zinc-dependent transcriptional activator from Arabidopsis | | 52.11% |
| Matrix_461 | ATHB12 | Not Available | | 52.05% |
| Motif_167 | SBP-box promoter motif | Molecular characterisation of the Arabidopsis SBP-box genes | | 51.97% |
| Matrix_313 | ATMYB65; MYB33 | Not Available | | 51.87% |
| Matrix_237 | MYB55 | Not Available | | 51.82% |
| Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 51.65% |
| Matrix_384 | ATWRKY17 | Not Available | | 51.58% |
| Motif_495 | TRANSINITMONOCOTS | Context sequence of translational initiation codon in monocots | | 51.56% |
| Matrix_361 | AT1G25550 | Not Available | | 51.42% |
| Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 51.40% |
| Matrix_303 | ATWOX13 | Not Available | | 51.36% |
| Matrix_319 | TEM1 | Not Available | | 51.28% |
| Motif_568 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 51.21% |
| Matrix_174 | ZAT2 | Not Available | | 51.16% |
| Matrix_181 | Dof5.7 | Not Available | | 50.98% |
| Matrix_8 | KAN1 | Not Available | | 50.96% |
| Matrix_148 | WRKY60 | Not Available | | 50.95% |
| Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | | 50.91% |
| Matrix_72 | CDF2 | Not Available | | 50.88% |
| Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 50.75% |
| Matrix_492 | ETT | Not Available | | 50.74% |
| Motif_329 | AMMORESIIUDCRNIA1 | Motifs (IIU and IID) found in the Chlamydomonas Nia1 gene promoter; Involved in ammonium-response; Located between -231 and -219 and also between -76 and -65; Involved in Nia1 transcription activation | | 50.73% |
| Matrix_253 | ETT | Not Available | | 50.72% |
| Matrix_120 | BEE2 | Not Available | | 50.71% |
| Matrix_87 | AT1G19000 | Not Available | | 50.69% |
| Matrix_112 | TBP2; TFIID-1 | Not Available | | 50.67% |
| Motif_356 | S2FSORPL21 | S2F binding site (S2 site) in spinach RPL21 gene encoding the plastid ribosomal protein L21; S2 site (CATACAWW) is conserved in promoter region of many nuclear genes encoding plastid proteins; Leaf-specific, light-independent regulatory element; S2 site is related to but different from the light-responsive GT-1 binding site | | 50.59% |
| Matrix_210 | ARR1 | Not Available | | 50.58% |
| Matrix_169 | E2F1 | Not Available | | 50.55% |
| Matrix_4 | ARR14 | Not Available | | 50.51% |
| Matrix_129 | ABF1 | Not Available | | 50.47% |
| Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 50.33% |
| Matrix_302 | HAT1; HAT2 | Not Available | | 50.32% |
| Matrix_94 | TCP5 | Not Available | | 50.31% |
| Matrix_324 | AT2G01060 | Not Available | | 50.26% |
| Matrix_71 | ATHB7 | Not Available | | 50.22% |
| Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 50.16% |
| Matrix_327 | ARR11 | Not Available | | 50.13% |
| Matrix_472 | ZN_C2_H2 | Not Available | | 50.05% |
| Matrix_332 | SPT; ALC | Not Available | | 50.05% |
Expansion plot
Gene family finder
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Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
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